data_U3F
# 
_chem_comp.id                                    U3F 
_chem_comp.name                                  "4-[bis(fluoranyl)methoxy]-2-[(2~{S})-5-chloranyl-6-fluoranyl-2-[[(4-oxidanylcyclohexyl)amino]methyl]-2-phenyl-3~{H}-1-benzofuran-4-yl]-3-fluoranyl-benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H27 Cl F4 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-24 
_chem_comp.pdbx_modified_date                    2023-04-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        578.982 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     U3F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8CAA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
U3F C1   C1  C  0 1 Y N N 13.833 -0.234  -46.382 -2.305 -2.527 0.404  C1   U3F 1  
U3F C2   C2  C  0 1 Y N N 12.635 -0.936  -46.278 -1.444 -3.521 0.834  C2   U3F 2  
U3F C3   C3  C  0 1 Y N N 12.605 -2.273  -45.883 -0.078 -3.310 0.841  C3   U3F 3  
U3F C11  C4  C  0 1 N N N 15.876 -5.587  -45.678 2.961  0.207  -0.615 C11  U3F 4  
U3F C12  C5  C  0 1 Y N N 14.506 -4.356  -42.421 1.302  1.561  1.916  C12  U3F 5  
U3F C13  C6  C  0 1 Y N N 14.706 -4.513  -41.039 1.398  2.111  3.180  C13  U3F 6  
U3F C14  C7  C  0 1 Y N N 15.910 -5.034  -40.555 2.100  1.449  4.171  C14  U3F 7  
U3F C15  C8  C  0 1 Y N N 16.928 -5.332  -41.463 2.705  0.237  3.897  C15  U3F 8  
U3F C16  C9  C  0 1 Y N N 16.742 -5.122  -42.829 2.609  -0.313 2.632  C16  U3F 9  
U3F C17  C10 C  0 1 Y N N 16.374 -0.192  -46.340 -2.695 -0.229 -0.485 C17  U3F 10 
U3F C19  C11 C  0 1 Y N N 17.206 0.023   -45.242 -3.199 0.700  0.420  C19  U3F 11 
U3F C20  C12 C  0 1 Y N N 18.455 0.616   -45.416 -4.051 1.705  -0.021 C20  U3F 12 
U3F C21  C13 C  0 1 Y N N 18.904 1.020   -46.680 -4.404 1.786  -1.363 C21  U3F 13 
U3F C22  C14 C  0 1 Y N N 18.099 0.763   -47.780 -3.912 0.873  -2.270 C22  U3F 14 
U3F C23  C15 C  0 1 Y N N 16.840 0.154   -47.618 -3.050 -0.140 -1.845 C23  U3F 15 
U3F C24  C16 C  0 1 N N N 16.017 -0.109  -48.855 -2.523 -1.118 -2.813 C24  U3F 16 
U3F C29  C17 C  0 1 N N N 20.576 1.063   -44.253 -5.413 3.617  0.344  C29  U3F 17 
U3F C4   C18 C  0 1 Y N N 13.817 -2.883  -45.584 0.452  -2.093 0.417  C4   U3F 18 
U3F C5   C19 C  0 1 Y N N 15.012 -2.197  -45.728 -0.411 -1.095 -0.008 C5   U3F 19 
U3F C6   C20 C  0 1 Y N N 15.059 -0.869  -46.139 -1.785 -1.303 -0.021 C6   U3F 20 
U3F O7   O1  O  0 1 N N N 13.912 -4.210  -45.197 1.751  -1.690 0.336  O7   U3F 21 
U3F C8   C21 C  0 1 N N S 15.330 -4.393  -44.869 1.798  -0.254 0.265  C8   U3F 22 
U3F C9   C22 C  0 1 N N N 16.135 -3.133  -45.335 0.441  0.100  -0.389 C9   U3F 23 
U3F C10  C23 C  0 1 Y N N 15.524 -4.624  -43.338 1.902  0.346  1.643  C10  U3F 24 
U3F CL18 CL1 CL 0 0 N N N 13.762 1.472   -46.778 -4.019 -2.801 0.388  CL18 U3F 25 
U3F F25  F1  F  0 1 N N N 16.828 -0.370  -44.023 -2.860 0.625  1.725  F25  U3F 26 
U3F O26  O2  O  0 1 N N N 15.655 -1.261  -49.067 -1.772 -1.999 -2.440 O26  U3F 27 
U3F N27  N1  N  0 1 N N N 15.737 0.896   -49.711 -2.873 -1.036 -4.112 N27  U3F 28 
U3F O28  O3  O  0 1 N N N 19.190 0.775   -44.265 -4.542 2.610  0.863  O28  U3F 29 
U3F F30  F2  F  0 1 N N N 20.720 2.391   -44.497 -4.736 4.366  -0.624 F30  U3F 30 
U3F F31  F3  F  0 1 N N N 11.509 -0.306  -46.554 -1.942 -4.706 1.250  F31  U3F 31 
U3F F32  F4  F  0 1 N N N 20.958 0.791   -42.987 -6.534 3.011  -0.235 F32  U3F 32 
U3F N33  N2  N  0 1 N N N 15.103 -6.822  -45.480 4.229  -0.252 -0.031 N33  U3F 33 
U3F C34  C24 C  0 1 N N N 15.139 -7.705  -46.667 5.371  0.174  -0.851 C34  U3F 34 
U3F C35  C25 C  0 1 N N N 14.200 -8.906  -46.477 6.547  -0.777 -0.620 C35  U3F 35 
U3F C36  C26 C  0 1 N N N 14.126 -9.636  -47.832 7.736  -0.333 -1.474 C36  U3F 36 
U3F C37  C27 C  0 1 N N N 15.514 -10.258 -48.084 8.145  1.088  -1.081 C37  U3F 37 
U3F C38  C28 C  0 1 N N N 16.569 -9.130  -48.198 6.969  2.039  -1.312 C38  U3F 38 
U3F C39  C29 C  0 1 N N N 16.574 -8.237  -46.928 5.779  1.595  -0.458 C39  U3F 39 
U3F O40  O4  O  0 1 N N N 15.421 -11.029 -49.297 9.256  1.502  -1.879 O40  U3F 40 
U3F H1   H1  H  0 1 N N N 11.673 -2.815  -45.812 0.584  -4.095 1.178  H1   U3F 41 
U3F H2   H2  H  0 1 N N N 16.916 -5.772  -45.370 2.849  -0.212 -1.615 H2   U3F 42 
U3F H3   H3  H  0 1 N N N 15.851 -5.326  -46.746 2.961  1.295  -0.675 H3   U3F 43 
U3F H4   H4  H  0 1 N N N 13.545 -4.021  -42.781 0.754  2.078  1.142  H4   U3F 44 
U3F H5   H5  H  0 1 N N N 13.926 -4.230  -40.347 0.925  3.058  3.394  H5   U3F 45 
U3F H6   H6  H  0 1 N N N 16.050 -5.203  -39.498 2.175  1.880  5.158  H6   U3F 46 
U3F H7   H7  H  0 1 N N N 17.867 -5.728  -41.105 3.253  -0.280 4.670  H7   U3F 47 
U3F H8   H8  H  0 1 N N N 17.548 -5.345  -43.512 3.082  -1.260 2.418  H8   U3F 48 
U3F H9   H9  H  0 1 N N N 19.854 1.520   -46.795 -5.067 2.570  -1.697 H9   U3F 49 
U3F H10  H10 H  0 1 N N N 18.441 1.032   -48.769 -4.187 0.945  -3.312 H10  U3F 50 
U3F H11  H11 H  0 1 N N N 21.114 0.448   -44.989 -5.733 4.274  1.153  H11  U3F 51 
U3F H12  H12 H  0 1 N N N 16.786 -3.364  -46.191 0.540  0.178  -1.472 H12  U3F 52 
U3F H13  H13 H  0 1 N N N 16.740 -2.716  -44.517 0.034  1.019  0.031  H13  U3F 53 
U3F H14  H14 H  0 1 N N N 15.220 0.711   -50.547 -3.471 -0.333 -4.410 H14  U3F 54 
U3F H15  H15 H  0 1 N N N 16.046 1.825   -49.509 -2.526 -1.680 -4.749 H15  U3F 55 
U3F H16  H16 H  0 1 N N N 14.152 -6.579  -45.289 4.227  -1.253 0.096  H16  U3F 56 
U3F H18  H18 H  0 1 N N N 14.812 -7.140  -47.552 5.089  0.155  -1.903 H18  U3F 57 
U3F H19  H19 H  0 1 N N N 13.199 -8.560  -46.179 6.828  -0.758 0.433  H19  U3F 58 
U3F H20  H20 H  0 1 N N N 14.600 -9.580  -45.705 6.256  -1.789 -0.900 H20  U3F 59 
U3F H21  H21 H  0 1 N N N 13.880 -8.923  -48.633 8.574  -1.011 -1.310 H21  U3F 60 
U3F H22  H22 H  0 1 N N N 13.360 -10.424 -47.795 7.455  -0.352 -2.527 H22  U3F 61 
U3F H23  H23 H  0 1 N N N 15.776 -10.907 -47.235 8.426  1.107  -0.028 H23  U3F 62 
U3F H24  H24 H  0 1 N N N 17.564 -9.581  -48.324 7.260  3.051  -1.031 H24  U3F 63 
U3F H25  H25 H  0 1 N N N 16.335 -8.507  -49.074 6.687  2.020  -2.364 H25  U3F 64 
U3F H26  H26 H  0 1 N N N 16.909 -8.830  -46.064 4.941  2.273  -0.622 H26  U3F 65 
U3F H27  H27 H  0 1 N N N 17.258 -7.389  -47.078 6.061  1.614  0.595  H27  U3F 66 
U3F H28  H28 H  0 1 N N N 14.767 -11.709 -49.191 9.569  2.395  -1.683 H28  U3F 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
U3F N27  C24 SING N N 1  
U3F O40  C37 SING N N 2  
U3F O26  C24 DOUB N N 3  
U3F C24  C23 SING N N 4  
U3F C38  C37 SING N N 5  
U3F C38  C39 SING N N 6  
U3F C37  C36 SING N N 7  
U3F C36  C35 SING N N 8  
U3F C22  C23 DOUB Y N 9  
U3F C22  C21 SING Y N 10 
U3F C23  C17 SING Y N 11 
U3F C39  C34 SING N N 12 
U3F CL18 C1  SING N N 13 
U3F C21  C20 DOUB Y N 14 
U3F C34  C35 SING N N 15 
U3F C34  N33 SING N N 16 
U3F F31  C2  SING N N 17 
U3F C1   C2  DOUB Y N 18 
U3F C1   C6  SING Y N 19 
U3F C17  C6  SING N N 20 
U3F C17  C19 DOUB Y N 21 
U3F C2   C3  SING Y N 22 
U3F C6   C5  DOUB Y N 23 
U3F C3   C4  DOUB Y N 24 
U3F C5   C4  SING Y N 25 
U3F C5   C9  SING N N 26 
U3F C11  N33 SING N N 27 
U3F C11  C8  SING N N 28 
U3F C4   O7  SING N N 29 
U3F C20  C19 SING Y N 30 
U3F C20  O28 SING N N 31 
U3F C9   C8  SING N N 32 
U3F C19  F25 SING N N 33 
U3F O7   C8  SING N N 34 
U3F C8   C10 SING N N 35 
U3F F30  C29 SING N N 36 
U3F O28  C29 SING N N 37 
U3F C29  F32 SING N N 38 
U3F C10  C16 DOUB Y N 39 
U3F C10  C12 SING Y N 40 
U3F C16  C15 SING Y N 41 
U3F C12  C13 DOUB Y N 42 
U3F C15  C14 DOUB Y N 43 
U3F C13  C14 SING Y N 44 
U3F C3   H1  SING N N 45 
U3F C11  H2  SING N N 46 
U3F C11  H3  SING N N 47 
U3F C12  H4  SING N N 48 
U3F C13  H5  SING N N 49 
U3F C14  H6  SING N N 50 
U3F C15  H7  SING N N 51 
U3F C16  H8  SING N N 52 
U3F C21  H9  SING N N 53 
U3F C22  H10 SING N N 54 
U3F C29  H11 SING N N 55 
U3F C9   H12 SING N N 56 
U3F C9   H13 SING N N 57 
U3F N27  H14 SING N N 58 
U3F N27  H15 SING N N 59 
U3F N33  H16 SING N N 60 
U3F C34  H18 SING N N 61 
U3F C35  H19 SING N N 62 
U3F C35  H20 SING N N 63 
U3F C36  H21 SING N N 64 
U3F C36  H22 SING N N 65 
U3F C37  H23 SING N N 66 
U3F C38  H24 SING N N 67 
U3F C38  H25 SING N N 68 
U3F C39  H26 SING N N 69 
U3F C39  H27 SING N N 70 
U3F O40  H28 SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
U3F InChI            InChI                1.06  "InChI=1S/C29H27ClF4N2O4/c30-25-20(31)12-22-19(23(25)24-18(27(35)38)10-11-21(26(24)32)39-28(33)34)13-29(40-22,15-4-2-1-3-5-15)14-36-16-6-8-17(37)9-7-16/h1-5,10-12,16-17,28,36-37H,6-9,13-14H2,(H2,35,38)/t16-,17-,29-/m1/s1" 
U3F InChIKey         InChI                1.06  FXFZYILRQQAUGE-RIYSCVPDSA-N                                                                                                                                                                                                   
U3F SMILES_CANONICAL CACTVS               3.385 "NC(=O)c1ccc(OC(F)F)c(F)c1c2c(Cl)c(F)cc3O[C@@](CN[C@@H]4CC[C@@H](O)CC4)(Cc23)c5ccccc5"                                                                                                                                        
U3F SMILES           CACTVS               3.385 "NC(=O)c1ccc(OC(F)F)c(F)c1c2c(Cl)c(F)cc3O[C](CN[CH]4CC[CH](O)CC4)(Cc23)c5ccccc5"                                                                                                                                              
U3F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@@]2(Cc3c(cc(c(c3c4c(ccc(c4F)OC(F)F)C(=O)N)Cl)F)O2)CNC5CCC(CC5)O"                                                                                                                                                
U3F SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C2(Cc3c(cc(c(c3c4c(ccc(c4F)OC(F)F)C(=O)N)Cl)F)O2)CNC5CCC(CC5)O"                                                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           U3F 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-[bis(fluoranyl)methoxy]-2-[(2~{S})-5-chloranyl-6-fluoranyl-2-[[(4-oxidanylcyclohexyl)amino]methyl]-2-phenyl-3~{H}-1-benzofuran-4-yl]-3-fluoranyl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
U3F "Create component" 2023-01-24 PDBE 
U3F "Initial release"  2023-04-12 RCSB 
# 
