data_V9F
# 
_chem_comp.id                                    V9F 
_chem_comp.name                                  "Marbostat 200" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H33 N5 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-11 
_chem_comp.pdbx_modified_date                    2024-08-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        547.602 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V9F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8QH9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V9F C1  C1  C 0 1 N N N N N N -6.785 26.396 -4.883  -6.304 -3.279 -0.511 C1  V9F 1  
V9F C10 C2  C 0 1 N N N N N N -0.980 28.937 -2.545  -2.490 2.590  0.565  C10 V9F 2  
V9F C11 C3  C 0 1 N N N N N N 1.109  28.278 -1.989  -1.495 3.345  -1.596 C11 V9F 3  
V9F C12 C4  C 0 1 N N S N N N 1.706  28.074 -3.356  -0.071 2.773  -1.290 C12 V9F 4  
V9F C13 C5  C 0 1 N N N N N N 3.122  28.704 -3.379  0.678  2.330  -2.548 C13 V9F 5  
V9F C14 C6  C 0 1 Y N N N N N 0.770  28.734 -4.333  -0.329 1.629  -0.324 C14 V9F 6  
V9F C15 C7  C 0 1 Y N N N N N 0.924  29.078 -5.705  0.491  0.458  -0.094 C15 V9F 7  
V9F C16 C8  C 0 1 Y N N N N N 1.952  28.889 -6.644  1.708  0.034  -0.635 C16 V9F 8  
V9F C17 C9  C 0 1 Y N N N N N 1.769  29.338 -7.943  2.213  -1.172 -0.169 C17 V9F 9  
V9F C18 C10 C 0 1 N N N N N N 3.869  28.351 -8.641  3.874  -2.874 -0.152 C18 V9F 10 
V9F C19 C11 C 0 1 N N N N N N 4.699  28.242 -9.899  5.205  -3.222 -0.820 C19 V9F 11 
V9F C2  C12 C 0 1 Y N N N N N -5.740 27.481 -4.901  -5.284 -2.461 0.180  C2  V9F 12 
V9F C20 C13 C 0 1 N N N N N N 2.985  27.086 -11.269 7.441  -2.389 -1.239 C20 V9F 13 
V9F C21 C14 C 0 1 N N N N N N 2.763  25.963 -12.253 8.445  -1.301 -0.850 C21 V9F 14 
V9F C3  C15 C 0 1 Y N N N N N -5.892 28.734 -4.306  -4.147 -3.065 0.718  C3  V9F 15 
V9F C4  C16 C 0 1 Y N N N N N -4.849 29.655 -4.313  -3.200 -2.296 1.361  C4  V9F 16 
V9F C5  C17 C 0 1 Y N N N N N -3.628 29.350 -4.908  -3.375 -0.928 1.475  C5  V9F 17 
V9F C6  C18 C 0 1 Y N N N N N -3.473 28.097 -5.484  -4.500 -0.323 0.945  C6  V9F 18 
V9F C7  C19 C 0 1 Y N N N N N -4.515 27.186 -5.497  -5.452 -1.079 0.293  C7  V9F 19 
V9F C8  C20 C 0 1 N N N N N N -2.496 30.361 -4.944  -2.336 -0.095 2.180  C8  V9F 20 
V9F C9  C21 C 0 1 Y N N N N N -0.479 29.165 -3.936  -1.402 1.519  0.498  C9  V9F 21 
V9F N1  N1  N 0 1 N N N N N N -7.519 26.294 -3.786  -7.401 -2.692 -1.029 N1  V9F 22 
V9F N2  N2  N 0 1 Y N N N N N -1.154 29.777 -4.996  -1.336 0.360  1.211  N2  V9F 23 
V9F N3  N3  N 0 1 N N S N N N -0.270 27.772 -2.015  -1.872 3.671  -0.187 N3  V9F 24 
V9F N4  N4  N 0 1 N N N N N N 4.393  27.116 -10.831 6.219  -2.230 -0.438 N4  V9F 25 
V9F N5  N5  N 0 1 N N N N N N 0.682  25.863 -3.004  -0.027 4.915  0.036  N5  V9F 26 
V9F O1  O1  O 0 1 N N N N N N -8.705 25.579 -3.797  -8.377 -3.475 -1.691 O1  V9F 27 
V9F O2  O2  O 0 1 N N N N N N -6.880 25.547 -5.766  -6.150 -4.480 -0.616 O2  V9F 28 
V9F O3  O3  O 0 1 N N N N N N 2.744  29.195 -8.910  3.395  -1.628 -0.663 O3  V9F 29 
V9F O4  O4  O 0 1 N N N N N N 3.179  24.700 -11.738 8.705  -1.378 0.554  O4  V9F 30 
V9F C22 C22 C 0 1 N N N N N N 4.539  24.730 -11.314 7.537  -1.227 1.365  C22 V9F 31 
V9F C23 C23 C 0 1 N N N N N N 4.774  25.806 -10.281 6.523  -2.314 0.998  C23 V9F 32 
V9F C24 C24 C 0 1 Y N N N N N 0.576  29.990 -8.317  1.545  -1.925 0.787  C24 V9F 33 
V9F C25 C25 C 0 1 Y N N N N N -0.445 30.184 -7.422  0.338  -1.522 1.333  C25 V9F 34 
V9F C26 C26 C 0 1 Y N N N N N -0.275 29.721 -6.114  -0.190 -0.314 0.884  C26 V9F 35 
V9F C27 C27 C 0 1 N N N N N N 1.772  26.580 -3.498  0.638  3.889  -0.547 C27 V9F 36 
V9F O5  O5  O 0 1 N N N N N N 2.749  26.043 -3.985  1.845  3.842  -0.446 O5  V9F 37 
V9F C28 C28 C 0 1 N N N N N N 0.769  24.378 -3.001  0.697  6.135  0.403  C28 V9F 38 
V9F C29 C29 C 0 1 N N N N N N -0.455 26.490 -2.501  -1.370 4.820  0.263  C29 V9F 39 
V9F O6  O6  O 0 1 N N N N N N -1.544 25.932 -2.511  -2.030 5.682  0.811  O6  V9F 40 
V9F H1  H1  H 0 1 N N N N N N -0.775 29.819 -1.921  -3.406 2.249  0.082  H1  V9F 41 
V9F H2  H2  H 0 1 N N N N N N -2.063 28.743 -2.561  -2.683 2.889  1.595  H2  V9F 42 
V9F H3  H3  H 0 1 N N N N N N 1.695  27.726 -1.240  -1.448 4.237  -2.220 H3  V9F 43 
V9F H4  H4  H 0 1 N N N N N N 1.109  29.349 -1.738  -2.152 2.589  -2.027 H4  V9F 44 
V9F H5  H5  H 0 1 N N N N N N 3.765  28.188 -2.651  0.799  3.181  -3.218 H5  V9F 45 
V9F H6  H6  H 0 1 N N N N N N 3.553  28.601 -4.386  1.659  1.943  -2.270 H6  V9F 46 
V9F H7  H7  H 0 1 N N N N N N 3.053  29.770 -3.117  0.109  1.549  -3.053 H7  V9F 47 
V9F H8  H8  H 0 1 N N N N N N 2.872  28.401 -6.358  2.230  0.616  -1.380 H8  V9F 48 
V9F H9  H9  H 0 1 N N N N N N 3.520  27.352 -8.339  3.146  -3.657 -0.364 H9  V9F 49 
V9F H10 H10 H 0 1 N N N N N N 4.475  28.787 -7.833  4.018  -2.794 0.925  H10 V9F 50 
V9F H11 H11 H 0 1 N N N N N N 5.750  28.140 -9.592  5.526  -4.212 -0.498 H11 V9F 51 
V9F H12 H12 H 0 1 N N N N N N 4.571  29.179 -10.461 5.081  -3.215 -1.903 H12 V9F 52 
V9F H13 H13 H 0 1 N N N N N N 2.735  28.043 -11.749 7.197  -2.297 -2.297 H13 V9F 53 
V9F H14 H14 H 0 1 N N N N N N 2.336  26.934 -10.394 7.875  -3.370 -1.050 H14 V9F 54 
V9F H15 H15 H 0 1 N N N N N N 3.334  26.177 -13.168 9.374  -1.449 -1.401 H15 V9F 55 
V9F H16 H16 H 0 1 N N N N N N 1.691  25.911 -12.494 8.032  -0.321 -1.090 H16 V9F 56 
V9F H17 H17 H 0 1 N N N N N N -6.829 28.992 -3.835  -4.009 -4.133 0.631  H17 V9F 57 
V9F H18 H18 H 0 1 N N N N N N -4.989 30.621 -3.850  -2.319 -2.763 1.778  H18 V9F 58 
V9F H19 H19 H 0 1 N N N N N N -2.526 27.829 -5.928  -4.632 0.745  1.037  H19 V9F 59 
V9F H20 H20 H 0 1 N N N N N N -4.376 26.229 -5.978  -6.330 -0.605 -0.121 H20 V9F 60 
V9F H21 H21 H 0 1 N N N N N N -2.564 30.983 -4.040  -2.815 0.769  2.640  H21 V9F 61 
V9F H22 H22 H 0 1 N N N N N N -2.629 30.993 -5.835  -1.850 -0.694 2.950  H22 V9F 62 
V9F H23 H23 H 0 1 N N N N N N -7.215 26.737 -2.943  -7.522 -1.732 -0.948 H23 V9F 63 
V9F H25 H25 H 0 1 N N N N N N -8.768 25.081 -4.604  -9.127 -2.966 -2.028 H25 V9F 64 
V9F H26 H26 H 0 1 N N N N N N 4.799  23.754 -10.879 7.808  -1.322 2.416  H26 V9F 65 
V9F H27 H27 H 0 1 N N N N N N 5.181  24.925 -12.186 7.096  -0.245 1.189  H27 V9F 66 
V9F H28 H28 H 0 1 N N N N N N 4.167  25.594 -9.388  5.609  -2.168 1.573  H28 V9F 67 
V9F H29 H29 H 0 1 N N N N N N 5.839  25.821 -10.005 6.943  -3.295 1.224  H29 V9F 68 
V9F H30 H30 H 0 1 N N N N N N 0.464  30.345 -9.331  1.980  -2.857 1.116  H30 V9F 69 
V9F H31 H31 H 0 1 N N N N N N -1.356 30.681 -7.720  -0.171 -2.118 2.076  H31 V9F 70 
V9F H32 H32 H 0 1 N N N N N N -0.158 23.957 -2.586  0.002  6.852  0.841  H32 V9F 71 
V9F H33 H33 H 0 1 N N N N N N 0.907  24.017 -4.031  1.474  5.893  1.127  H33 V9F 72 
V9F H34 H34 H 0 1 N N N N N N 1.623  24.062 -2.384  1.153  6.569  -0.488 H34 V9F 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V9F C21 O4  SING N N 1  
V9F C21 C20 SING N N 2  
V9F O4  C22 SING N N 3  
V9F C22 C23 SING N N 4  
V9F C20 N4  SING N N 5  
V9F N4  C23 SING N N 6  
V9F N4  C19 SING N N 7  
V9F C19 C18 SING N N 8  
V9F O3  C18 SING N N 9  
V9F O3  C17 SING N N 10 
V9F C24 C17 DOUB Y N 11 
V9F C24 C25 SING Y N 12 
V9F C17 C16 SING Y N 13 
V9F C25 C26 DOUB Y N 14 
V9F C16 C15 DOUB Y N 15 
V9F C26 C15 SING Y N 16 
V9F C26 N2  SING Y N 17 
V9F O2  C1  DOUB N N 18 
V9F C15 C14 SING Y N 19 
V9F C7  C6  DOUB Y N 20 
V9F C7  C2  SING Y N 21 
V9F C6  C5  SING Y N 22 
V9F N2  C8  SING N N 23 
V9F N2  C9  SING Y N 24 
V9F C8  C5  SING N N 25 
V9F C5  C4  DOUB Y N 26 
V9F C2  C1  SING N N 27 
V9F C2  C3  DOUB Y N 28 
V9F C1  N1  SING N N 29 
V9F C14 C9  DOUB Y N 30 
V9F C14 C12 SING N N 31 
V9F C4  C3  SING Y N 32 
V9F O5  C27 DOUB N N 33 
V9F C9  C10 SING N N 34 
V9F O1  N1  SING N N 35 
V9F C27 C12 SING N N 36 
V9F C27 N5  SING N N 37 
V9F C13 C12 SING N N 38 
V9F C12 C11 SING N N 39 
V9F N5  C28 SING N N 40 
V9F N5  C29 SING N N 41 
V9F C10 N3  SING N N 42 
V9F O6  C29 DOUB N N 43 
V9F C29 N3  SING N N 44 
V9F N3  C11 SING N N 45 
V9F C10 H1  SING N N 46 
V9F C10 H2  SING N N 47 
V9F C11 H3  SING N N 48 
V9F C11 H4  SING N N 49 
V9F C13 H5  SING N N 50 
V9F C13 H6  SING N N 51 
V9F C13 H7  SING N N 52 
V9F C16 H8  SING N N 53 
V9F C18 H9  SING N N 54 
V9F C18 H10 SING N N 55 
V9F C19 H11 SING N N 56 
V9F C19 H12 SING N N 57 
V9F C20 H13 SING N N 58 
V9F C20 H14 SING N N 59 
V9F C21 H15 SING N N 60 
V9F C21 H16 SING N N 61 
V9F C3  H17 SING N N 62 
V9F C4  H18 SING N N 63 
V9F C6  H19 SING N N 64 
V9F C7  H20 SING N N 65 
V9F C8  H21 SING N N 66 
V9F C8  H22 SING N N 67 
V9F N1  H23 SING N N 68 
V9F O1  H25 SING N N 69 
V9F C22 H26 SING N N 70 
V9F C22 H27 SING N N 71 
V9F C23 H28 SING N N 72 
V9F C23 H29 SING N N 73 
V9F C24 H30 SING N N 74 
V9F C25 H31 SING N N 75 
V9F C28 H32 SING N N 76 
V9F C28 H33 SING N N 77 
V9F C28 H34 SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V9F InChI            InChI                1.06  "InChI=1S/C29H33N5O6/c1-29-18-33(28(37)31(2)27(29)36)17-24-25(29)22-15-21(40-14-11-32-9-12-39-13-10-32)7-8-23(22)34(24)16-19-3-5-20(6-4-19)26(35)30-38/h3-8,15,38H,9-14,16-18H2,1-2H3,(H,30,35)/t29-/m1/s1" 
V9F InChIKey         InChI                1.06  OKUHUZQAZMDBHT-GDLZYMKVSA-N                                                                                                                                                                                 
V9F SMILES_CANONICAL CACTVS               3.385 "CN1C(=O)[N@@]2Cc3n(Cc4ccc(cc4)C(=O)NO)c5ccc(OCCN6CCOCC6)cc5c3[C@@](C)(C2)C1=O"                                                                                                                             
V9F SMILES           CACTVS               3.385 "CN1C(=O)[N]2Cc3n(Cc4ccc(cc4)C(=O)NO)c5ccc(OCCN6CCOCC6)cc5c3[C](C)(C2)C1=O"                                                                                                                                 
V9F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]12CN(Cc3c1c4cc(ccc4n3Cc5ccc(cc5)C(=O)NO)OCCN6CCOCC6)C(=O)N(C2=O)C"                                                                                                                                   
V9F SMILES           "OpenEye OEToolkits" 2.0.7 "CC12CN(Cc3c1c4cc(ccc4n3Cc5ccc(cc5)C(=O)NO)OCCN6CCOCC6)C(=O)N(C2=O)C"                                                                                                                                       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V9F "Create component" 2023-09-11 PDBE 
V9F "Initial release"  2024-08-07 RCSB 
# 
