data_P7G
#

_chem_comp.id                                   P7G
_chem_comp.name                                 "7-propyl, guanosine-5'-monophosphate"
_chem_comp.type                                 "RNA linking"
_chem_comp.pdbx_type                            ATOMN
_chem_comp.formula                              "C13 H22 N5 O8 P"
_chem_comp.mon_nstd_parent_comp_id              G
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-09-25
_chem_comp.pdbx_modified_date                   2019-04-29
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       407.316
_chem_comp.one_letter_code                      G
_chem_comp.three_letter_code                    P7G
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6EK0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P7G  "C1'"  C1   C  0  1  N  N  R  244.620  277.948  204.719  -0.243   1.801  -0.408  "C1'"  P7G   1  
P7G  C2     C2   C  0  1  N  N  N  241.383  276.878  201.744  -1.106  -2.217   1.406  C2     P7G   2  
P7G  "C2'"  C3   C  0  1  N  N  R  245.107  276.539  205.038  -0.005   2.288   1.044  "C2'"  P7G   3  
P7G  "C3'"  C4   C  0  1  N  N  S  246.604  276.771  205.162   1.516   2.577   1.045  "C3'"  P7G   4  
P7G  C4     C5   C  0  1  N  N  N  243.368  277.776  202.553  -1.592  -0.281   0.125  C4     P7G   5  
P7G  "C4'"  C6   C  0  1  N  N  R  246.655  278.112  205.861   2.057   1.753  -0.139  "C4'"  P7G   6  
P7G  C5     C7   C  0  1  N  N  N  243.654  278.238  201.200  -2.824  -0.795  -0.148  C5     P7G   7  
P7G  "C5'"  C8   C  0  1  N  N  N  247.938  278.887  205.717   3.118   0.767   0.355  "C5'"  P7G   8  
P7G  C6     C9   C  0  1  N  N  N  242.684  277.972  200.138  -3.171  -2.058   0.381  C6     P7G   9  
P7G  C8     C10  C  0  1  N  N  N  245.430  278.915  202.542  -2.673   1.254  -1.204  C8     P7G  10  
P7G  N1     N1   N  0  1  N  N  N  241.598  277.291  200.493  -2.291  -2.724   1.143  N1     P7G  11  
P7G  N2     N2   N  0  1  N  N  N  240.255  276.193  202.009  -0.231  -2.925   2.190  N2     P7G  12  
P7G  N3     N3   N  0  1  N  N  N  242.234  277.101  202.761  -0.730  -1.008   0.913  N3     P7G  13  
P7G  N7     N4   N  0  1  N  N  N  244.815  278.879  201.246  -3.550   0.099  -0.966  N7     P7G  14  
P7G  N9     N5   N  0  1  N  N  N  244.408  278.167  203.269  -1.433   0.951  -0.478  N9     P7G  15  
P7G  "O2'"  O1   O  0  1  N  N  N  244.558  276.157  206.286  -0.750   3.478   1.311  "O2'"  P7G  16  
P7G  "O3'"  O2   O  0  1  N  N  N  247.307  275.740  205.817   1.761   3.969   0.839  "O3'"  P7G  17  
P7G  "O4'"  O3   O  0  1  N  N  N  245.583  278.849  205.220   0.946   1.038  -0.705  "O4'"  P7G  18  
P7G  "O5'"  O4   O  0  1  N  N  N  247.997  279.528  204.455   3.696   0.090  -0.763  "O5'"  P7G  19  
P7G  O6     O5   O  0  1  N  N  N  242.860  278.335  198.963  -4.270  -2.542   0.146  O6     P7G  20  
P7G  OP1    O6   O  0  1  N  N  N  248.729  281.124  202.737   5.987  -0.454   0.146  OP1    P7G  21  
P7G  OP2    O7   O  0  1  N  N  N  250.265  280.511  204.738   4.266  -2.300   0.171  OP2    P7G  22  
P7G  P      P1   P  0  1  N  N  N  248.908  280.795  204.184   4.851  -1.022  -0.614  P      P7G  23  
P7G  C71    C11  C  0  1  N  N  N  245.674  279.553  200.263  -4.911  -0.089  -1.476  C71    P7G  24  
P7G  C72    C12  C  0  1  N  N  N  245.007  280.701  199.535  -5.915   0.491  -0.478  C72    P7G  25  
P7G  C73    C13  C  0  1  N  N  N  245.728  280.986  198.243  -7.335   0.295  -1.011  C73    P7G  26  
P7G  OP3    O8   O  0  1  N  Y  N  248.233  281.975  205.028   5.353  -1.474  -2.075  OP3    P7G  27  
P7G  H1     H1   H  0  1  N  N  N  243.664  278.104  205.240  -0.334   2.649  -1.087  H1     P7G  28  
P7G  H2     H2   H  0  1  N  N  N  244.871  275.836  204.225  -0.253   1.507   1.762  H2     P7G  29  
P7G  H3     H3   H  0  1  N  N  N  247.010  276.901  204.148   1.967   2.245   1.981  H3     P7G  30  
P7G  H4     H4   H  0  1  N  N  N  246.432  277.973  206.929   2.489   2.418  -0.887  H4     P7G  31  
P7G  H5     H5   H  0  1  N  N  N  248.789  278.197  205.812   3.895   1.309   0.893  H5     P7G  32  
P7G  H6     H6   H  0  1  N  N  N  247.992  279.647  206.511   2.655   0.038   1.020  H6     P7G  33  
P7G  H7     H7   H  0  1  N  N  N  246.406  278.408  202.555  -2.471   1.363  -2.270  H7     P7G  34  
P7G  H8     H8   H  0  1  N  N  N  239.601  276.004  201.277   0.647  -2.562   2.386  H8     P7G  35  
P7G  H9     H9   H  0  1  N  N  N  240.071  275.873  202.938  -0.489  -3.789   2.547  H9     P7G  36  
P7G  H10    H10  H  0  1  N  N  N  242.017  276.761  203.676   0.151  -0.656   1.117  H10    P7G  37  
P7G  H11    H11  H  0  1  N  N  N  244.849  275.280  206.505  -0.634   3.822   2.208  H11    P7G  38  
P7G  H12    H12  H  0  1  N  N  N  248.231  275.959  205.854   1.390   4.540   1.526  H12    P7G  39  
P7G  H13    H13  H  0  1  N  N  N  250.911  280.579  204.045   3.517  -2.724  -0.270  H13    P7G  40  
P7G  H14    H14  H  0  1  N  N  N  245.992  278.810  199.517  -5.013   0.423  -2.433  H14    P7G  41  
P7G  H15    H15  H  0  1  N  N  N  246.557  279.945  200.789  -5.105  -1.153  -1.610  H15    P7G  42  
P7G  H16    H16  H  0  1  N  N  N  245.032  281.598  200.171  -5.812  -0.020   0.479  H16    P7G  43  
P7G  H17    H17  H  0  1  N  N  N  243.962  280.435  199.317  -5.720   1.555  -0.344  H17    P7G  44  
P7G  H18    H18  H  0  1  N  N  N  245.235  281.821  197.724  -7.438   0.807  -1.969  H18    P7G  45  
P7G  H19    H19  H  0  1  N  N  N  246.773  281.254  198.458  -7.529  -0.769  -1.145  H19    P7G  46  
P7G  H20    H20  H  0  1  N  N  N  245.703  280.091  197.604  -8.050   0.708  -0.300  H20    P7G  47  
P7G  H21    H21  H  0  1  N  N  N  247.869  282.621  204.434   6.050  -2.144  -2.061  H21    P7G  48  
P7G  H22    H22  H  0  1  N  N  N  245.545  279.941  202.921  -3.128   2.164  -0.811  H22    P7G  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P7G  C73    C72    SING  N  N   1  
P7G  O6     C6     DOUB  N  N   2  
P7G  C72    C71    SING  N  N   3  
P7G  C6     N1     SING  N  N   4  
P7G  C6     C5     SING  N  N   5  
P7G  C71    N7     SING  N  N   6  
P7G  N1     C2     DOUB  N  N   7  
P7G  C5     N7     SING  N  N   8  
P7G  C5     C4     DOUB  N  N   9  
P7G  N7     C8     SING  N  N  10  
P7G  C2     N2     SING  N  N  11  
P7G  C2     N3     SING  N  N  12  
P7G  C8     N9     SING  N  N  13  
P7G  C4     N3     SING  N  N  14  
P7G  C4     N9     SING  N  N  15  
P7G  OP1    P      DOUB  N  N  16  
P7G  N9     "C1'"  SING  N  N  17  
P7G  P      "O5'"  SING  N  N  18  
P7G  P      OP2    SING  N  N  19  
P7G  "O5'"  "C5'"  SING  N  N  20  
P7G  "C1'"  "C2'"  SING  N  N  21  
P7G  "C1'"  "O4'"  SING  N  N  22  
P7G  "C2'"  "C3'"  SING  N  N  23  
P7G  "C2'"  "O2'"  SING  N  N  24  
P7G  "C3'"  "O3'"  SING  N  N  25  
P7G  "C3'"  "C4'"  SING  N  N  26  
P7G  "O4'"  "C4'"  SING  N  N  27  
P7G  "C5'"  "C4'"  SING  N  N  28  
P7G  P      OP3    SING  N  N  29  
P7G  "C1'"  H1     SING  N  N  30  
P7G  "C2'"  H2     SING  N  N  31  
P7G  "C3'"  H3     SING  N  N  32  
P7G  "C4'"  H4     SING  N  N  33  
P7G  "C5'"  H5     SING  N  N  34  
P7G  "C5'"  H6     SING  N  N  35  
P7G  C8     H7     SING  N  N  36  
P7G  N2     H8     SING  N  N  37  
P7G  N2     H9     SING  N  N  38  
P7G  N3     H10    SING  N  N  39  
P7G  "O2'"  H11    SING  N  N  40  
P7G  "O3'"  H12    SING  N  N  41  
P7G  OP2    H13    SING  N  N  42  
P7G  C71    H14    SING  N  N  43  
P7G  C71    H15    SING  N  N  44  
P7G  C72    H16    SING  N  N  45  
P7G  C72    H17    SING  N  N  46  
P7G  C73    H18    SING  N  N  47  
P7G  C73    H19    SING  N  N  48  
P7G  C73    H20    SING  N  N  49  
P7G  OP3    H21    SING  N  N  50  
P7G  C8     H22    SING  N  N  51  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P7G  InChI             InChI                 1.03   "InChI=1S/C13H22N5O8P/c1-2-3-17-5-18(10-7(17)11(21)16-13(14)15-10)12-9(20)8(19)6(26-12)4-25-27(22,23)24/h6,8-9,12,19-20H,2-5H2,1H3,(H2,22,23,24)(H3,14,15,16,21)/t6-,8-,9-,12-/m1/s1"  
P7G  InChIKey          InChI                 1.03   RYXOSWCCKYWJKM-WOUKDFQISA-N  
P7G  SMILES_CANONICAL  CACTVS                3.385  "CCCN1CN([C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O)C3=C1C(=O)N=C(N)N3"  
P7G  SMILES            CACTVS                3.385  "CCCN1CN([CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O)C3=C1C(=O)N=C(N)N3"  
P7G  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCCN1CN(C2=C1C(=O)N=C(N2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O"  
P7G  SMILES            "OpenEye OEToolkits"  2.0.6  "CCCN1CN(C2=C1C(=O)N=C(N2)N)C3C(C(C(O3)COP(=O)(O)O)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          P7G
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-7-propyl-3,8-dihydropurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P7G  "Create component"        2017-09-25  EBI   
P7G  "Initial release"         2018-01-24  RCSB  
P7G  "Modify one letter code"  2019-04-29  EBI   
##
