data_F6G
#

_chem_comp.id                                   F6G
_chem_comp.name                                 "6-amino-3-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,4-dihydro-1,3,5-triazin-2(1H)-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C8 H17 N4 O13 P3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-03-05
_chem_comp.pdbx_modified_date                   2019-06-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       470.161
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    F6G
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6CM2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
F6G  C2     C1   C  0  1  N  N  N  57.357  38.898  138.337  -5.266  -0.584   0.608  C2     F6G   1  
F6G  C4     C2   C  0  1  N  N  N  59.562  39.215  139.119  -6.737  -2.448   0.375  C4     F6G   2  
F6G  C6     C3   C  0  1  N  N  N  58.837  37.112  138.482  -5.640  -1.587  -1.564  C6     F6G   3  
F6G  N4     N1   N  0  1  N  N  N  60.589  40.100  139.624  -7.586  -3.336   0.992  N4     F6G   4  
F6G  N03    N2   N  0  1  N  N  N  59.825  37.930  138.955  -6.549  -2.540  -0.910  N03    F6G   5  
F6G  N1     N3   N  0  1  N  N  N  57.569  37.551  138.187  -4.990  -0.576  -0.714  N1     F6G   6  
F6G  "C1'"  C4   C  0  1  N  N  R  56.579  36.718  137.643  -4.070   0.410  -1.285  "C1'"  F6G   7  
F6G  "C2'"  C5   C  0  1  N  N  N  56.749  36.335  136.124  -4.616   1.840  -1.074  "C2'"  F6G   8  
F6G  "C3'"  C6   C  0  1  N  N  S  56.301  35.141  135.982  -3.354   2.685  -0.789  "C3'"  F6G   9  
F6G  "O3'"  O1   O  0  1  N  N  N  54.830  34.990  135.803  -3.194   3.697  -1.785  "O3'"  F6G  10  
F6G  "C4'"  C7   C  0  1  N  N  R  56.579  34.428  137.422  -2.195   1.666  -0.861  "C4'"  F6G  11  
F6G  "C5'"  C8   C  0  1  N  N  N  57.909  33.645  137.526  -1.135   1.990   0.193  "C5'"  F6G  12  
F6G  "O5'"  O2   O  0  1  N  N  N  58.917  34.289  136.771  -0.021   1.110   0.034  "O5'"  F6G  13  
F6G  PA     P1   P  0  1  N  N  N  60.536  33.928  137.107   1.284   1.167   0.976  PA     F6G  14  
F6G  O1A    O3   O  0  1  N  N  N  61.461  34.779  136.239   1.846   2.536   0.958  O1A    F6G  15  
F6G  O2A    O4   O  0  1  N  N  N  60.934  34.043  138.580   0.874   0.775   2.483  O2A    F6G  16  
F6G  O3A    O5   O  0  1  N  N  N  60.646  32.412  136.545   2.385   0.127   0.432  O3A    F6G  17  
F6G  PB     P2   P  0  1  N  N  N  61.901  31.444  136.798   3.957  -0.084   0.707  PB     F6G  18  
F6G  O1B    O6   O  0  1  N  N  N  63.122  32.285  137.229   4.157  -0.881   2.092  O1B    F6G  19  
F6G  O2B    O7   O  0  1  N  N  N  62.152  30.963  135.415   4.624   1.235   0.796  O2B    F6G  20  
F6G  O3B    O8   O  0  1  N  N  N  61.315  30.399  138.010   4.605  -0.932  -0.498  O3B    F6G  21  
F6G  PG     P3   P  0  1  N  N  N  60.647  31.038  139.441   6.114  -1.214  -0.983  PG     F6G  22  
F6G  O3G    O9   O  0  1  N  N  N  60.810  30.251  140.715   6.766  -2.366  -0.067  O3G    F6G  23  
F6G  O1G    O10  O  0  1  N  N  N  61.421  32.302  139.792   6.103  -1.692  -2.520  O1G    F6G  24  
F6G  O2G    O11  O  0  1  N  N  N  59.143  31.300  139.251   6.912   0.026  -0.858  O2G    F6G  25  
F6G  "O4'"  O12  O  0  1  N  N  N  56.492  35.352  138.311  -2.809   0.389  -0.581  "O4'"  F6G  26  
F6G  O2     O13  O  0  1  N  N  N  56.289  39.395  138.071  -4.747   0.242   1.333  O2     F6G  27  
F6G  N3     N4   N  0  1  N  N  N  58.331  39.699  138.808  -6.109  -1.488   1.131  N3     F6G  28  
F6G  H1     H1   H  0  1  N  N  N  58.714  36.321  139.236  -4.856  -2.160  -2.060  H1     F6G  29  
F6G  H2     H2   H  0  1  N  N  N  59.228  36.674  137.552  -6.204  -1.062  -2.335  H2     F6G  30  
F6G  H3     H3   H  0  1  N  N  N  61.494  39.739  139.848  -8.036  -4.019   0.470  H3     F6G  31  
F6G  H4     H4   H  0  1  N  N  N  60.394  41.073  139.749  -7.735  -3.279   1.948  H4     F6G  32  
F6G  H5     H5   H  0  1  N  N  N  55.598  37.204  137.746  -3.915   0.214  -2.346  H5     F6G  33  
F6G  H6     H6   H  0  1  N  N  N  57.811  36.375  135.842  -5.117   2.194  -1.975  H6     F6G  34  
F6G  H7     H7   H  0  1  N  N  N  56.176  37.030  135.493  -5.297   1.867  -0.224  H7     F6G  35  
F6G  H8     H8   H  0  1  N  N  N  56.833  34.567  135.209  -3.410   3.131   0.204  H8     F6G  36  
F6G  H9     H9   H  0  1  N  N  N  54.615  34.070  135.708  -3.924   4.330  -1.824  H9     F6G  37  
F6G  H10    H10  H  0  1  N  N  N  55.770  33.695  137.555  -1.752   1.666  -1.857  H10    F6G  38  
F6G  H11    H11  H  0  1  N  N  N  57.761  32.626  137.140  -0.804   3.021   0.071  H11    F6G  39  
F6G  H12    H12  H  0  1  N  N  N  58.220  33.596  138.580  -1.561   1.861   1.188  H12    F6G  40  
F6G  H13    H13  H  0  1  N  N  N  61.681  34.624  138.662   0.498  -0.111   2.571  H13    F6G  41  
F6G  H14    H14  H  0  1  N  N  N  63.756  32.308  136.522   3.746  -1.755   2.106  H14    F6G  42  
F6G  H15    H15  H  0  1  N  N  N  59.957  30.098  141.105   6.294  -3.209  -0.100  H15    F6G  43  
F6G  H16    H16  H  0  1  N  N  N  60.823  33.039  139.831   6.981  -1.880  -2.880  H16    F6G  44  
F6G  H17    H17  H  0  1  N  N  N  58.144  40.674  138.932  -6.283  -1.462   2.085  H17    F6G  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
F6G  O2B    PB     DOUB  N  N   1  
F6G  "O3'"  "C3'"  SING  N  N   2  
F6G  "C3'"  "C2'"  SING  N  N   3  
F6G  "C3'"  "C4'"  SING  N  N   4  
F6G  "C2'"  "C1'"  SING  N  N   5  
F6G  O1A    PA     DOUB  N  N   6  
F6G  O3A    PB     SING  N  N   7  
F6G  O3A    PA     SING  N  N   8  
F6G  "O5'"  PA     SING  N  N   9  
F6G  "O5'"  "C5'"  SING  N  N  10  
F6G  PB     O1B    SING  N  N  11  
F6G  PB     O3B    SING  N  N  12  
F6G  PA     O2A    SING  N  N  13  
F6G  "C4'"  "C5'"  SING  N  N  14  
F6G  "C4'"  "O4'"  SING  N  N  15  
F6G  "C1'"  N1     SING  N  N  16  
F6G  "C1'"  "O4'"  SING  N  N  17  
F6G  O3B    PG     SING  N  N  18  
F6G  O2     C2     DOUB  N  N  19  
F6G  N1     C2     SING  N  N  20  
F6G  N1     C6     SING  N  N  21  
F6G  C2     N3     SING  N  N  22  
F6G  C6     N03    SING  N  N  23  
F6G  N3     C4     SING  N  N  24  
F6G  N03    C4     DOUB  N  N  25  
F6G  C4     N4     SING  N  N  26  
F6G  O2G    PG     DOUB  N  N  27  
F6G  PG     O1G    SING  N  N  28  
F6G  PG     O3G    SING  N  N  29  
F6G  C6     H1     SING  N  N  30  
F6G  C6     H2     SING  N  N  31  
F6G  N4     H3     SING  N  N  32  
F6G  N4     H4     SING  N  N  33  
F6G  "C1'"  H5     SING  N  N  34  
F6G  "C2'"  H6     SING  N  N  35  
F6G  "C2'"  H7     SING  N  N  36  
F6G  "C3'"  H8     SING  N  N  37  
F6G  "O3'"  H9     SING  N  N  38  
F6G  "C4'"  H10    SING  N  N  39  
F6G  "C5'"  H11    SING  N  N  40  
F6G  "C5'"  H12    SING  N  N  41  
F6G  O2A    H13    SING  N  N  42  
F6G  O1B    H14    SING  N  N  43  
F6G  O3G    H15    SING  N  N  44  
F6G  O1G    H16    SING  N  N  45  
F6G  N3     H17    SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
F6G  SMILES            ACDLabs               12.01  "C1(NC(N)=NCN1C2OC(C(C2)O)COP(O)(=O)OP(O)(OP(O)(O)=O)=O)=O"  
F6G  InChI             InChI                 1.03   "InChI=1S/C8H17N4O13P3/c9-7-10-3-12(8(14)11-7)6-1-4(13)5(23-6)2-22-27(18,19)25-28(20,21)24-26(15,16)17/h4-6,13H,1-3H2,(H,18,19)(H,20,21)(H2,15,16,17)(H3,9,10,11,14)/t4-,5+,6+/m0/s1"  
F6G  InChIKey          InChI                 1.03   YEGZZVDXUFGWTE-KVQBGUIXSA-N  
F6G  SMILES_CANONICAL  CACTVS                3.385  "NC1=NCN([C@H]2C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2)C(=O)N1"  
F6G  SMILES            CACTVS                3.385  "NC1=NCN([CH]2C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2)C(=O)N1"  
F6G  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C1[C@@H]([C@H](O[C@H]1N2CN=C(NC2=O)N)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O"  
F6G  SMILES            "OpenEye OEToolkits"  2.0.6  "C1C(C(OC1N2CN=C(NC2=O)N)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
F6G  "SYSTEMATIC NAME"  ACDLabs               12.01  "6-amino-3-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,4-dihydro-1,3,5-triazin-2(1H)-one"  
F6G  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "[[(2~{R},3~{S},5~{R})-5-(6-azanyl-2-oxidanylidene-1,4-dihydro-1,3,5-triazin-3-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
F6G  "Create component"  2018-03-05  RCSB  
F6G  "Initial release"   2019-06-19  RCSB  
##
