data_AIF
# 
_chem_comp.id                                    AIF 
_chem_comp.name                                  "[(2R,3S,4R,5E)-5-[(5-amino-2,6-dioxo-3H-pyrimidin-4-yl)imino]-2,3,4-trihydroxy-pentyl] dihydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H15 N4 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-10-22 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        354.211 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     AIF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3EX8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
AIF C4     C4   C 0 1 N N N 44.643 51.740 74.872 5.934  0.239  -0.729 C4   AIF 1  
AIF C5     C5   C 0 1 N N N 43.897 52.904 74.820 4.709  0.899  -0.465 C5   AIF 2  
AIF C6     C6   C 0 1 N N N 44.503 54.112 75.150 3.686  0.188  0.128  C6   AIF 3  
AIF N1     N1   N 0 1 N N N 45.850 54.186 75.510 3.888  -1.143 0.446  N1   AIF 4  
AIF N3     N3   N 0 1 N N N 45.993 51.775 75.241 6.074  -1.059 -0.398 N3   AIF 5  
AIF N5     N5   N 0 1 N N N 42.597 52.841 74.516 4.539  2.251  -0.801 N5   AIF 6  
AIF O2     O2   O 0 1 N N N 47.749 53.027 75.959 5.222  -2.907 0.469  O2   AIF 7  
AIF O4     O4   O 0 1 N N N 44.116 50.651 74.611 6.853  0.840  -1.257 O4   AIF 8  
AIF O1P    O1P  O 0 1 N N N 45.213 56.787 82.720 -7.051 0.800  -0.542 O1P  AIF 9  
AIF P      P    P 0 1 N N N 44.347 58.069 82.277 -5.874 -0.298 -0.560 P    AIF 10 
AIF O3P    O3P  O 0 1 N N N 45.018 59.320 83.041 -6.307 -1.565 0.335  O3P  AIF 11 
AIF O2P    O2P  O 0 1 N N N 42.917 57.926 82.630 -5.631 -0.738 -1.953 O2P  AIF 12 
AIF "O5'"  O5*  O 0 1 N N N 44.556 58.233 80.684 -4.527 0.348  0.040  O5*  AIF 13 
AIF "C5'"  C5*  C 0 1 N N N 43.539 57.845 79.750 -3.276 -0.341 0.063  C5*  AIF 14 
AIF "C4'"  C4*  C 0 1 N N R 44.011 57.989 78.299 -2.211 0.555  0.698  C4*  AIF 15 
AIF "O4'"  O4*  O 0 1 N N N 45.154 57.150 78.108 -2.539 0.787  2.069  O4*  AIF 16 
AIF "C3'"  C3*  C 0 1 N N S 42.915 57.666 77.272 -0.847 -0.132 0.609  C3*  AIF 17 
AIF "O3'"  O3*  O 0 1 N N N 41.921 58.696 77.267 -0.518 -0.364 -0.762 O3*  AIF 18 
AIF "C2'"  C2*  C 0 1 N N R 43.464 57.585 75.844 0.218  0.764  1.244  C2*  AIF 19 
AIF "O2'"  O2*  O 0 1 N N N 42.398 57.476 74.899 0.188  2.052  0.626  O2*  AIF 20 
AIF "C1'"  C1*  C 0 1 N N N 44.349 56.348 75.652 1.578  0.145  1.049  C1*  AIF 21 
AIF "N1'"  N1*  N 0 1 N N N 43.772 55.217 75.313 2.495  0.788  0.398  N1*  AIF 22 
AIF C2     C2   C 0 1 N N N 46.599 53.000 75.561 5.066  -1.736 0.180  C2   AIF 23 
AIF HN1    HN1  H 0 1 N N N 46.272 55.066 75.727 3.175  -1.653 0.864  HN1  AIF 24 
AIF HN3    HN3  H 0 1 N N N 46.525 50.929 75.277 6.912  -1.512 -0.579 HN3  AIF 25 
AIF HN5    HN5  H 0 1 N N N 42.058 52.825 75.358 5.286  2.762  -1.150 HN5  AIF 26 
AIF HN5A   HN5A H 0 0 N N N 42.343 53.641 73.972 3.675  2.675  -0.684 HN5A AIF 27 
AIF HO1P   HO1P H 0 0 N N N 45.384 56.242 81.961 -7.894 0.479  -0.890 HO1P AIF 28 
AIF HO3P   HO3P H 0 0 N N N 45.150 59.099 83.956 -6.482 -1.350 1.261  HO3P AIF 29 
AIF "H5'"  H5*  H 0 1 N N N 43.277 56.792 79.932 -3.375 -1.257 0.646  H5*  AIF 30 
AIF "H5'A" H5*A H 0 0 N N N 42.671 58.505 79.895 -2.980 -0.591 -0.956 H5*A AIF 31 
AIF "H4'"  H4*  H 0 1 N N N 44.274 59.043 78.128 -2.174 1.507  0.167  H4*  AIF 32 
AIF "HO4'" HO4* H 0 0 N N N 45.260 56.964 77.182 -2.590 -0.018 2.603  HO4* AIF 33 
AIF "H3'"  H3*  H 0 1 N N N 42.496 56.693 77.568 -0.884 -1.084 1.140  H3*  AIF 34 
AIF "HO3'" HO3* H 0 0 N N N 41.701 58.929 78.161 -0.467 0.441  -1.296 HO3* AIF 35 
AIF "H2'"  H2*  H 0 1 N N N 44.047 58.504 75.683 0.016  0.869  2.310  H2*  AIF 36 
AIF "HO2'" HO2* H 0 0 N N N 41.567 57.452 75.359 0.359  2.035  -0.326 HO2* AIF 37 
AIF "H1'"  H1*  H 0 1 N N N 45.418 56.405 75.792 1.788  -0.835 1.451  H1*  AIF 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
AIF C4    C5     SING N N 1  
AIF C4    N3     SING N N 2  
AIF C4    O4     DOUB N N 3  
AIF C5    C6     DOUB N N 4  
AIF C5    N5     SING N N 5  
AIF C6    N1     SING N N 6  
AIF C6    "N1'"  SING N N 7  
AIF N1    C2     SING N N 8  
AIF N3    C2     SING N N 9  
AIF O2    C2     DOUB N N 10 
AIF O1P   P      SING N N 11 
AIF P     O3P    SING N N 12 
AIF P     O2P    DOUB N N 13 
AIF P     "O5'"  SING N N 14 
AIF "O5'" "C5'"  SING N N 15 
AIF "C5'" "C4'"  SING N N 16 
AIF "C4'" "O4'"  SING N N 17 
AIF "C4'" "C3'"  SING N N 18 
AIF "C3'" "O3'"  SING N N 19 
AIF "C3'" "C2'"  SING N N 20 
AIF "C2'" "O2'"  SING N N 21 
AIF "C2'" "C1'"  SING N N 22 
AIF "C1'" "N1'"  DOUB N N 23 
AIF N1    HN1    SING N N 24 
AIF N3    HN3    SING N N 25 
AIF N5    HN5    SING N N 26 
AIF N5    HN5A   SING N N 27 
AIF O1P   HO1P   SING N N 28 
AIF O3P   HO3P   SING N N 29 
AIF "C5'" "H5'"  SING N N 30 
AIF "C5'" "H5'A" SING N N 31 
AIF "C4'" "H4'"  SING N N 32 
AIF "O4'" "HO4'" SING N N 33 
AIF "C3'" "H3'"  SING N N 34 
AIF "O3'" "HO3'" SING N N 35 
AIF "C2'" "H2'"  SING N N 36 
AIF "O2'" "HO2'" SING N N 37 
AIF "C1'" "H1'"  SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
AIF SMILES           ACDLabs              10.04 "O=C1NC(/N=C/C(O)C(O)C(O)COP(=O)(O)O)=C(C(=O)N1)N"                                                                                                               
AIF SMILES_CANONICAL CACTVS               3.341 "NC1=C(NC(=O)NC1=O)N=C[C@@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O"                                                                                                    
AIF SMILES           CACTVS               3.341 "NC1=C(NC(=O)NC1=O)N=C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O"                                                                                                        
AIF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@H]([C@H]([C@@H](\C=N\C1=C(C(=O)NC(=O)N1)N)O)O)O)OP(=O)(O)O"                                                                                                
AIF SMILES           "OpenEye OEToolkits" 1.5.0 "C(C(C(C(C=NC1=C(C(=O)NC(=O)N1)N)O)O)O)OP(=O)(O)O"                                                                                                               
AIF InChI            InChI                1.03  "InChI=1S/C9H15N4O9P/c10-5-7(12-9(18)13-8(5)17)11-1-3(14)6(16)4(15)2-22-23(19,20)21/h1,3-4,6,14-16H,2,10H2,(H2,19,20,21)(H2,12,13,17,18)/b11-1+/t3-,4-,6+/m1/s1" 
AIF InChIKey         InChI                1.03  XKTZRTIKRCUGRX-QNGFKNCYSA-N                                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
AIF "SYSTEMATIC NAME" ACDLabs              10.04 "(2R,3S,4R,5E)-5-[(5-amino-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)imino]-2,3,4-trihydroxypentyl dihydrogen phosphate (non-preferred name)" 
AIF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5E)-5-[(5-amino-2,6-dioxo-3H-pyrimidin-4-yl)imino]-2,3,4-trihydroxy-pentyl] dihydrogen phosphate"                                  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
AIF "Create component"  2008-10-22 PDBJ 
AIF "Modify descriptor" 2011-06-04 RCSB 
# 
