data_Y0F
# 
_chem_comp.id                                    Y0F 
_chem_comp.name                                  "(2E)-1-[(3aS,8aS)-2-(1,4,6,7-tetrahydro-5H-[1,2,3]triazolo[4,5-c]pyridine-5-carbonyl)octahydropyrrolo[3,4-d]azepin-6(1H)-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-en-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H27 F3 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-09 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        504.505 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y0F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G5M 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y0F C01 C1  C 0 1 N N N N N N -14.615 9.697  49.780 -0.520 0.901  1.725  C01 Y0F 1  
Y0F C02 C2  C 0 1 N N N N N N -14.624 11.156 50.003 0.150  -0.252 1.040  C02 Y0F 2  
Y0F N03 N1  N 0 1 N N N N N N -13.860 9.203  48.647 -0.387 2.157  0.998  N03 Y0F 3  
Y0F C04 C3  C 0 1 N N N N N N -12.557 9.477  48.111 0.861  2.884  0.977  C04 Y0F 4  
Y0F C05 C4  C 0 1 N N N N N N -11.618 10.272 48.959 1.942  2.046  0.322  C05 Y0F 5  
Y0F C06 C5  C 0 1 N N R N N N -13.308 11.971 50.089 1.633  -0.338 1.179  C06 Y0F 6  
Y0F C07 C6  C 0 1 N N S N N N -12.133 11.709 49.236 2.465  0.922  1.162  C07 Y0F 7  
Y0F N09 N2  N 0 1 N N N N N N -11.368 12.412 51.399 3.732  -0.966 0.301  N09 Y0F 8  
Y0F C10 C7  C 0 1 N N N N N N -12.828 12.135 51.523 2.286  -1.239 0.108  C10 Y0F 9  
Y0F C13 C8  C 0 1 N N N N N N -14.532 8.173  47.892 -1.451 2.651  0.333  C13 Y0F 10 
Y0F C16 C9  C 0 1 N N N N N N -13.989 6.164  46.561 -3.714 2.320  -0.504 C16 Y0F 11 
Y0F C17 C10 C 0 1 Y N N N N N -13.079 5.477  45.600 -4.955 1.536  -0.592 C17 Y0F 12 
Y0F C18 C11 C 0 1 Y N N N N N -12.994 4.089  45.596 -6.024 1.999  -1.368 C18 Y0F 13 
Y0F C19 C12 C 0 1 Y N N N N N -12.140 3.472  44.703 -7.183 1.261  -1.448 C19 Y0F 14 
Y0F C20 C13 C 0 1 Y N N N N N -11.383 4.265  43.791 -7.293 0.058  -0.760 C20 Y0F 15 
Y0F C21 C14 C 0 1 Y N N N N N -11.501 5.652  43.796 -6.234 -0.406 0.012  C21 Y0F 16 
Y0F C22 C15 C 0 1 Y N N N N N -12.341 6.274  44.696 -5.069 0.321  0.094  C22 Y0F 17 
Y0F C24 C16 C 0 1 N N N N N N -10.533 2.385  42.676 -8.485 -1.893 -0.110 C24 Y0F 18 
Y0F C28 C17 C 0 1 N N N N N N -10.514 13.266 52.235 4.742  -1.854 0.221  C28 Y0F 19 
Y0F C08 C18 C 0 1 N N N N N N -11.002 12.315 49.999 3.839  0.475  0.599  C08 Y0F 20 
Y0F C14 C19 C 0 1 N N N N N N -13.832 7.532  46.716 -2.685 1.871  0.245  C14 Y0F 21 
Y0F O15 O1  O 0 1 N N N N N N -15.638 7.805  48.192 -1.383 3.746  -0.195 O15 Y0F 22 
Y0F O23 O2  O 0 1 N N N N N N -10.511 3.710  42.869 -8.439 -0.666 -0.842 O23 Y0F 23 
Y0F F25 F1  F 0 1 N N N N N N -9.964  2.167  41.514 -8.302 -1.630 1.252  F25 Y0F 24 
Y0F F26 F2  F 0 1 N N N N N N -9.955  1.746  43.711 -9.727 -2.505 -0.305 F26 Y0F 25 
Y0F F27 F3  F 0 1 N N N N N N -11.800 2.037  42.681 -7.470 -2.743 -0.561 F27 Y0F 26 
Y0F N29 N3  N 0 1 N N N N N N -9.199  12.891 52.754 6.014  -1.447 0.407  N29 Y0F 27 
Y0F O30 O3  O 0 1 N N N N N N -10.978 14.407 52.494 4.507  -3.022 -0.020 O30 Y0F 28 
Y0F C31 C20 C 0 1 N N N N N N -9.185  11.678 53.503 7.105  -2.424 0.539  C31 Y0F 29 
Y0F C32 C21 C 0 1 N N N N N N -7.990  11.094 53.932 8.072  -2.264 -0.641 C32 Y0F 30 
Y0F C33 C22 C 0 1 N N N N N N -8.265  13.880 53.089 6.344  -0.011 0.476  C33 Y0F 31 
Y0F C34 C23 C 0 1 Y N N N N N -6.957  13.473 53.796 7.580  0.202  -0.361 C34 Y0F 32 
Y0F C35 C24 C 0 1 Y N N N N N -6.839  12.059 54.230 8.344  -0.798 -0.849 C35 Y0F 33 
Y0F N36 N4  N 0 1 Y N N N N N -5.620  11.911 54.805 9.344  -0.211 -1.529 N36 Y0F 34 
Y0F N37 N5  N 0 1 Y N N N N N -4.951  13.177 54.770 9.184  1.068  -1.452 N37 Y0F 35 
Y0F N38 N6  N 0 1 Y N N N N N -5.817  14.127 54.130 8.137  1.338  -0.765 N38 Y0F 36 
Y0F H39 H1  H 0 1 N N N N N N -14.200 9.227  50.684 -1.579 0.672  1.839  H39 Y0F 37 
Y0F H40 H2  H 0 1 N N N N N N -15.659 9.377  49.647 -0.082 1.022  2.716  H40 Y0F 38 
Y0F H42 H3  H 0 1 N N N N N N -15.206 11.592 49.178 -0.280 -1.174 1.432  H42 Y0F 39 
Y0F H41 H4  H 0 1 N N N N N N -15.154 11.321 50.953 -0.087 -0.198 -0.022 H41 Y0F 40 
Y0F H43 H5  H 0 1 N N N N N N -12.076 8.510  47.903 0.731  3.809  0.416  H43 Y0F 41 
Y0F H44 H6  H 0 1 N N N N N N -12.697 10.027 47.169 1.158  3.122  1.999  H44 Y0F 42 
Y0F H45 H7  H 0 1 N N N N N N -11.487 9.754  49.920 1.541  1.628  -0.601 H45 Y0F 43 
Y0F H46 H8  H 0 1 N N N N N N -10.649 10.339 48.443 2.775  2.700  0.065  H46 Y0F 44 
Y0F H12 H9  H 0 1 N N N N N N -13.621 12.987 49.805 1.832  -0.828 2.132  H12 Y0F 45 
Y0F H11 H10 H 0 1 N N N N N N -12.249 12.233 48.276 2.606  1.273  2.184  H11 Y0F 46 
Y0F H49 H11 H 0 1 N N N N N N -13.343 12.975 52.012 2.061  -2.289 0.296  H49 Y0F 47 
Y0F H50 H12 H 0 1 N N N N N N -13.001 11.214 52.099 1.966  -0.947 -0.892 H50 Y0F 48 
Y0F H52 H13 H 0 1 N N N N N N -14.739 5.618  47.113 -3.627 3.255  -1.038 H52 Y0F 49 
Y0F H53 H14 H 0 1 N N N N N N -13.587 3.502  46.281 -5.940 2.934  -1.902 H53 Y0F 50 
Y0F H54 H15 H 0 1 N N N N N N -12.046 2.396  44.695 -8.009 1.617  -2.046 H54 Y0F 51 
Y0F H55 H16 H 0 1 N N N N N N -10.933 6.243  43.093 -6.325 -1.341 0.545  H55 Y0F 52 
Y0F H56 H17 H 0 1 N N N N N N -12.433 7.350  44.710 -4.245 -0.043 0.690  H56 Y0F 53 
Y0F H48 H18 H 0 1 N N N N N N -10.108 11.683 49.896 4.066  1.028  -0.312 H48 Y0F 54 
Y0F H47 H19 H 0 1 N N N N N N -10.788 13.319 49.604 4.619  0.645  1.342  H47 Y0F 55 
Y0F H51 H20 H 0 1 N N N N N N -13.237 8.114  46.028 -2.772 0.936  0.778  H51 Y0F 56 
Y0F H57 H21 H 0 1 N N N N N N -9.780  11.867 54.409 7.639  -2.249 1.474  H57 Y0F 57 
Y0F H58 H22 H 0 1 N N N N N N -9.692  10.925 52.882 6.692  -3.433 0.538  H58 Y0F 58 
Y0F H59 H23 H 0 1 N N N N N N -8.203  10.530 54.852 9.006  -2.781 -0.421 H59 Y0F 59 
Y0F H60 H24 H 0 1 N N N N N N -7.653  10.401 53.147 7.623  -2.684 -1.541 H60 Y0F 60 
Y0F H62 H25 H 0 1 N N N N N N -7.981  14.383 52.153 5.519  0.579  0.077  H62 Y0F 61 
Y0F H61 H26 H 0 1 N N N N N N -8.778  14.595 53.749 6.542  0.275  1.509  H61 Y0F 62 
Y0F H63 H27 H 0 1 N N N N N N -5.251  11.064 55.188 10.061 -0.668 -1.996 H63 Y0F 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y0F C01 C02 SING N N 1  
Y0F C01 N03 SING N N 2  
Y0F N03 C04 SING N N 3  
Y0F C04 C05 SING N N 4  
Y0F C02 C06 SING N N 5  
Y0F C05 C07 SING N N 6  
Y0F C06 C07 SING N N 7  
Y0F C07 C08 SING N N 8  
Y0F C08 N09 SING N N 9  
Y0F C06 C10 SING N N 10 
Y0F N09 C10 SING N N 11 
Y0F N03 C13 SING N N 12 
Y0F C13 C14 SING N N 13 
Y0F C13 O15 DOUB N N 14 
Y0F C14 C16 DOUB N E 15 
Y0F C16 C17 SING N N 16 
Y0F C17 C18 DOUB Y N 17 
Y0F C18 C19 SING Y N 18 
Y0F C19 C20 DOUB Y N 19 
Y0F C20 C21 SING Y N 20 
Y0F C17 C22 SING Y N 21 
Y0F C21 C22 DOUB Y N 22 
Y0F C20 O23 SING N N 23 
Y0F O23 C24 SING N N 24 
Y0F C24 F25 SING N N 25 
Y0F C24 F26 SING N N 26 
Y0F C24 F27 SING N N 27 
Y0F N09 C28 SING N N 28 
Y0F C28 N29 SING N N 29 
Y0F C28 O30 DOUB N N 30 
Y0F N29 C31 SING N N 31 
Y0F C31 C32 SING N N 32 
Y0F N29 C33 SING N N 33 
Y0F C33 C34 SING N N 34 
Y0F C32 C35 SING N N 35 
Y0F C34 C35 DOUB Y N 36 
Y0F C35 N36 SING Y N 37 
Y0F N36 N37 SING Y N 38 
Y0F C34 N38 SING Y N 39 
Y0F N37 N38 DOUB Y N 40 
Y0F C01 H39 SING N N 41 
Y0F C01 H40 SING N N 42 
Y0F C02 H42 SING N N 43 
Y0F C02 H41 SING N N 44 
Y0F C04 H43 SING N N 45 
Y0F C04 H44 SING N N 46 
Y0F C05 H45 SING N N 47 
Y0F C05 H46 SING N N 48 
Y0F C06 H12 SING N N 49 
Y0F C07 H11 SING N N 50 
Y0F C10 H49 SING N N 51 
Y0F C10 H50 SING N N 52 
Y0F C16 H52 SING N N 53 
Y0F C18 H53 SING N N 54 
Y0F C19 H54 SING N N 55 
Y0F C21 H55 SING N N 56 
Y0F C22 H56 SING N N 57 
Y0F C08 H48 SING N N 58 
Y0F C08 H47 SING N N 59 
Y0F C14 H51 SING N N 60 
Y0F C31 H57 SING N N 61 
Y0F C31 H58 SING N N 62 
Y0F C32 H59 SING N N 63 
Y0F C32 H60 SING N N 64 
Y0F C33 H62 SING N N 65 
Y0F C33 H61 SING N N 66 
Y0F N36 H63 SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y0F SMILES           ACDLabs              12.01 "FC(F)(F)Oc1ccc(cc1)/C=C/C(=O)N1CCC2CN(CC2CC1)C(=O)N1CCc2[NH]nnc2C1"                                                                                                       
Y0F InChI            InChI                1.06  "InChI=1S/C24H27F3N6O3/c25-24(26,27)36-19-4-1-16(2-5-19)3-6-22(34)31-10-7-17-13-33(14-18(17)8-11-31)23(35)32-12-9-20-21(15-32)29-30-28-20/h1-6,17-18H,7-15H2,(H,28,29,30)" 
Y0F InChIKey         InChI                1.06  JCUYLNIOELOLJV-UHFFFAOYSA-N                                                                                                                                                
Y0F SMILES_CANONICAL CACTVS               3.385 "FC(F)(F)Oc1ccc(/C=C/C(=O)N2CC[C@H]3CN(C[C@H]3CC2)C(=O)N4CCc5[nH]nnc5C4)cc1"                                                                                               
Y0F SMILES           CACTVS               3.385 "FC(F)(F)Oc1ccc(C=CC(=O)N2CC[CH]3CN(C[CH]3CC2)C(=O)N4CCc5[nH]nnc5C4)cc1"                                                                                                   
Y0F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1/C=C/C(=O)N2CC[C@@H]3CN(C[C@@H]3CC2)C(=O)N4CCc5c(nn[nH]5)C4)OC(F)(F)F"                                                                                           
Y0F SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C=CC(=O)N2CCC3CN(CC3CC2)C(=O)N4CCc5c(nn[nH]5)C4)OC(F)(F)F"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y0F "SYSTEMATIC NAME" ACDLabs              12.01 "(2E)-1-[(3aS,8aS)-2-(1,4,6,7-tetrahydro-5H-[1,2,3]triazolo[4,5-c]pyridine-5-carbonyl)octahydropyrrolo[3,4-d]azepin-6(1H)-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-en-1-one"                                    
Y0F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{E})-1-[(3~{a}~{S},8~{a}~{R})-2-(1,4,6,7-tetrahydro-[1,2,3]triazolo[4,5-c]pyridin-5-ylcarbonyl)-1,3,3~{a},4,5,7,8,8~{a}-octahydropyrrolo[3,4-d]azepin-6-yl]-3-[4-(trifluoromethyloxy)phenyl]prop-2-en-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y0F "Create component" 2023-06-09 RCSB 
Y0F "Initial release"  2024-12-18 RCSB 
# 
