data_CTG
# 
_chem_comp.id                                    CTG 
_chem_comp.name                                  "(5R,6S)-5,6-DIHYDRO-5,6-DIHYDROXYTHYMIDINE-5'-MONOPHOSPHATE" 
_chem_comp.type                                  "DNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C10 H17 N2 O10 P" 
_chem_comp.mon_nstd_parent_comp_id               DT 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2006-09-13 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        356.223 
_chem_comp.one_letter_code                       T 
_chem_comp.three_letter_code                     CTG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CTG P      P    P 0 1 N N N 54.703 130.735 79.486 -3.968 -1.665 3.118  P      CTG 1  
CTG OP1    O1P  O 0 1 N N N 55.343 132.061 79.289 -4.406 -2.599 4.208  OP1    CTG 2  
CTG OP2    O2P  O 0 1 N N N 55.269 129.779 80.481 -4.901 -0.360 2.920  OP2    CTG 3  
CTG "O5'"  O5*  O 0 1 N N N 53.172 131.004 79.831 -2.493 -1.028 3.315  "O5'"  CTG 4  
CTG "C5'"  C5*  C 0 1 N N N 52.306 131.537 78.830 -2.005 -0.136 2.327  "C5'"  CTG 5  
CTG "C4'"  C4*  C 0 1 N N R 50.892 131.674 79.345 -0.611 0.328  2.728  "C4'"  CTG 6  
CTG "O4'"  O4*  O 0 1 N N N 50.169 130.427 79.141 0.247  -0.829 2.764  "O4'"  CTG 7  
CTG "C1'"  C1*  C 0 1 N N R 49.872 129.815 80.382 1.157  -0.778 1.657  "C1'"  CTG 8  
CTG N1     N1   N 0 1 N N N 50.241 128.384 80.326 1.164  -2.047 0.989  N1     CTG 9  
CTG C6     C6   C 0 1 N N S 51.645 128.034 80.479 0.126  -3.006 1.357  C6     CTG 10 
CTG O6     O6   O 0 1 N N N 52.086 128.132 81.841 -1.008 -2.788 0.517  O6     CTG 11 
CTG C2     C2   C 0 1 N N N 49.248 127.509 80.703 2.017  -2.285 -0.095 C2     CTG 12 
CTG O2     O2   O 0 1 N N N 48.061 127.798 80.685 2.810  -1.457 -0.550 O2     CTG 13 
CTG N3     N3   N 0 1 N N N 49.698 126.280 81.103 1.915  -3.568 -0.652 N3     CTG 14 
CTG C4     C4   C 0 1 N N N 50.895 125.687 80.756 1.214  -4.666 -0.157 C4     CTG 15 
CTG O4     O4   O 0 1 N N N 51.126 124.521 81.066 1.110  -5.728 -0.767 O4     CTG 16 
CTG C5     C5   C 0 1 N N R 51.866 126.592 79.975 0.621  -4.447 1.226  C5     CTG 17 
CTG C5M    C5M  C 0 1 N N N 51.588 126.505 78.480 1.678  -4.780 2.284  C5M    CTG 18 
CTG O5     O5   O 0 1 N N N 53.220 126.194 80.232 -0.480 -5.329 1.400  O5     CTG 19 
CTG "C2'"  C2*  C 0 1 N N N 50.529 130.611 81.511 0.710  0.360  0.754  "C2'"  CTG 20 
CTG "C3'"  C3*  C 0 1 N N S 50.845 131.947 80.841 0.008  1.286  1.720  "C3'"  CTG 21 
CTG "O3'"  O3*  O 0 1 N N N 50.162 133.131 81.236 0.965  2.121  2.368  "O3'"  CTG 22 
CTG OP3    O3P  O 0 1 N Y N ?      ?       ?      -3.912 -2.311 1.636  OP3    CTG 23 
CTG H71    1H5M H 0 1 N N N 50.502 126.484 78.309 2.185  -5.718 2.040  H71    CTG 24 
CTG H72    2H5M H 0 1 N N N 52.022 127.381 77.975 2.430  -3.986 2.339  H72    CTG 25 
CTG H73    3H5M H 0 1 N N N 52.040 125.587 78.076 1.215  -4.884 3.270  H73    CTG 26 
CTG HO5    HO5  H 0 1 N N N 53.686 126.106 79.409 -0.139 -6.230 1.278  HO5    CTG 27 
CTG H3     H3   H 0 1 N N N 49.098 125.758 81.709 2.424  -3.718 -1.519 H3     CTG 28 
CTG "H1'"  H1*  H 0 1 N N N 48.793 129.833 80.596 2.163  -0.604 2.054  "H1'"  CTG 29 
CTG "H2'"  1H2* H 0 1 N N N 49.853 130.735 82.370 -0.003 -0.001 0.003  "H2'"  CTG 30 
CTG "H2''" 2H2* H 0 0 N N N 51.417 130.116 81.931 1.556  0.818  0.232  "H2''" CTG 31 
CTG "H3'"  H3*  H 0 1 N N N 51.817 132.276 81.237 -0.722 1.941  1.236  "H3'"  CTG 32 
CTG "HO3'" H3T  H 0 0 N Y N 50.010 133.111 82.174 1.769  2.118  1.819  "HO3'" CTG 33 
CTG "H4'"  H4*  H 0 1 N N N 50.445 132.515 78.795 -0.644 0.753  3.736  "H4'"  CTG 34 
CTG "H5'"  1H5* H 0 1 N N N 52.674 132.530 78.533 -1.971 -0.654 1.366  "H5'"  CTG 35 
CTG "H5''" 2H5* H 0 0 N N N 52.299 130.848 77.972 -2.683 0.718  2.254  "H5''" CTG 36 
CTG HOP3   3HOP H 0 0 N N N ?      ?       ?      -4.684 -2.823 1.313  HOP3   CTG 37 
CTG H6     H6   H 0 1 N N N 52.234 128.750 79.887 -0.195 -2.810 2.387  H6     CTG 38 
CTG HO6    HO6  H 0 1 N N N 53.035 128.154 81.866 -1.057 -1.832 0.367  HO6    CTG 39 
CTG HOP2   2HOP H 0 0 N N N 55.389 128.930 80.072 -5.874 -0.475 2.871  HOP2   CTG 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CTG P     "O5'"  SING N N 1  
CTG P     OP1    DOUB N N 2  
CTG P     OP3    SING N N 3  
CTG P     OP2    SING N N 4  
CTG OP2   HOP2   SING N N 5  
CTG "O5'" "C5'"  SING N N 6  
CTG "C5'" "C4'"  SING N N 7  
CTG "C5'" "H5'"  SING N N 8  
CTG "C5'" "H5''" SING N N 9  
CTG "C4'" "C3'"  SING N N 10 
CTG "C4'" "O4'"  SING N N 11 
CTG "C4'" "H4'"  SING N N 12 
CTG "O4'" "C1'"  SING N N 13 
CTG "C1'" N1     SING N N 14 
CTG "C1'" "C2'"  SING N N 15 
CTG "C1'" "H1'"  SING N N 16 
CTG N1    C2     SING N N 17 
CTG N1    C6     SING N N 18 
CTG C6    C5     SING N N 19 
CTG C6    O6     SING N N 20 
CTG C6    H6     SING N N 21 
CTG O6    HO6    SING N N 22 
CTG C2    N3     SING N N 23 
CTG C2    O2     DOUB N N 24 
CTG N3    C4     SING N N 25 
CTG N3    H3     SING N N 26 
CTG C4    C5     SING N N 27 
CTG C4    O4     DOUB N N 28 
CTG C5    C5M    SING N N 29 
CTG C5    O5     SING N N 30 
CTG C5M   H71    SING N N 31 
CTG C5M   H72    SING N N 32 
CTG C5M   H73    SING N N 33 
CTG O5    HO5    SING N N 34 
CTG "C2'" "C3'"  SING N N 35 
CTG "C2'" "H2'"  SING N N 36 
CTG "C2'" "H2''" SING N N 37 
CTG "C3'" "O3'"  SING N N 38 
CTG "C3'" "H3'"  SING N N 39 
CTG "O3'" "HO3'" SING N N 40 
CTG OP3   HOP3   SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CTG SMILES           ACDLabs              10.04 "O=C1N(C(O)C(O)(C(=O)N1)C)C2OC(C(O)C2)COP(=O)(O)O"                                                                                                                    
CTG SMILES_CANONICAL CACTVS               3.341 "C[C@@]1(O)[C@H](O)N([C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)C(=O)NC1=O"                                                                                               
CTG SMILES           CACTVS               3.341 "C[C]1(O)[CH](O)N([CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)C(=O)NC1=O"                                                                                                      
CTG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@]1([C@@H](N(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O)O)O"                                                                                                 
CTG SMILES           "OpenEye OEToolkits" 1.5.0 "CC1(C(N(C(=O)NC1=O)C2CC(C(O2)COP(=O)(O)O)O)O)O"                                                                                                                      
CTG InChI            InChI                1.03  "InChI=1S/C10H17N2O10P/c1-10(17)7(14)11-9(16)12(8(10)15)6-2-4(13)5(22-6)3-21-23(18,19)20/h4-6,8,13,15,17H,2-3H2,1H3,(H,11,14,16)(H2,18,19,20)/t4-,5+,6+,8-,10-/m0/s1" 
CTG InChIKey         InChI                1.03  QWAYKDYQHLTLIL-LFOMBHIWSA-N                                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CTG "SYSTEMATIC NAME" ACDLabs              10.04 
;5,6-dihydroxythymidine 5'-(dihydrogen phosphate)
;
CTG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,5R)-5-[(5R,6S)-5,6-dihydroxy-5-methyl-2,4-dioxo-1,3-diazinan-1-yl]-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CTG "Create component"  2006-09-13 PDBJ 
CTG "Modify descriptor" 2011-06-04 RCSB 
# 
