data_P2G
#

_chem_comp.id                                   P2G
_chem_comp.name                                 
;(2S,4R,6R,6AS)-4-(2-AMINO-6-OXO-1,6-DIHYDROPURIN-9-YL)-6-(HYDROXYMETHYL)-TETRAHYDROFURO[3,4-D][1,3]DIOXOL-2-YLPHOSPHONI
C ACID
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H14 N5 O8 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "GUANOSINE-2',3'-O-METHYLIDENEPHOSPHONATE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2005-08-04
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       375.231
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    P2G
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2AI3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P2G  O6      O6      O  0  1  N  N  N  68.613  -51.411   96.255  -5.909   0.086   0.585  O6      P2G   1  
P2G  C6      C6      C  0  1  Y  N  N  68.008  -50.353   96.424  -4.794   0.434   0.237  C6      P2G   2  
P2G  N1      N1      N  0  1  Y  N  N  66.615  -50.331   96.208  -4.564   1.697  -0.186  N1      P2G   3  
P2G  C2      C2      C  0  1  Y  N  N  65.865  -49.157   96.418  -3.315   2.075  -0.579  C2      P2G   4  
P2G  N2      N2      N  0  1  N  N  N  64.576  -49.117   96.105  -3.112   3.362  -1.009  N2      P2G   5  
P2G  N3      N3      N  0  1  Y  N  N  66.539  -48.069   96.849  -2.297   1.243  -0.553  N3      P2G   6  
P2G  C4      C4      C  0  1  Y  N  N  67.874  -48.061   97.057  -2.448  -0.022  -0.141  C4      P2G   7  
P2G  C5      C5      C  0  1  Y  N  N  68.667  -49.195   96.845  -3.708  -0.471   0.270  C5      P2G   8  
P2G  N7      N7      N  0  1  Y  N  N  69.932  -48.854   97.069  -3.574  -1.771   0.630  N7      P2G   9  
P2G  C8      C8      C  0  1  Y  N  N  69.936  -47.567   97.409  -2.336  -2.137   0.468  C8      P2G  10  
P2G  N9      N9      N  0  1  Y  N  N  68.697  -47.077   97.428  -1.602  -1.089  -0.007  N9      P2G  11  
P2G  "C1'"   "C1'"   C  0  1  N  N  R  68.387  -45.810   98.139  -0.170  -1.104  -0.317  "C1'"   P2G  12  
P2G  "O4'"   "O4'"   O  0  1  N  N  N  68.077  -46.205   99.487   0.279  -2.455  -0.554  "O4'"   P2G  13  
P2G  "C2'"   "C2'"   C  0  1  N  N  R  67.232  -44.917   97.685   0.648  -0.618   0.899  "C2'"   P2G  14  
P2G  "O2'"   "O2'"   O  0  1  N  N  N  67.608  -43.610   97.209   1.153   0.719   0.626  "O2'"   P2G  15  
P2G  C1      C1      C  0  1  N  N  S  67.163  -42.618   98.160   2.400   0.513  -0.071  C1      P2G  16  
P2G  P       P       P  0  1  N  N  N  66.693  -41.043   97.339   3.461   1.989   0.068  P       P2G  17  
P2G  O3      O3      O  0  1  N  N  N  65.904  -40.067   98.339   4.877   1.702  -0.642  O3      P2G  18  
P2G  O4      O4      O  0  1  N  N  N  65.680  -41.487   96.173   2.742   3.236  -0.653  O4      P2G  19  
P2G  O2      O2      O  0  1  N  N  N  67.901  -40.359   96.816   3.681   2.306   1.497  O2      P2G  20  
P2G  "O3'"   "O3'"   O  0  1  N  N  N  66.078  -43.289   98.829   3.011  -0.610   0.599  "O3'"   P2G  21  
P2G  "C3'"   "C3'"   C  0  1  N  N  R  66.403  -44.690   98.936   1.920  -1.513   0.872  "C3'"   P2G  22  
P2G  "C4'"   "C4'"   C  0  1  N  N  R  67.355  -45.103  100.055   1.709  -2.420  -0.359  "C4'"   P2G  23  
P2G  "C5'"   "C5'"   C  0  1  N  N  N  66.650  -45.516  101.350   2.243  -3.828  -0.083  "C5'"   P2G  24  
P2G  "O5'"   "O5'"   O  0  1  N  N  N  67.629  -46.042  102.250   2.079  -4.636  -1.250  "O5'"   P2G  25  
P2G  HN1     HN1     H  0  1  N  N  N  66.141  -51.178   95.894  -5.293   2.336  -0.217  HN1     P2G  26  
P2G  HN21    1HN2    H  0  0  N  N  N  64.033  -48.267   96.257  -2.227   3.646  -1.288  HN21    P2G  27  
P2G  HN22    2HN2    H  0  0  N  N  N  64.106  -49.886   96.583  -3.853   3.986  -1.037  HN22    P2G  28  
P2G  H8      H8      H  0  1  N  N  N  70.843  -46.985   97.643  -1.947  -3.123   0.678  H8      P2G  29  
P2G  "H1'"   "H1'"   H  0  1  N  N  N  69.281  -45.172   97.949   0.035  -0.478  -1.186  "H1'"   P2G  30  
P2G  "H2'"   "H2'"   H  0  1  N  N  N  66.725  -45.426   96.832   0.095  -0.675   1.837  "H2'"   P2G  31  
P2G  H1      H1      H  0  1  N  N  N  67.948  -42.286   98.878   2.216   0.276  -1.119  H1      P2G  32  
P2G  HO3     HO3     H  0  1  N  N  N  65.661  -39.252   97.914   4.689   1.501  -1.569  HO3     P2G  33  
P2G  HO4     HO4     H  0  1  N  N  N  65.437  -40.672   95.748   3.334   3.995  -0.556  HO4     P2G  34  
P2G  "H3'"   "H3'"   H  0  1  N  N  N  65.450  -45.245   99.102   2.062  -2.078   1.793  "H3'"   P2G  35  
P2G  "H4'"   "H4'"   H  0  1  N  N  N  68.000  -44.250  100.370   2.200  -1.994  -1.234  "H4'"   P2G  36  
P2G  "H5'1"  "1H5'"  H  0  0  N  N  N  66.057  -44.684  101.799   3.300  -3.771   0.174  "H5'1"  P2G  37  
P2G  "H5'2"  "2H5'"  H  0  0  N  N  N  65.807  -46.224  101.171   1.690  -4.270   0.746  "H5'2"  P2G  38  
P2G  "H5'"   "H5'"   H  0  1  N  N  N  67.191  -46.298  103.053   2.427  -5.512  -1.034  "H5'"   P2G  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P2G  O6     C6      DOUB  N  N   1  
P2G  C6     N1      SING  Y  N   2  
P2G  C6     C5      SING  Y  N   3  
P2G  N1     C2      SING  Y  N   4  
P2G  N1     HN1     SING  N  N   5  
P2G  C2     N2      SING  N  N   6  
P2G  C2     N3      DOUB  Y  N   7  
P2G  N2     HN21    SING  N  N   8  
P2G  N2     HN22    SING  N  N   9  
P2G  N3     C4      SING  Y  N  10  
P2G  C4     C5      DOUB  Y  N  11  
P2G  C4     N9      SING  Y  N  12  
P2G  C5     N7      SING  Y  N  13  
P2G  N7     C8      DOUB  Y  N  14  
P2G  C8     N9      SING  Y  N  15  
P2G  C8     H8      SING  N  N  16  
P2G  N9     "C1'"   SING  N  N  17  
P2G  "C1'"  "O4'"   SING  N  N  18  
P2G  "C1'"  "C2'"   SING  N  N  19  
P2G  "C1'"  "H1'"   SING  N  N  20  
P2G  "O4'"  "C4'"   SING  N  N  21  
P2G  "C2'"  "O2'"   SING  N  N  22  
P2G  "C2'"  "C3'"   SING  N  N  23  
P2G  "C2'"  "H2'"   SING  N  N  24  
P2G  "O2'"  C1      SING  N  N  25  
P2G  C1     P       SING  N  N  26  
P2G  C1     "O3'"   SING  N  N  27  
P2G  C1     H1      SING  N  N  28  
P2G  P      O3      SING  N  N  29  
P2G  P      O4      SING  N  N  30  
P2G  P      O2      DOUB  N  N  31  
P2G  O3     HO3     SING  N  N  32  
P2G  O4     HO4     SING  N  N  33  
P2G  "O3'"  "C3'"   SING  N  N  34  
P2G  "C3'"  "C4'"   SING  N  N  35  
P2G  "C3'"  "H3'"   SING  N  N  36  
P2G  "C4'"  "C5'"   SING  N  N  37  
P2G  "C4'"  "H4'"   SING  N  N  38  
P2G  "C5'"  "O5'"   SING  N  N  39  
P2G  "C5'"  "H5'1"  SING  N  N  40  
P2G  "C5'"  "H5'2"  SING  N  N  41  
P2G  "O5'"  "H5'"   SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P2G  SMILES            ACDLabs               10.04  "O=C4NC(=Nc1c4ncn1C3OC(C2OC(OC23)P(=O)(O)O)CO)N"  
P2G  SMILES_CANONICAL  CACTVS                3.341  "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@H]4O[C@@H](O[C@@H]34)[P](O)(O)=O"  
P2G  SMILES            CACTVS                3.341  "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH]4O[CH](O[CH]34)[P](O)(O)=O"  
P2G  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc2c(n1[C@H]3[C@H]4[C@@H]([C@H](O3)CO)O[C@@H](O4)P(=O)(O)O)N=C(NC2=O)N"  
P2G  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc2c(n1C3C4C(C(O3)CO)OC(O4)P(=O)(O)O)N=C(NC2=O)N"  
P2G  InChI             InChI                 1.03   "InChI=1S/C11H14N5O8P/c12-10-14-7-4(8(18)15-10)13-2-16(7)9-6-5(3(1-17)22-9)23-11(24-6)25(19,20)21/h2-3,5-6,9,11,17H,1H2,(H2,19,20,21)(H3,12,14,15,18)/t3-,5-,6-,9-,11+/m1/s1"  
P2G  InChIKey          InChI                 1.03   GKAPYWCOOQBBHV-KXSYMAMXSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P2G  "SYSTEMATIC NAME"  ACDLabs               10.04  "2',3'-O-(phosphonomethylidene)guanosine"  
P2G  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[(2S,3aR,4R,6R,6aR)-6-(2-amino-6-oxo-1H-purin-9-yl)-4-(hydroxymethyl)-3a,4,6,6a-tetrahydrofuro[4,3-d][1,3]dioxol-2-yl]phosphonic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P2G  "Create component"   2005-08-04  RCSB  
P2G  "Modify descriptor"  2011-06-04  RCSB  
P2G  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     P2G
_pdbx_chem_comp_synonyms.name        "GUANOSINE-2',3'-O-METHYLIDENEPHOSPHONATE"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
