data_I0F
# 
_chem_comp.id                                    I0F 
_chem_comp.name                                  "2-cyano-3-[4-(dimethylamino)phenyl]-~{N}-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]propanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H23 N3 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-02-08 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        377.392 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I0F 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q5I 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I0F N1  N1  N 0 1 N N N 34.461 23.454 28.738 -1.358 0.325  -0.116 N1  I0F 1  
I0F C4  C1  C 0 1 N N S 32.403 21.029 25.946 -5.562 0.183  -0.382 C4  I0F 2  
I0F C5  C2  C 0 1 N N R 32.234 20.862 27.470 -4.748 -1.080 -0.093 C5  I0F 3  
I0F C6  C3  C 0 1 N N N 32.097 19.398 27.869 -5.299 -2.243 -0.920 C6  I0F 4  
I0F C7  C4  C 0 1 N N N 34.176 23.882 29.969 -0.390 -0.300 0.581  C7  I0F 5  
I0F C8  C5  C 0 1 N N N 35.351 24.489 30.748 1.016  -0.169 0.169  C8  I0F 6  
I0F C10 C6  C 0 1 Y N N 36.020 25.433 33.066 3.414  -0.548 0.577  C10 I0F 7  
I0F C13 C7  C 0 1 Y N N 37.586 26.761 35.008 6.073  -0.052 0.012  C13 I0F 8  
I0F C15 C8  C 0 1 Y N N 37.333 25.817 32.755 3.821  0.733  0.174  C15 I0F 9  
I0F C17 C9  C 0 1 N N N 39.624 28.031 35.568 8.376  -0.904 -0.271 C17 I0F 10 
I0F C16 C10 C 0 1 N N N 37.689 27.818 37.223 7.852  1.560  -0.577 C16 I0F 11 
I0F N13 N2  N 0 1 N N N 38.331 27.444 35.952 7.409  0.197  -0.273 N13 I0F 12 
I0F C14 C11 C 0 1 Y N N 38.093 26.478 33.722 5.135  0.972  -0.105 C14 I0F 13 
I0F C12 C12 C 0 1 Y N N 36.278 26.348 35.303 5.674  -1.326 0.412  C12 I0F 14 
I0F C11 C13 C 0 1 Y N N 35.517 25.694 34.335 4.361  -1.576 0.693  C11 I0F 15 
I0F C9  C14 C 0 1 N N N 35.126 24.799 32.193 2.007  -0.809 0.883  C9  I0F 16 
I0F C88 C15 C 0 1 N N N 36.591 24.509 30.105 1.355  0.624  -0.974 C88 I0F 17 
I0F N88 N3  N 0 1 N N N 37.532 24.524 29.506 1.625  1.252  -1.881 N88 I0F 18 
I0F O7  O1  O 0 1 N N N 33.050 23.858 30.450 -0.678 -0.974 1.553  O7  I0F 19 
I0F C1  C16 C 0 1 N N R 33.411 22.876 27.893 -2.758 0.199  0.298  C1  I0F 20 
I0F O5  O2  O 0 1 N N N 33.373 21.417 28.156 -3.380 -0.854 -0.439 O5  I0F 21 
I0F O6  O3  O 0 1 N N N 33.206 18.653 27.362 -4.616 -3.447 -0.564 O6  I0F 22 
I0F O4  O4  O 0 1 N N N 31.218 20.582 25.280 -6.919 -0.021 0.016  O4  I0F 23 
I0F C3  C17 C 0 1 N N S 32.645 22.489 25.577 -4.967 1.356  0.404  C3  I0F 24 
I0F O3  O5  O 0 1 N N N 32.959 22.578 24.194 -5.675 2.555  0.083  O3  I0F 25 
I0F C2  C18 C 0 1 N N R 33.776 23.089 26.436 -3.492 1.515  0.024  C2  I0F 26 
I0F O2  O6  O 0 1 N N N 33.890 24.496 26.208 -2.907 2.559  0.804  O2  I0F 27 
I0F H13 H1  H 0 1 N N N 35.395 23.528 28.390 -1.128 0.862  -0.891 H13 I0F 28 
I0F H41 H2  H 0 1 N N N 33.268 20.432 25.621 -5.525 0.404  -1.449 H41 I0F 29 
I0F H5  H3  H 0 1 N N N 31.322 21.395 27.777 -4.819 -1.323 0.968  H5  I0F 30 
I0F H62 H4  H 0 1 N N N 31.163 18.992 27.453 -6.365 -2.358 -0.722 H62 I0F 31 
I0F H61 H5  H 0 1 N N N 32.075 19.319 28.966 -5.147 -2.039 -1.980 H61 I0F 32 
I0F H15 H7  H 0 1 N N N 37.750 25.604 31.782 3.095  1.527  0.083  H15 I0F 33 
I0F H9N H8  H 0 1 N N N 40.073 28.532 36.438 8.433  -1.340 -1.268 H9N I0F 34 
I0F H9O H9  H 0 1 N N N 40.297 27.236 35.215 9.357  -0.525 0.017  H9O I0F 35 
I0F H17 H10 H 0 1 N N N 39.469 28.764 34.763 8.058  -1.666 0.441  H17 I0F 36 
I0F H9M H11 H 0 1 N N N 38.413 28.351 37.857 6.987  2.221  -0.622 H9M I0F 37 
I0F H16 H12 H 0 1 N N N 36.828 28.472 37.020 8.531  1.903  0.203  H16 I0F 38 
I0F H9L H13 H 0 1 N N N 37.346 26.910 37.741 8.367  1.569  -1.538 H9L I0F 39 
I0F H14 H14 H 0 1 N N N 39.100 26.782 33.478 5.450  1.957  -0.416 H14 I0F 40 
I0F H12 H15 H 0 1 N N N 35.860 26.537 36.281 6.404  -2.117 0.500  H12 I0F 41 
I0F H11 H16 H 0 1 N N N 34.512 25.382 34.577 4.053  -2.564 1.003  H11 I0F 42 
I0F H9  H18 H 0 1 N N N 34.174 24.503 32.608 1.744  -1.503 1.668  H9  I0F 43 
I0F H1  H19 H 0 1 N N N 32.435 23.335 28.111 -2.802 -0.027 1.363  H1  I0F 44 
I0F H63 H20 H 0 1 N N N 33.117 17.741 27.613 -4.915 -4.227 -1.051 H63 I0F 45 
I0F H42 H21 H 0 1 N N N 31.054 19.673 25.501 -7.493 0.742  -0.139 H42 I0F 46 
I0F H31 H22 H 0 1 N N N 31.724 23.054 25.784 -5.049 1.157  1.472  H31 I0F 47 
I0F H32 H23 H 0 1 N N N 33.110 23.486 23.961 -5.351 3.339  0.546  H32 I0F 48 
I0F H21 H24 H 0 1 N N N 34.721 22.574 26.209 -3.413 1.762  -1.035 H21 I0F 49 
I0F H22 H25 H 0 1 N N N 34.590 24.848 26.744 -1.972 2.715  0.616  H22 I0F 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I0F O3  C3  SING N N 1  
I0F O4  C4  SING N N 2  
I0F C3  C4  SING N N 3  
I0F C3  C2  SING N N 4  
I0F C4  C5  SING N N 5  
I0F O2  C2  SING N N 6  
I0F C2  C1  SING N N 7  
I0F O6  C6  SING N N 8  
I0F C5  C6  SING N N 9  
I0F C5  O5  SING N N 10 
I0F C1  O5  SING N N 11 
I0F C1  N1  SING N N 12 
I0F N1  C7  SING N N 13 
I0F N88 C88 TRIP N N 14 
I0F C7  O7  DOUB N N 15 
I0F C7  C8  SING N N 16 
I0F C88 C8  SING N N 17 
I0F C8  C9  DOUB N E 18 
I0F C9  C10 SING N N 19 
I0F C15 C10 DOUB Y N 20 
I0F C15 C14 SING Y N 21 
I0F C10 C11 SING Y N 22 
I0F C14 C13 DOUB Y N 23 
I0F C11 C12 DOUB Y N 24 
I0F C13 C12 SING Y N 25 
I0F C13 N13 SING N N 26 
I0F C17 N13 SING N N 27 
I0F N13 C16 SING N N 28 
I0F N1  H13 SING N N 29 
I0F C4  H41 SING N N 30 
I0F C5  H5  SING N N 31 
I0F C6  H62 SING N N 32 
I0F C6  H61 SING N N 33 
I0F C15 H15 SING N N 34 
I0F C17 H9N SING N N 35 
I0F C17 H9O SING N N 36 
I0F C17 H17 SING N N 37 
I0F C16 H9M SING N N 38 
I0F C16 H16 SING N N 39 
I0F C16 H9L SING N N 40 
I0F C14 H14 SING N N 41 
I0F C12 H12 SING N N 42 
I0F C11 H11 SING N N 43 
I0F C9  H9  SING N N 44 
I0F C1  H1  SING N N 45 
I0F O6  H63 SING N N 46 
I0F O4  H42 SING N N 47 
I0F C3  H31 SING N N 48 
I0F O3  H32 SING N N 49 
I0F C2  H21 SING N N 50 
I0F O2  H22 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I0F InChI            InChI                1.06  "InChI=1S/C18H23N3O6/c1-21(2)12-5-3-10(4-6-12)7-11(8-19)17(26)20-18-16(25)15(24)14(23)13(9-22)27-18/h3-7,13-16,18,22-25H,9H2,1-2H3,(H,20,26)/b11-7+/t13-,14-,15+,16-,18-/m1/s1" 
I0F InChIKey         InChI                1.06  QKTHDRCOMWPULY-NBXQZZMVSA-N                                                                                                                                                     
I0F SMILES_CANONICAL CACTVS               3.385 "CN(C)c1ccc(cc1)/C=C(C#N)/C(=O)N[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O"                                                                                                      
I0F SMILES           CACTVS               3.385 "CN(C)c1ccc(cc1)C=C(C#N)C(=O)N[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O"                                                                                                               
I0F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc(cc1)/C=C(\C#N)/C(=O)N[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O"                                                                                                   
I0F SMILES           "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc(cc1)C=C(C#N)C(=O)NC2C(C(C(C(O2)CO)O)O)O"                                                                                                                            
# 
_pdbx_chem_comp_identifier.comp_id           I0F 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(~{E})-2-cyano-3-[4-(dimethylamino)phenyl]-~{N}-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]prop-2-enamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I0F "Create component"   2022-02-08 PDBE 
I0F "Modify coordinates" 2022-02-24 PDBE 
I0F "Initial release"    2022-03-02 RCSB 
I0F "Modify descriptor"  2022-08-22 RCSB 
# 
