data_NOF
# 
_chem_comp.id                                    NOF 
_chem_comp.name                                  
;tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
;
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C34 H45 Cl Ir N5 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "iridium catalyst for CH activation" 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2022-08-17 
_chem_comp.pdbx_modified_date                    2023-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        847.487 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NOF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AQY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NOF N1   N1  N  1 1 Y N N 3.220  -23.715 13.174 3.220  -23.715 13.174 N1   NOF 1  
NOF N3   N2  N  0 1 N N N 12.018 -28.217 5.698  12.018 -28.217 5.698  N3   NOF 2  
NOF C4   C1  C  0 1 N N N 0.390  -24.185 16.515 0.390  -24.185 16.515 C4   NOF 3  
NOF C5   C2  C  0 1 N N N 2.089  -26.033 16.440 2.089  -26.033 16.440 C5   NOF 4  
NOF C6   C3  C  0 1 N N N 0.966  -27.040 16.570 0.966  -27.040 16.570 C6   NOF 5  
NOF C7   C4  C  0 1 N N N 3.433  -26.230 16.299 3.433  -26.230 16.299 C7   NOF 6  
NOF C8   C5  C  0 1 N N N 4.218  -27.507 16.315 4.218  -27.507 16.315 C8   NOF 7  
NOF C10  C6  C  0 1 N N N 5.478  -24.619 16.097 5.478  -24.619 16.097 C10  NOF 8  
NOF C13  C7  C  0 1 Y N N 5.467  -26.456 11.337 5.467  -26.456 11.337 C13  NOF 9  
NOF C15  C8  C  0 1 Y N N 6.079  -25.579 10.341 6.079  -25.579 10.341 C15  NOF 10 
NOF C17  C9  C  0 1 Y N N 4.392  -22.099 11.066 4.392  -22.099 11.066 C17  NOF 11 
NOF C20  C10 C  0 1 N N N 6.551  -24.074 7.911  6.551  -24.074 7.911  C20  NOF 12 
NOF C21  C11 C  0 1 N N N 7.377  -23.417 6.784  7.377  -23.417 6.784  C21  NOF 13 
NOF C22  C12 C  0 1 N N N 8.166  -24.569 6.091  8.166  -24.569 6.091  C22  NOF 14 
NOF C24  C13 C  0 1 N N N 9.997  -26.285 6.522  9.997  -26.285 6.522  C24  NOF 15 
NOF C26  C14 C  0 1 N N S 11.627 -28.226 7.049  11.627 -28.226 7.049  C26  NOF 16 
NOF C28  C15 C  0 1 N N R 12.973 -28.590 7.940  12.973 -28.590 7.940  C28  NOF 17 
NOF C1   C16 C  0 1 N N N 2.957  -24.016 16.211 2.957  -24.016 16.211 C1   NOF 18 
NOF C2   C17 C  0 1 N N N 3.076  -22.514 16.209 3.076  -22.514 16.209 C2   NOF 19 
NOF C3   C18 C  0 1 N N N 1.815  -24.727 16.397 1.815  -24.727 16.397 C3   NOF 20 
NOF C9   C19 C  0 1 N N N 4.015  -24.950 16.219 4.015  -24.950 16.219 C9   NOF 21 
NOF C11  C20 C  0 1 Y N N 4.500  -25.855 12.311 4.500  -25.855 12.311 C11  NOF 22 
NOF C12  C21 C  0 1 Y N N 4.141  -24.363 12.221 4.141  -24.363 12.221 C12  NOF 23 
NOF IR1  IR1 IR 0 0 N N N 2.696  -25.348 14.399 2.696  -25.348 14.399 IR1  NOF 24 
NOF C14  C22 C  0 1 Y N N 4.756  -23.528 11.156 4.756  -23.528 11.156 C14  NOF 25 
NOF C16  C23 C  0 1 Y N N 5.697  -24.143 10.213 5.697  -24.143 10.213 C16  NOF 26 
NOF C18  C24 C  0 1 Y N N 2.803  -22.327 13.092 2.803  -22.327 13.092 C18  NOF 27 
NOF C19  C25 C  0 1 Y N N 3.431  -21.526 12.034 3.431  -21.526 12.034 C19  NOF 28 
NOF N2   N3  N  0 1 N N N 6.426  -23.370 9.201  6.426  -23.370 9.201  N2   NOF 29 
NOF O1   O1  O  0 1 N N N 5.818  -25.272 7.693  5.818  -25.272 7.693  O1   NOF 30 
NOF C23  C26 C  0 1 N N N 9.051  -25.237 7.147  9.051  -25.237 7.147  C23  NOF 31 
NOF C25  C27 C  0 1 N N S 10.991 -26.907 7.496  10.991 -26.907 7.496  C25  NOF 32 
NOF S1   S1  S  0 1 N N N 12.520 -25.920 7.844  12.520 -25.920 7.844  S1   NOF 33 
NOF C27  C28 C  0 1 N N N 13.240 -27.184 8.696  13.240 -27.184 8.696  C27  NOF 34 
NOF N4   N4  N  0 1 N N N 13.855 -28.747 6.785  13.855 -28.747 6.785  N4   NOF 35 
NOF C29  C29 C  0 1 N N N 13.369 -28.586 5.624  13.369 -28.586 5.624  C29  NOF 36 
NOF O2   O2  O  0 1 N N N 14.030 -28.648 4.458  14.030 -28.648 4.458  O2   NOF 37 
NOF N5   N5  N  0 1 N N N 3.884  -26.747 13.295 3.884  -26.747 13.295 N5   NOF 38 
NOF C30  C30 C  0 1 N N N 3.117  -27.904 12.630 3.117  -27.904 12.630 C30  NOF 39 
NOF O3   O3  O  0 1 N N N 2.094  -28.368 13.170 2.094  -28.368 13.170 O3   NOF 40 
NOF O4   O4  O  0 1 N N N 3.186  -28.069 11.172 3.186  -28.069 11.172 O4   NOF 41 
NOF C31  C31 C  0 1 N N N 2.098  -27.597 10.325 2.098  -27.597 10.325 C31  NOF 42 
NOF C32  C32 C  0 1 N N N 0.746  -28.320 10.587 0.746  -28.320 10.587 C32  NOF 43 
NOF C33  C33 C  0 1 N N N 1.865  -26.069 10.378 1.865  -26.069 10.378 C33  NOF 44 
NOF C34  C34 C  0 1 N N N 2.577  -27.878 8.887  2.577  -27.878 8.887  C34  NOF 45 
NOF CL46 CL1 CL 0 0 N N N 0.244  -25.776 13.207 0.244  -25.776 13.207 CL46 NOF 46 
NOF H1   H1  H  0 1 N N N 11.432 -27.986 4.921  11.432 -27.986 4.921  H1   NOF 47 
NOF H2   H2  H  0 1 N N N 0.409  -23.087 16.453 0.408  -23.087 16.453 H2   NOF 48 
NOF H3   H3  H  0 1 N N N -0.224 -24.588 15.696 -0.224 -24.588 15.696 H3   NOF 49 
NOF H4   H4  H  0 1 N N N -0.040 -24.490 17.480 -0.040 -24.490 17.480 H4   NOF 50 
NOF H5   H5  H  0 1 N N N 0.007  -26.510 16.667 0.007  -26.510 16.667 H5   NOF 51 
NOF H6   H6  H  0 1 N N N 0.943  -27.680 15.676 0.942  -27.680 15.676 H6   NOF 52 
NOF H7   H7  H  0 1 N N N 1.133  -27.662 17.462 1.133  -27.662 17.462 H7   NOF 53 
NOF H8   H8  H  0 1 N N N 5.285  -27.284 16.171 5.285  -27.284 16.171 H8   NOF 54 
NOF H9   H9  H  0 1 N N N 4.077  -28.012 17.282 4.076  -28.012 17.282 H9   NOF 55 
NOF H10  H10 H  0 1 N N N 3.868  -28.163 15.504 3.868  -28.163 15.504 H10  NOF 56 
NOF H11  H11 H  0 1 N N N 5.605  -23.527 16.057 5.605  -23.527 16.057 H11  NOF 57 
NOF H12  H12 H  0 1 N N N 6.018  -25.020 16.967 6.018  -25.020 16.967 H12  NOF 58 
NOF H13  H13 H  0 1 N N N 5.880  -25.069 15.177 5.880  -25.069 15.177 H13  NOF 59 
NOF H14  H14 H  0 1 N N N 5.705  -27.509 11.370 5.705  -27.509 11.370 H14  NOF 60 
NOF H15  H15 H  0 1 N N N 6.830  -25.983 9.678  6.830  -25.983 9.678  H15  NOF 61 
NOF H16  H16 H  0 1 N N N 4.825  -21.476 10.298 4.825  -21.476 10.298 H16  NOF 62 
NOF H17  H17 H  0 1 N N N 6.710  -22.924 6.061  6.710  -22.924 6.061  H17  NOF 63 
NOF H18  H18 H  0 1 N N N 8.074  -22.677 7.204  8.074  -22.677 7.204  H18  NOF 64 
NOF H19  H19 H  0 1 N N N 7.463  -25.305 5.673  7.463  -25.305 5.673  H19  NOF 65 
NOF H20  H20 H  0 1 N N N 8.792  -24.160 5.284  8.792  -24.160 5.284  H20  NOF 66 
NOF H21  H21 H  0 1 N N N 9.382  -27.092 6.098  9.382  -27.092 6.098  H21  NOF 67 
NOF H22  H22 H  0 1 N N N 10.566 -25.796 5.717  10.566 -25.796 5.717  H22  NOF 68 
NOF H23  H23 H  0 1 N N N 10.902 -29.034 7.224  10.902 -29.034 7.223  H23  NOF 69 
NOF H24  H24 H  0 1 N N N 12.850 -29.455 8.608  12.850 -29.455 8.608  H24  NOF 70 
NOF H25  H25 H  0 1 N N N 4.124  -22.229 16.034 4.124  -22.229 16.034 H25  NOF 71 
NOF H26  H26 H  0 1 N N N 2.444  -22.097 15.411 2.444  -22.097 15.411 H26  NOF 72 
NOF H27  H27 H  0 1 N N N 2.746  -22.119 17.181 2.746  -22.119 17.181 H27  NOF 73 
NOF H28  H28 H  0 1 N N N 2.074  -21.908 13.769 2.074  -21.908 13.769 H28  NOF 74 
NOF H29  H29 H  0 1 N N N 3.182  -20.478 11.959 3.182  -20.478 11.959 H29  NOF 75 
NOF H30  H30 H  0 1 N N N 6.800  -22.458 9.369  6.800  -22.458 9.369  H30  NOF 76 
NOF H31  H31 H  0 1 N N N 9.655  -24.465 7.646  9.655  -24.465 7.646  H31  NOF 77 
NOF H32  H32 H  0 1 N N N 8.408  -25.735 7.888  8.408  -25.735 7.888  H32  NOF 78 
NOF H33  H33 H  0 1 N N N 10.502 -27.053 8.470  10.502 -27.053 8.470  H33  NOF 79 
NOF H34  H34 H  0 1 N N N 12.813 -27.229 9.709  12.813 -27.229 9.709  H34  NOF 80 
NOF H35  H35 H  0 1 N N N 14.324 -27.007 8.762  14.324 -27.007 8.762  H35  NOF 81 
NOF H36  H36 H  0 1 N N N 14.821 -28.976 6.907  14.821 -28.976 6.907  H36  NOF 82 
NOF H37  H37 H  0 1 N N N -0.024 -27.914 9.915  -0.024 -27.913 9.915  H37  NOF 83 
NOF H38  H38 H  0 1 N N N 0.864  -29.397 10.400 0.864  -29.397 10.400 H38  NOF 84 
NOF H39  H39 H  0 1 N N N 0.442  -28.161 11.632 0.442  -28.161 11.632 H39  NOF 85 
NOF H40  H40 H  0 1 N N N 1.031  -25.802 9.713  1.031  -25.802 9.713  H40  NOF 86 
NOF H41  H41 H  0 1 N N N 1.622  -25.771 11.409 1.622  -25.771 11.409 H41  NOF 87 
NOF H42  H42 H  0 1 N N N 2.777  -25.548 10.050 2.776  -25.548 10.050 H42  NOF 88 
NOF H43  H43 H  0 1 N N N 1.808  -27.549 8.173  1.808  -27.549 8.173  H43  NOF 89 
NOF H44  H44 H  0 1 N N N 3.511  -27.329 8.698  3.511  -27.329 8.698  H44  NOF 90 
NOF H45  H45 H  0 1 N N N 2.754  -28.957 8.764  2.754  -28.957 8.764  H45  NOF 91 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NOF N1  C12  SING Y N 1   
NOF N1  IR1  SING N N 2   
NOF N1  C18  DOUB Y N 3   
NOF N3  C26  SING N N 4   
NOF N3  C29  SING N N 5   
NOF C4  C3   SING N N 6   
NOF C5  C6   SING N N 7   
NOF C5  C7   SING N N 8   
NOF C5  C3   SING N N 9   
NOF C5  IR1  SING N N 10  
NOF C7  C8   SING N N 11  
NOF C7  C9   SING N N 12  
NOF C7  IR1  SING N N 13  
NOF C10 C9   SING N N 14  
NOF C13 C15  SING Y N 15  
NOF C13 C11  DOUB Y N 16  
NOF C15 C16  DOUB Y N 17  
NOF C17 C14  SING Y N 18  
NOF C17 C19  DOUB Y N 19  
NOF C20 C21  SING N N 20  
NOF C20 N2   SING N N 21  
NOF C20 O1   DOUB N N 22  
NOF C21 C22  SING N N 23  
NOF C22 C23  SING N N 24  
NOF C24 C23  SING N N 25  
NOF C24 C25  SING N N 26  
NOF C26 C28  SING N N 27  
NOF C26 C25  SING N N 28  
NOF C28 C27  SING N N 29  
NOF C28 N4   SING N N 30  
NOF C1  C2   SING N N 31  
NOF C1  C3   SING N N 32  
NOF C1  C9   SING N N 33  
NOF C1  IR1  SING N N 34  
NOF C3  IR1  SING N N 35  
NOF C9  IR1  SING N N 36  
NOF C11 C12  SING Y N 37  
NOF C11 N5   SING N N 38  
NOF C12 C14  DOUB Y N 39  
NOF IR1 N5   SING N N 40  
NOF C14 C16  SING Y N 41  
NOF C16 N2   SING N N 42  
NOF C18 C19  SING Y N 43  
NOF C25 S1   SING N N 44  
NOF S1  C27  SING N N 45  
NOF N4  C29  SING N N 46  
NOF C29 O2   DOUB N N 47  
NOF N5  C30  SING N N 48  
NOF C30 O3   DOUB N N 49  
NOF C30 O4   SING N N 50  
NOF O4  C31  SING N N 51  
NOF C31 C32  SING N N 52  
NOF C31 C33  SING N N 53  
NOF C31 C34  SING N N 54  
NOF IR1 CL46 SING N N 55  
NOF N3  H1   SING N N 56  
NOF C4  H2   SING N N 57  
NOF C4  H3   SING N N 58  
NOF C4  H4   SING N N 59  
NOF C6  H5   SING N N 60  
NOF C6  H6   SING N N 61  
NOF C6  H7   SING N N 62  
NOF C8  H8   SING N N 63  
NOF C8  H9   SING N N 64  
NOF C8  H10  SING N N 65  
NOF C10 H11  SING N N 66  
NOF C10 H12  SING N N 67  
NOF C10 H13  SING N N 68  
NOF C13 H14  SING N N 69  
NOF C15 H15  SING N N 70  
NOF C17 H16  SING N N 71  
NOF C21 H17  SING N N 72  
NOF C21 H18  SING N N 73  
NOF C22 H19  SING N N 74  
NOF C22 H20  SING N N 75  
NOF C24 H21  SING N N 76  
NOF C24 H22  SING N N 77  
NOF C26 H23  SING N N 78  
NOF C28 H24  SING N N 79  
NOF C2  H25  SING N N 80  
NOF C2  H26  SING N N 81  
NOF C2  H27  SING N N 82  
NOF C18 H28  SING N N 83  
NOF C19 H29  SING N N 84  
NOF N2  H30  SING N N 85  
NOF C23 H31  SING N N 86  
NOF C23 H32  SING N N 87  
NOF C25 H33  SING N N 88  
NOF C27 H34  SING N N 89  
NOF C27 H35  SING N N 90  
NOF N4  H36  SING N N 91  
NOF C32 H37  SING N N 92  
NOF C32 H38  SING N N 93  
NOF C32 H39  SING N N 94  
NOF C33 H40  SING N N 95  
NOF C33 H41  SING N N 96  
NOF C33 H42  SING N N 97  
NOF C34 H43  SING N N 98  
NOF C34 H44  SING N N 99  
NOF C34 H45  SING N N 100 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NOF InChI            InChI                1.06  "InChI=1S/C24H31N5O4S.C10H15.ClH.Ir/c1-24(2,3)33-23(32)28-16-11-10-15(14-7-6-12-25-20(14)16)26-19(30)9-5-4-8-18-21-17(13-34-18)27-22(31)29-21;1-6-7(2)9(4)10(5)8(6)3;;/h6-7,10-12,17-18,21H,4-5,8-9,13H2,1-3H3,(H4,25,26,27,28,29,30,31,32);1-5H3;1H;/q;;;+3/p-2/t17-,18-,21-;;;/m0.../s1" 
NOF InChIKey         InChI                1.06  NIFXELQADIYDEE-HVXVAELJSA-L                                                                                                                                                                                                                                                                
NOF SMILES_CANONICAL CACTVS               3.385 "CC1C(C)C(C)C(C)C1C.CC(C)(C)OC(=O)N2[Ir](Cl)[n+]3cccc4c(NC(=O)CCCC[C@@H]5SC[C@@H]6NC(=O)N[C@H]56)ccc2c34"                                                                                                                                                                                  
NOF SMILES           CACTVS               3.385 "CC1C(C)C(C)C(C)C1C.CC(C)(C)OC(=O)N2[Ir](Cl)[n+]3cccc4c(NC(=O)CCCC[CH]5SC[CH]6NC(=O)N[CH]56)ccc2c34"                                                                                                                                                                                       
NOF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC12C3([Ir]1456(C2(C4(C53C)C)C)([n+]7cccc8c7c(ccc8NC(=O)CCCC[C@H]9[C@@H]1[C@H](CS9)NC(=O)N1)N6C(=O)OC(C)(C)C)Cl)C"                                                                                                                                                                        
NOF SMILES           "OpenEye OEToolkits" 2.0.7 "CC12C3([Ir]1456(C2(C4(C53C)C)C)([n+]7cccc8c7c(ccc8NC(=O)CCCCC9C1C(CS9)NC(=O)N1)N6C(=O)OC(C)(C)C)Cl)C"                                                                                                                                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           NOF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        
;~{tert}-butyl 7'-[5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
;
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      NOF 
_pdbx_chem_comp_synonyms.name         "iridium catalyst for CH activation" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NOF "Create component"  2022-08-18 PDBE 
NOF "Initial release"   2023-08-23 RCSB 
NOF "Modify descriptor" 2023-09-23 RCSB 
# 
