data_D5F
#

_chem_comp.id                                   D5F
_chem_comp.name                                 "3-[[(1~{S},3~{S})-3-methylcyclohexyl]methyl]-6,8-bis(oxidanyl)isochromen-1-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H20 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-07-03
_chem_comp.pdbx_modified_date                   2020-04-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       288.338
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    D5F
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6KCN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
D5F  C11  C1   C  0  1  N  N  S   7.693  14.782   -3.699  -2.672   0.501   0.393  C11  D5F   1  
D5F  C12  C2   C  0  1  N  N  S   5.179  14.352   -3.765  -5.027   0.790  -0.390  C12  D5F   2  
D5F  C13  C3   C  0  1  N  N  N   4.951  15.073   -2.440  -5.115  -0.710  -0.678  C13  D5F   3  
D5F  C1   C4   C  0  1  Y  N  N  10.342  10.490   -7.675   3.374  -0.985  -0.298  C1   D5F   4  
D5F  C10  C5   C  0  1  N  N  N   8.269  15.109   -5.073  -1.702   0.741   1.552  C10  D5F   5  
D5F  C2   C6   C  0  1  Y  N  N  10.280  10.401   -9.062   4.372  -0.063  -0.562  C2   D5F   6  
D5F  C3   C7   C  0  1  Y  N  N   9.718  11.436   -9.800   4.130   1.301  -0.428  C3   D5F   7  
D5F  C4   C8   C  0  1  Y  N  N   9.216  12.560   -9.156   2.886   1.767  -0.030  C4   D5F   8  
D5F  C5   C9   C  0  1  Y  N  N   9.277  12.645   -7.771   1.871   0.859   0.238  C5   D5F   9  
D5F  C6   C10  C  0  1  N  N  N   8.780  13.763   -7.115   0.525   1.267   0.657  C6   D5F  10  
D5F  C7   C11  C  0  1  N  N  N   8.829  13.865   -5.727  -0.312   0.333   1.137  C7   D5F  11  
D5F  C8   C12  C  0  1  N  N  N   9.887  11.736   -5.554   1.000  -1.432   0.413  C8   D5F  12  
D5F  C9   C13  C  0  1  Y  N  N   9.837  11.613   -7.034   2.117  -0.532   0.107  C9   D5F  13  
D5F  C14  C14  C  0  1  N  N  N   6.218  15.738   -1.913  -3.729  -1.240  -1.054  C14  D5F  14  
D5F  C15  C15  C  0  1  N  N  N   7.184  16.063   -3.046  -2.760  -0.999   0.105  C15  D5F  15  
D5F  C16  C16  C  0  1  N  N  N   4.113  13.281   -3.964  -4.523   1.520  -1.636  C16  D5F  16  
D5F  C17  C17  C  0  1  N  N  N   6.577  13.741   -3.806  -4.057   1.030   0.769  C17  D5F  17  
D5F  O1   O1   O  0  1  N  N  N  10.889   9.480   -6.943   3.613  -2.313  -0.436  O1   D5F  18  
D5F  O2   O2   O  0  1  N  N  N   9.658  11.352  -11.158   5.125   2.187  -0.689  O2   D5F  19  
D5F  O3   O3   O  0  1  N  N  N   9.380  12.864   -4.961   0.053  -0.959   1.260  O3   D5F  20  
D5F  O4   O4   O  0  1  N  N  N  10.387  10.819   -4.864   0.930  -2.550  -0.062  O4   D5F  21  
D5F  H1   H1   H  0  1  N  N  N   8.497  14.367   -3.073  -2.313   1.021  -0.495  H1   D5F  22  
D5F  H2   H2   H  0  1  N  N  N   5.094  15.085   -4.581  -6.014   1.167  -0.122  H2   D5F  23  
D5F  H3   H3   H  0  1  N  N  N   4.182  15.845   -2.586  -5.474  -1.230   0.210  H3   D5F  24  
D5F  H4   H4   H  0  1  N  N  N   4.600  14.342   -1.696  -5.806  -0.881  -1.504  H4   D5F  25  
D5F  H5   H5   H  0  1  N  N  N   9.073  15.851   -4.960  -1.707   1.799   1.816  H5   D5F  26  
D5F  H6   H6   H  0  1  N  N  N   7.473  15.524   -5.709  -2.013   0.151   2.414  H6   D5F  27  
D5F  H7   H7   H  0  1  N  N  N  10.668   9.528   -9.565   5.348  -0.405  -0.874  H7   D5F  28  
D5F  H8   H8   H  0  1  N  N  N   8.780  13.364   -9.730   2.708   2.828   0.071  H8   D5F  29  
D5F  H9   H9   H  0  1  N  N  N   8.348  14.568   -7.691   0.213   2.298   0.582  H9   D5F  30  
D5F  H10  H10  H  0  1  N  N  N   6.712  15.057   -1.205  -3.792  -2.308  -1.260  H10  D5F  31  
D5F  H11  H11  H  0  1  N  N  N   5.945  16.670   -1.396  -3.370  -0.719  -1.942  H11  D5F  32  
D5F  H12  H12  H  0  1  N  N  N   8.038  16.628   -2.643  -1.773  -1.376  -0.163  H12  D5F  33  
D5F  H13  H13  H  0  1  N  N  N   6.665  16.672   -3.801  -3.119  -1.519   0.993  H13  D5F  34  
D5F  H14  H14  H  0  1  N  N  N   3.116  13.745   -3.931  -5.213   1.349  -2.462  H14  D5F  35  
D5F  H15  H15  H  0  1  N  N  N   4.259  12.796   -4.940  -4.460   2.589  -1.431  H15  D5F  36  
D5F  H16  H16  H  0  1  N  N  N   4.195  12.530   -3.165  -3.536   1.143  -1.904  H16  D5F  37  
D5F  H17  H17  H  0  1  N  N  N   6.675  13.036   -2.967  -4.416   0.510   1.657  H17  D5F  38  
D5F  H18  H18  H  0  1  N  N  N   6.694  13.199   -4.756  -3.994   2.099   0.974  H18  D5F  39  
D5F  H19  H19  H  0  1  N  N  N  10.849   9.700   -6.020   3.426  -2.657  -1.321  H19  D5F  40  
D5F  H20  H20  H  0  1  N  N  N  10.039  10.530  -11.442   5.669   2.406   0.080  H20  D5F  41  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D5F  O2   C3   SING  N  N   1  
D5F  C3   C4   DOUB  Y  N   2  
D5F  C3   C2   SING  Y  N   3  
D5F  C4   C5   SING  Y  N   4  
D5F  C2   C1   DOUB  Y  N   5  
D5F  C5   C6   SING  N  N   6  
D5F  C5   C9   DOUB  Y  N   7  
D5F  C1   C9   SING  Y  N   8  
D5F  C1   O1   SING  N  N   9  
D5F  C6   C7   DOUB  N  N  10  
D5F  C9   C8   SING  N  N  11  
D5F  C7   C10  SING  N  N  12  
D5F  C7   O3   SING  N  N  13  
D5F  C8   O3   SING  N  N  14  
D5F  C8   O4   DOUB  N  N  15  
D5F  C10  C11  SING  N  N  16  
D5F  C16  C12  SING  N  N  17  
D5F  C17  C12  SING  N  N  18  
D5F  C17  C11  SING  N  N  19  
D5F  C12  C13  SING  N  N  20  
D5F  C11  C15  SING  N  N  21  
D5F  C15  C14  SING  N  N  22  
D5F  C13  C14  SING  N  N  23  
D5F  C11  H1   SING  N  N  24  
D5F  C12  H2   SING  N  N  25  
D5F  C13  H3   SING  N  N  26  
D5F  C13  H4   SING  N  N  27  
D5F  C10  H5   SING  N  N  28  
D5F  C10  H6   SING  N  N  29  
D5F  C2   H7   SING  N  N  30  
D5F  C4   H8   SING  N  N  31  
D5F  C6   H9   SING  N  N  32  
D5F  C14  H10  SING  N  N  33  
D5F  C14  H11  SING  N  N  34  
D5F  C15  H12  SING  N  N  35  
D5F  C15  H13  SING  N  N  36  
D5F  C16  H14  SING  N  N  37  
D5F  C16  H15  SING  N  N  38  
D5F  C16  H16  SING  N  N  39  
D5F  C17  H17  SING  N  N  40  
D5F  C17  H18  SING  N  N  41  
D5F  O1   H19  SING  N  N  42  
D5F  O2   H20  SING  N  N  43  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
D5F  InChI             InChI                 1.03   "InChI=1S/C17H20O4/c1-10-3-2-4-11(5-10)6-14-8-12-7-13(18)9-15(19)16(12)17(20)21-14/h7-11,18-19H,2-6H2,1H3/t10-,11-/m0/s1"  
D5F  InChIKey          InChI                 1.03   JSPLICPLSKXJBM-QWRGUYRKSA-N  
D5F  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1CCC[C@@H](C1)CC2=Cc3cc(O)cc(O)c3C(=O)O2"  
D5F  SMILES            CACTVS                3.385  "C[CH]1CCC[CH](C1)CC2=Cc3cc(O)cc(O)c3C(=O)O2"  
D5F  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@H]1CCC[C@@H](C1)CC2=Cc3cc(cc(c3C(=O)O2)O)O"  
D5F  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1CCCC(C1)CC2=Cc3cc(cc(c3C(=O)O2)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          D5F
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "3-[[(1~{S},3~{S})-3-methylcyclohexyl]methyl]-6,8-bis(oxidanyl)isochromen-1-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
D5F  "Create component"  2019-07-03  PDBJ  
D5F  "Initial release"   2020-04-08  RCSB  
##
