data_IUG
# 
_chem_comp.id                                    IUG 
_chem_comp.name                                  "1-(2-NITROPHENYL)ETHYL UDP-GALACTOSE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H30 N3 O19 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2012-12-17 
_chem_comp.pdbx_modified_date                    2013-01-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        702.430 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IUG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ZGF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IUG C1     C1     C 0 1 N N R -11.722 17.873 -23.302 3.451  -3.204 0.235  C1     IUG 1  
IUG O1     O1     O 0 1 N N N -11.878 19.275 -23.138 2.077  -2.836 0.098  O1     IUG 2  
IUG C2     C2     C 0 1 N N R -10.510 17.420 -22.494 3.611  -4.144 1.432  C2     IUG 3  
IUG O2     O2     O 0 1 N N N -10.769 17.472 -21.075 2.779  -5.292 1.252  O2     IUG 4  
IUG C3     C3     C 0 1 N N S -9.324  18.284 -22.898 3.197  -3.407 2.710  C3     IUG 5  
IUG O3     O3     O 0 1 N N N -8.163  17.866 -22.174 3.412  -4.254 3.841  O3     IUG 6  
IUG C4     C4     C 0 1 N N R -9.092  18.166 -24.407 4.043  -2.138 2.851  C4     IUG 7  
IUG O4     O4     O 0 1 N N N -8.549  16.887 -24.776 5.419  -2.495 2.996  O4     IUG 8  
IUG C5     C5     C 0 1 N N R -10.376 18.371 -25.211 3.866  -1.275 1.599  C5     IUG 9  
IUG O5     O5     O 0 1 N N N -11.487 17.629 -24.689 4.240  -2.030 0.445  O5     IUG 10 
IUG C6     C6     C 0 1 N N N -10.135 17.879 -26.626 4.755  -0.034 1.706  C6     IUG 11 
IUG O6     O6     O 0 1 N N N -11.305 18.027 -27.422 4.504  0.828  0.594  O6     IUG 12 
IUG "C1'"  "C1'"  C 0 1 N N R -16.172 19.623 -16.214 -6.314 -0.044 0.514  "C1'"  IUG 13 
IUG "C2'"  "C2'"  C 0 1 N N R -16.982 18.629 -17.021 -6.998 0.271  -0.841 "C2'"  IUG 14 
IUG "O2'"  "O2'"  O 0 1 N N N -16.866 17.335 -16.416 -8.411 0.075  -0.757 "O2'"  IUG 15 
IUG "C3'"  "C3'"  C 0 1 N N S -16.261 18.587 -18.334 -6.350 -0.772 -1.783 "C3'"  IUG 16 
IUG "O3'"  "O3'"  O 0 1 N N N -16.523 17.353 -19.008 -7.206 -1.906 -1.938 "O3'"  IUG 17 
IUG "C4'"  "C4'"  C 0 1 N N R -14.815 18.731 -17.875 -5.048 -1.174 -1.062 "C4'"  IUG 18 
IUG "O4'"  "O4'"  O 0 1 N N N -14.863 19.663 -16.796 -4.963 -0.387 0.137  "O4'"  IUG 19 
IUG "C5'"  "C5'"  C 0 1 N N N -13.862 19.203 -18.955 -3.845 -0.884 -1.962 "C5'"  IUG 20 
IUG "O5'"  "O5'"  O 0 1 N N N -14.358 20.409 -19.525 -2.655 -1.366 -1.335 "O5'"  IUG 21 
IUG OAA    OAA    O 0 1 N N N -18.321 24.634 -16.465 -6.323 4.331  3.678  OAA    IUG 22 
IUG OAB    OAB    O 0 1 N N N -18.447 20.411 -14.959 -5.075 2.264  -0.048 OAB    IUG 23 
IUG OAC    OAC    O 0 1 N N N -12.176 14.545 -29.569 6.785  3.869  1.027  OAC    IUG 24 
IUG OAD    OAD    O 0 1 N N N -15.606 19.106 -21.368 -1.212 -1.833 -3.353 OAD    IUG 25 
IUG OAE    OAE    O 0 1 N N N -13.114 21.188 -24.243 2.173  -1.411 -1.984 OAE    IUG 26 
IUG OAK    OAK    O 0 1 N N N -12.352 14.637 -31.667 7.054  5.603  -0.144 OAK    IUG 27 
IUG OAL    OAL    O 0 1 N N N -15.559 21.721 -21.256 -0.801 0.328  -2.115 OAL    IUG 28 
IUG OAM    OAM    O 0 1 N N N -14.350 18.943 -23.786 1.398  -3.799 -2.253 OAM    IUG 29 
IUG CAN    CAN    C 0 1 Y N N -9.147  18.226 -31.130 3.679  3.170  -2.622 CAN    IUG 30 
IUG CAO    CAO    C 0 1 Y N N -9.341  17.283 -32.128 4.304  4.386  -2.844 CAO    IUG 31 
IUG CAP    CAP    C 0 1 Y N N -9.867  18.131 -29.944 3.997  2.409  -1.509 CAP    IUG 32 
IUG CAQ    CAQ    C 0 1 Y N N -10.252 16.255 -31.929 5.249  4.852  -1.958 CAQ    IUG 33 
IUG CAR    CAR    C 0 1 N N N -16.644 23.203 -17.119 -7.019 2.174  3.376  CAR    IUG 34 
IUG CAS    CAS    C 0 1 N N N -16.123 21.914 -17.034 -7.007 1.089  2.573  CAS    IUG 35 
IUG CAT    CAT    C 0 1 N N N -11.527 17.037 -28.455 5.287  2.024  0.598  CAT    IUG 36 
IUG NAW    NAW    N 0 1 N N N -18.397 22.522 -15.703 -5.668 3.343  1.793  NAW    IUG 37 
IUG OBC    OBC    O 0 1 N N N -13.493 20.412 -21.855 -0.113 -1.992 -1.086 OBC    IUG 38 
IUG CBD    CBD    C 0 1 Y N N -10.787 17.102 -29.741 4.943  2.853  -0.613 CBD    IUG 39 
IUG CBE    CBE    C 0 1 Y N N -10.972 16.150 -30.740 5.580  4.089  -0.825 CBE    IUG 40 
IUG CBF    CBF    C 0 1 N N N -17.812 23.487 -16.423 -6.326 3.340  2.970  CBF    IUG 41 
IUG CBG    CBG    C 0 1 N N N -17.873 21.284 -15.640 -5.672 2.247  1.011  CBG    IUG 42 
IUG NBQ    NBQ    N 0 1 N N N -16.751 20.975 -16.312 -6.328 1.133  1.385  NBQ    IUG 43 
IUG NBR    NBR    N 1 1 N N N -11.876 15.076 -30.633 6.501  4.534  0.047  NBR    IUG 44 
IUG PBS    PBS    P 0 1 N N N -14.883 20.387 -21.041 -1.196 -1.229 -2.002 PBS    IUG 45 
IUG PBT    PBT    P 0 1 N N N -13.309 19.957 -23.386 1.401  -2.486 -1.321 PBT    IUG 46 
IUG H1     H1     H 0 1 N N N -12.616 17.334 -22.955 3.785  -3.709 -0.671 H1     IUG 47 
IUG H2     H2     H 0 1 N N N -10.284 16.381 -22.778 4.652  -4.458 1.513  H2     IUG 48 
IUG HO2    HO2    H 0 1 N N N -9.997  17.185 -20.601 2.982  -5.805 0.458  HO2    IUG 49 
IUG H3     H3     H 0 1 N N N -9.556  19.333 -22.661 2.142  -3.139 2.650  H3     IUG 50 
IUG HO3    HO3    H 0 1 N N N -7.422  18.404 -22.425 2.911  -5.081 3.814  HO3    IUG 51 
IUG H4     H4     H 0 1 N N N -8.382  18.954 -24.700 3.717  -1.579 3.728  H4     IUG 52 
IUG HO4    HO4    H 0 1 N N N -8.421  16.856 -25.717 5.602  -3.047 3.769  HO4    IUG 53 
IUG H5     H5     H 0 1 N N N -10.614 19.445 -25.238 2.824  -0.969 1.512  H5     IUG 54 
IUG H6     H6     H 0 1 N N N -9.318  18.462 -27.076 4.531  0.494  2.633  H6     IUG 55 
IUG H6A    H6A    H 0 1 N N N -9.853  16.816 -26.594 5.802  -0.335 1.703  H6A    IUG 56 
IUG "H1'"  "H1'"  H 0 1 N N N -16.126 19.301 -15.163 -6.802 -0.888 1.002  "H1'"  IUG 57 
IUG "H2'"  "H2'"  H 0 1 N N N -18.026 18.956 -17.137 -6.767 1.286  -1.166 "H2'"  IUG 58 
IUG "HO2'" "HO2'" H 0 0 N N N -17.371 16.705 -16.916 -8.884 0.260  -1.580 "HO2'" IUG 59 
IUG "H3'"  "H3'"  H 0 1 N N N -16.546 19.450 -18.954 -6.128 -0.326 -2.752 "H3'"  IUG 60 
IUG "HO3'" "HO3'" H 0 0 N N N -16.060 17.340 -19.838 -8.064 -1.700 -2.333 "HO3'" IUG 61 
IUG "H4'"  "H4'"  H 0 1 N N N -14.469 17.754 -17.506 -5.077 -2.234 -0.808 "H4'"  IUG 62 
IUG "H5'"  "H5'"  H 0 1 N N N -12.870 19.385 -18.516 -3.979 -1.385 -2.921 "H5'"  IUG 63 
IUG "H5'A" "H5'A" H 0 0 N N N -13.782 18.433 -19.736 -3.762 0.191  -2.122 "H5'A" IUG 64 
IUG HOAK   HOAK   H 0 0 N N N -12.919 13.902 -31.468 7.709  5.882  0.510  HOAK   IUG 65 
IUG HOAL   HOAL   H 0 0 N N N -16.433 21.582 -21.601 -0.771 0.789  -1.265 HOAL   IUG 66 
IUG HOAM   HOAM   H 0 0 N N N -14.781 19.229 -24.583 0.910  -4.545 -1.880 HOAM   IUG 67 
IUG HAN    HAN    H 0 1 N N N -8.440  19.030 -31.273 2.935  2.814  -3.320 HAN    IUG 68 
IUG HAO    HAO    H 0 1 N N N -8.787  17.348 -33.053 4.048  4.971  -3.715 HAO    IUG 69 
IUG HAP    HAP    H 0 1 N N N -9.711  18.866 -29.168 3.502  1.464  -1.343 HAP    IUG 70 
IUG HAQ    HAQ    H 0 1 N N N -10.406 15.524 -32.709 5.736  5.800  -2.133 HAQ    IUG 71 
IUG HAR    HAR    H 0 1 N N N -16.153 23.962 -17.710 -7.555 2.155  4.314  HAR    IUG 72 
IUG HAS    HAS    H 0 1 N N N -15.208 21.670 -17.553 -7.530 0.191  2.866  HAS    IUG 73 
IUG HAT    HAT    H 0 1 N N N -11.294 16.059 -28.008 5.075  2.595  1.502  HAT    IUG 74 
IUG HATA   HATA   H 0 0 N N N -12.597 17.080 -28.706 6.346  1.765  0.572  HATA   IUG 75 
IUG HNAW   HNAW   H 0 0 N N N -19.239 22.725 -15.203 -5.191 4.137  1.508  HNAW   IUG 76 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IUG O5    C1     SING N N 1  
IUG C1    O1     SING N N 2  
IUG C1    C2     SING N N 3  
IUG C1    H1     SING N N 4  
IUG PBT   O1     SING N N 5  
IUG C3    C2     SING N N 6  
IUG C2    O2     SING N N 7  
IUG C2    H2     SING N N 8  
IUG O2    HO2    SING N N 9  
IUG C4    C3     SING N N 10 
IUG C3    O3     SING N N 11 
IUG C3    H3     SING N N 12 
IUG O3    HO3    SING N N 13 
IUG C5    C4     SING N N 14 
IUG O4    C4     SING N N 15 
IUG C4    H4     SING N N 16 
IUG O4    HO4    SING N N 17 
IUG C6    C5     SING N N 18 
IUG C5    O5     SING N N 19 
IUG C5    H5     SING N N 20 
IUG O6    C6     SING N N 21 
IUG C6    H6     SING N N 22 
IUG C6    H6A    SING N N 23 
IUG CAT   O6     SING N N 24 
IUG "C2'" "C1'"  SING N N 25 
IUG "O4'" "C1'"  SING N N 26 
IUG NBQ   "C1'"  SING N N 27 
IUG "C1'" "H1'"  SING N N 28 
IUG "C3'" "C2'"  SING N N 29 
IUG "C2'" "O2'"  SING N N 30 
IUG "C2'" "H2'"  SING N N 31 
IUG "O2'" "HO2'" SING N N 32 
IUG "O3'" "C3'"  SING N N 33 
IUG "C3'" "C4'"  SING N N 34 
IUG "C3'" "H3'"  SING N N 35 
IUG "O3'" "HO3'" SING N N 36 
IUG "C5'" "C4'"  SING N N 37 
IUG "C4'" "O4'"  SING N N 38 
IUG "C4'" "H4'"  SING N N 39 
IUG "O5'" "C5'"  SING N N 40 
IUG "C5'" "H5'"  SING N N 41 
IUG "C5'" "H5'A" SING N N 42 
IUG PBS   "O5'"  SING N N 43 
IUG OAA   CBF    DOUB N N 44 
IUG CBG   OAB    DOUB N N 45 
IUG NBR   OAC    DOUB N N 46 
IUG OAD   PBS    DOUB N N 47 
IUG OAE   PBT    DOUB N N 48 
IUG OAK   NBR    SING N N 49 
IUG OAK   HOAK   SING N N 50 
IUG OAL   PBS    SING N N 51 
IUG OAL   HOAL   SING N N 52 
IUG OAM   PBT    SING N N 53 
IUG OAM   HOAM   SING N N 54 
IUG CAO   CAN    DOUB Y N 55 
IUG CAN   CAP    SING Y N 56 
IUG CAN   HAN    SING N N 57 
IUG CAO   CAQ    SING Y N 58 
IUG CAO   HAO    SING N N 59 
IUG CAP   CBD    DOUB Y N 60 
IUG CAP   HAP    SING N N 61 
IUG CAQ   CBE    DOUB Y N 62 
IUG CAQ   HAQ    SING N N 63 
IUG CAR   CAS    DOUB N N 64 
IUG CAR   CBF    SING N N 65 
IUG CAR   HAR    SING N N 66 
IUG CAS   NBQ    SING N N 67 
IUG CAS   HAS    SING N N 68 
IUG CBD   CAT    SING N N 69 
IUG CAT   HAT    SING N N 70 
IUG CAT   HATA   SING N N 71 
IUG CBF   NAW    SING N N 72 
IUG NAW   CBG    SING N N 73 
IUG PBT   OBC    SING N N 74 
IUG OBC   PBS    SING N N 75 
IUG CBE   CBD    SING Y N 76 
IUG CBE   NBR    SING N N 77 
IUG NBQ   CBG    SING N N 78 
IUG NAW   HNAW   SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IUG SMILES           ACDLabs              12.01 "O=C1C=CN(C(=O)N1)C2OC(C(O)C2O)COP(=O)(OP(=O)(OC3OC(C(O)C(O)C3O)COCc4ccccc4N(=O)O)O)O" 
IUG InChI            InChI                1.03  
;InChI=1S/C22H31N3O19P2/c26-14-5-6-24(22(32)23-14)20-18(30)16(28)13(41-20)9-40-45(35,36)44-46(37,38)43-21-19(31)17(29)15(27)12(42-21)8-39-7-10-3-1-2-4-11(10)25(33)34/h1-6,12-13,15-21,25,27-31H,7-9H2,(H,33,34)(H,35,36)(H,37,38)(H,23,26,32)/t12-,13-,15+,16-,17+,18-,19-,20-,21-/m1/s1
;
IUG InChIKey         InChI                1.03  NGBDXGVIYRIOPC-DZEIOYJHSA-N 
IUG SMILES_CANONICAL CACTVS               3.370 "O[C@H]1[C@@H](O)[C@@H](COCc2ccccc2[N+](O)=O)O[C@H](O[P](O)(=O)O[P](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)N4C=CC(=O)NC4=O)[C@@H]1O" 
IUG SMILES           CACTVS               3.370 "O[CH]1[CH](O)[CH](COCc2ccccc2[N+](O)=O)O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)N4C=CC(=O)NC4=O)[CH]1O" 
IUG SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)COC[C@@H]2[C@@H]([C@@H]([C@H]([C@H](O2)OP(=O)(O)OP(=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)N4C=CC(=O)NC4=O)O)O)O)O)O)[N+](=O)O" 
IUG SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)COCC2C(C(C(C(O2)OP(=O)(O)OP(=O)(O)OCC3C(C(C(O3)N4C=CC(=O)NC4=O)O)O)O)O)O)[N+](=O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
IUG "SYSTEMATIC NAME" ACDLabs              12.01 
;[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-[({2-[hydroxy(oxido)-lambda~5~-azanyl]benzyl}oxy)methyl]tetrahydro-2H-pyran-2-yl dihydrogen diphosphate (non-preferred name)
;
IUG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"[2-[[(2R,3R,4S,5R,6R)-6-[[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,4,5-tris(oxidanyl)oxan-2-yl]methoxymethyl]phenyl]-oxidanyl-oxidanylidene-azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IUG "Create component" 2012-12-17 EBI  
IUG "Initial release"  2013-01-18 RCSB 
# 
