data_4TG
# 
_chem_comp.id                                    4TG 
_chem_comp.name                                  dTDP-4,6-dideoxy-4-formamido-glucose 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H27 N3 O15 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-12-12 
_chem_comp.pdbx_modified_date                    2013-12-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        575.355 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4TG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4NV1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4TG C4    C4    C 0 1 N N N -11.055 10.256 10.939 -6.563 -3.213 0.672  C4    4TG 1  
4TG C5    C5    C 0 1 N N N -10.651 9.128  10.259 -6.426 -3.136 -0.735 C5    4TG 2  
4TG O4    O4    O 0 1 N N N -10.860 10.352 12.275 -7.016 -4.217 1.191  O4    4TG 3  
4TG C6    C6    C 0 1 N N N -10.895 9.031  8.885  -5.920 -2.012 -1.286 C6    4TG 4  
4TG N1    N1    N 0 1 N N N -11.493 10.061 8.279  -5.550 -0.970 -0.479 N1    4TG 5  
4TG N3    N3    N 0 1 N N N -11.648 11.278 10.300 -6.182 -2.166 1.432  N3    4TG 6  
4TG O2B   O2B   O 0 1 N N N -9.111  2.656  4.518  3.384  3.391  -0.508 O2B   4TG 7  
4TG PB    PB    P 0 1 N N N -8.620  4.027  4.828  2.976  2.039  0.266  PB    4TG 8  
4TG O1B   O1B   O 0 1 N N N -8.505  5.003  3.663  3.328  2.165  1.698  O1B   4TG 9  
4TG O3B   O3B   O 0 1 N N N -7.196  4.049  5.573  3.771  0.794  -0.375 O3B   4TG 10 
4TG C1Q   C1Q   C 0 1 N N R -6.098  3.206  5.340  5.192  0.662  -0.311 C1Q   4TG 11 
4TG O5Q   O5Q   O 0 1 N N N -5.385  3.697  4.211  5.552  -0.054 0.872  O5Q   4TG 12 
4TG C5Q   C5Q   C 0 1 N N R -4.836  5.005  4.400  4.982  -1.362 0.958  C5Q   4TG 13 
4TG C6Q   C6Q   C 0 1 N N N -4.136  5.479  3.121  5.410  -2.020 2.271  C6Q   4TG 14 
4TG C4Q   C4Q   C 0 1 N N S -3.899  5.056  5.602  5.471  -2.208 -0.220 C4Q   4TG 15 
4TG N4Q   N4Q   N 0 1 N N N -3.640  6.458  5.917  4.842  -3.531 -0.168 N4Q   4TG 16 
4TG C     C     C 0 1 N N N -2.348  7.072  5.660  5.384  -4.505 0.589  C     4TG 17 
4TG O     O     O 0 1 N N N -1.422  6.399  5.174  6.393  -4.287 1.227  O     4TG 18 
4TG C3Q   C3Q   C 0 1 N N S -4.538  4.574  6.902  5.091  -1.513 -1.531 C3Q   4TG 19 
4TG O3Q   O3Q   O 0 1 N N N -3.548  4.485  7.951  5.608  -2.259 -2.635 O3Q   4TG 20 
4TG C2Q   C2Q   C 0 1 N N R -5.338  3.294  6.671  5.690  -0.103 -1.540 C2Q   4TG 21 
4TG O2Q   O2Q   O 0 1 N N N -6.291  3.291  7.746  5.282  0.582  -2.726 O2Q   4TG 22 
4TG O3A   O3A   O 0 1 N N N -9.510  4.721  6.024  1.391  1.796  0.122  O3A   4TG 23 
4TG PA    PA    P 0 1 N N N -8.969  5.944  6.907  0.091  2.465  0.795  PA    4TG 24 
4TG O2A   O2A   O 0 1 N N N -7.692  6.631  6.419  0.238  3.938  0.793  O2A   4TG 25 
4TG O1A   O1A   O 0 1 N N N -8.837  5.522  8.349  -0.058 1.943  2.311  O1A   4TG 26 
4TG "O5'" "O5'" O 0 1 N N N -10.130 7.001  6.602  -1.220 2.055  -0.045 "O5'" 4TG 27 
4TG "C5'" "C5'" C 0 1 N N N -10.677 7.203  5.300  -2.520 2.576  0.238  "C5'" 4TG 28 
4TG "C4'" "C4'" C 0 1 N N R -11.127 8.660  5.233  -3.532 1.982  -0.744 "C4'" 4TG 29 
4TG "O4'" "O4'" O 0 1 N N N -12.048 8.869  6.309  -3.731 0.578  -0.474 "O4'" 4TG 30 
4TG "C1'" "C1'" C 0 1 N N R -11.830 10.158 6.858  -5.002 0.250  -1.077 "C1'" 4TG 31 
4TG "C2'" "C2'" C 0 1 N N N -10.719 10.861 6.078  -5.911 1.459  -0.762 "C2'" 4TG 32 
4TG "C3'" "C3'" C 0 1 N N S -10.022 9.706  5.384  -4.922 2.625  -0.538 "C3'" 4TG 33 
4TG "O3'" "O3'" O 0 1 N N N -9.412  10.131 4.158  -5.142 3.660  -1.498 "O3'" 4TG 34 
4TG C2    C2    C 0 1 N N N -11.870 11.113 8.982  -5.686 -1.055 0.856  C2    4TG 35 
4TG O2    O2    O 0 1 N N N -12.435 12.111 8.283  -5.351 -0.117 1.554  O2    4TG 36 
4TG C5M   C5M   C 0 1 N N N -9.965  8.033  11.054 -6.838 -4.294 -1.607 C5M   4TG 37 
4TG H1    H1    H 0 1 N N N -10.609 8.150  8.330  -5.808 -1.935 -2.357 H1    4TG 38 
4TG H2    H2    H 0 1 N N N -11.911 12.117 10.777 -6.269 -2.213 2.397  H2    4TG 39 
4TG H3    H3    H 0 1 N N N -9.291  2.586  3.588  3.181  3.380  -1.453 H3    4TG 40 
4TG H4    H4    H 0 1 N N N -6.423  2.168  5.176  5.649  1.652  -0.289 H4    4TG 41 
4TG H5    H5    H 0 1 N N N -5.661  5.705  4.598  3.895  -1.288 0.926  H5    4TG 42 
4TG H6    H6    H 0 1 N N N -3.720  6.484  3.281  5.062  -1.417 3.110  H6    4TG 43 
4TG H7    H7    H 0 1 N N N -3.324  4.782  2.868  4.975  -3.017 2.336  H7    4TG 44 
4TG H8    H8    H 0 1 N N N -4.863  5.511  2.296  6.497  -2.095 2.303  H8    4TG 45 
4TG H9    H9    H 0 1 N N N -2.969  4.505  5.396  6.554  -2.318 -0.165 H9    4TG 46 
4TG H10   H10   H 0 1 N N N -4.370  7.010  6.320  4.036  -3.705 -0.678 H10   4TG 47 
4TG H11   H11   H 0 1 N N N -2.192  8.115  5.892  4.920  -5.480 0.628  H11   4TG 48 
4TG H12   H12   H 0 1 N N N -5.263  5.346  7.198  4.006  -1.450 -1.609 H12   4TG 49 
4TG H13   H13   H 0 1 N N N -3.961  4.184  8.752  5.404  -1.874 -3.499 H13   4TG 50 
4TG H14   H14   H 0 1 N N N -4.664  2.429  6.756  6.778  -0.169 -1.512 H14   4TG 51 
4TG H15   H15   H 0 1 N N N -5.833  3.345  8.576  5.621  1.485  -2.796 H15   4TG 52 
4TG H16   H16   H 0 1 N N N -7.979  5.768  8.674  -0.158 0.984  2.388  H16   4TG 53 
4TG H17   H17   H 0 1 N N N -11.535 6.534  5.142  -2.803 2.310  1.257  H17   4TG 54 
4TG H18   H18   H 0 1 N N N -9.913  7.007  4.533  -2.507 3.661  0.136  H18   4TG 55 
4TG H19   H19   H 0 1 N N N -11.634 8.825  4.271  -3.195 2.129  -1.770 H19   4TG 56 
4TG H20   H20   H 0 1 N N N -12.746 10.757 6.754  -4.890 0.128  -2.154 H20   4TG 57 
4TG H21   H21   H 0 1 N N N -10.032 11.391 6.755  -6.568 1.672  -1.605 H21   4TG 58 
4TG H22   H22   H 0 1 N N N -11.134 11.571 5.348  -6.495 1.273  0.140  H22   4TG 59 
4TG H23   H23   H 0 1 N N N -9.253  9.304  6.060  -5.015 3.016  0.475  H23   4TG 60 
4TG H24   H24   H 0 1 N N N -8.741  10.777 4.345  -6.001 4.097  -1.414 H24   4TG 61 
4TG H25   H25   H 0 1 N N N -9.887  8.338  12.108 -7.218 -5.102 -0.982 H25   4TG 62 
4TG H26   H26   H 0 1 N N N -10.553 7.106  10.983 -7.618 -3.971 -2.296 H26   4TG 63 
4TG H27   H27   H 0 1 N N N -8.958  7.861  10.647 -5.976 -4.648 -2.173 H27   4TG 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4TG C6Q   C5Q   SING N N 1  
4TG O1B   PB    DOUB N N 2  
4TG "O3'" "C3'" SING N N 3  
4TG O5Q   C5Q   SING N N 4  
4TG O5Q   C1Q   SING N N 5  
4TG C5Q   C4Q   SING N N 6  
4TG O2B   PB    SING N N 7  
4TG PB    O3B   SING N N 8  
4TG PB    O3A   SING N N 9  
4TG O     C     DOUB N N 10 
4TG "C4'" "C5'" SING N N 11 
4TG "C4'" "C3'" SING N N 12 
4TG "C4'" "O4'" SING N N 13 
4TG "C5'" "O5'" SING N N 14 
4TG C1Q   O3B   SING N N 15 
4TG C1Q   C2Q   SING N N 16 
4TG "C3'" "C2'" SING N N 17 
4TG C4Q   N4Q   SING N N 18 
4TG C4Q   C3Q   SING N N 19 
4TG C     N4Q   SING N N 20 
4TG O3A   PA    SING N N 21 
4TG "C2'" "C1'" SING N N 22 
4TG "O4'" "C1'" SING N N 23 
4TG O2A   PA    DOUB N N 24 
4TG "O5'" PA    SING N N 25 
4TG C2Q   C3Q   SING N N 26 
4TG C2Q   O2Q   SING N N 27 
4TG "C1'" N1    SING N N 28 
4TG C3Q   O3Q   SING N N 29 
4TG PA    O1A   SING N N 30 
4TG N1    C6    SING N N 31 
4TG N1    C2    SING N N 32 
4TG O2    C2    DOUB N N 33 
4TG C6    C5    DOUB N N 34 
4TG C2    N3    SING N N 35 
4TG C5    C4    SING N N 36 
4TG C5    C5M   SING N N 37 
4TG N3    C4    SING N N 38 
4TG C4    O4    DOUB N N 39 
4TG C6    H1    SING N N 40 
4TG N3    H2    SING N N 41 
4TG O2B   H3    SING N N 42 
4TG C1Q   H4    SING N N 43 
4TG C5Q   H5    SING N N 44 
4TG C6Q   H6    SING N N 45 
4TG C6Q   H7    SING N N 46 
4TG C6Q   H8    SING N N 47 
4TG C4Q   H9    SING N N 48 
4TG N4Q   H10   SING N N 49 
4TG C     H11   SING N N 50 
4TG C3Q   H12   SING N N 51 
4TG O3Q   H13   SING N N 52 
4TG C2Q   H14   SING N N 53 
4TG O2Q   H15   SING N N 54 
4TG O1A   H16   SING N N 55 
4TG "C5'" H17   SING N N 56 
4TG "C5'" H18   SING N N 57 
4TG "C4'" H19   SING N N 58 
4TG "C1'" H20   SING N N 59 
4TG "C2'" H21   SING N N 60 
4TG "C2'" H22   SING N N 61 
4TG "C3'" H23   SING N N 62 
4TG "O3'" H24   SING N N 63 
4TG C5M   H25   SING N N 64 
4TG C5M   H26   SING N N 65 
4TG C5M   H27   SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4TG SMILES           ACDLabs              12.01 "O=C1C(=CN(C(=O)N1)C2OC(C(O)C2)COP(=O)(OP(=O)(OC3OC(C(NC=O)C(O)C3O)C)O)O)C" 
4TG InChI            InChI                1.03  
"InChI=1S/C17H27N3O15P2/c1-7-4-20(17(26)19-15(7)25)11-3-9(22)10(33-11)5-31-36(27,28)35-37(29,30)34-16-14(24)13(23)12(18-6-21)8(2)32-16/h4,6,8-14,16,22-24H,3,5H2,1-2H3,(H,18,21)(H,27,28)(H,29,30)(H,19,25,26)/t8-,9+,10-,11-,12-,13+,14-,16-/m1/s1" 
4TG InChIKey         InChI                1.03  QULUVRDLMBXPHO-GJSHGOAISA-N 
4TG SMILES_CANONICAL CACTVS               3.385 "C[C@H]1O[C@H](O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H](C[C@@H]2O)N3C=C(C)C(=O)NC3=O)[C@H](O)[C@@H](O)[C@@H]1NC=O" 
4TG SMILES           CACTVS               3.385 "C[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH](C[CH]2O)N3C=C(C)C(=O)NC3=O)[CH](O)[CH](O)[CH]1NC=O" 
4TG SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)OP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H](C[C@@H](O2)N3C=C(C(=O)NC3=O)C)O)O)O)NC=O" 
4TG SMILES           "OpenEye OEToolkits" 1.7.6 "CC1C(C(C(C(O1)OP(=O)(O)OP(=O)(O)OCC2C(CC(O2)N3C=C(C(=O)NC3=O)C)O)O)O)NC=O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
4TG "SYSTEMATIC NAME" ACDLabs              12.01 
"(2R,3R,4S,5S,6R)-5-(formylamino)-3,4-dihydroxy-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" 
4TG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3R,4S,5S,6R)-5-formamido-6-methyl-3,4-bis(oxidanyl)oxan-2-yl] [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4TG "Create component" 2013-12-12 RCSB 
4TG "Initial release"  2013-12-25 RCSB 
# 
