data_7YF
# 
_chem_comp.id                                    7YF 
_chem_comp.name                                  "(2R)-N-[2-[[(2S)-5-carbamimidamido-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-5-oxidanylidene-1,2-dihydropyrrole-2-carboxamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H20 N6 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-02-14 
_chem_comp.pdbx_modified_date                    2018-07-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        324.336 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5WXS 
_chem_comp.pdbx_subcomponent_list                "7YL GLY RGL" 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7YF C5  C9  C 0 1 N N N 4.473  -31.833 -26.820 -3.352 0.811  0.105  C    7YL 1  
7YF O2  O3  O 0 1 N N N 3.766  -32.767 -26.571 -3.274 1.417  1.153  O    7YL 2  
7YF C4  C10 C 0 1 N N R 4.956  -31.651 -28.209 -4.600 0.914  -0.734 CA   7YL 3  
7YF N1  N6  N 0 1 N N N 3.901  -31.278 -29.115 -5.586 1.778  -0.072 N    7YL 4  
7YF C3  C11 C 0 1 N N N 5.345  -33.010 -28.752 -5.256 -0.442 -0.860 CB   7YL 5  
7YF C2  C12 C 0 1 N N N 4.491  -33.337 -29.953 -6.469 -0.338 -0.327 CG   7YL 6  
7YF C1  C13 C 0 1 N N N 3.565  -32.194 -29.978 -6.681 1.031  0.163  CD   7YL 7  
7YF O1  O4  O 0 1 N N N 2.613  -32.172 -30.711 -7.695 1.429  0.702  OE   7YL 8  
7YF N2  N5  N 0 1 N N N 4.848  -30.960 -25.912 -2.320 0.050  -0.312 N    GLY 9  
7YF C6  C8  C 0 1 N N N 4.444  -30.992 -24.534 -1.105 -0.045 0.501  CA   GLY 10 
7YF C7  C7  C 0 1 N N N 2.948  -30.878 -24.499 -0.113 -0.950 -0.183 C    GLY 11 
7YF O3  O2  O 0 1 N N N 2.379  -30.270 -25.354 -0.394 -1.466 -1.244 O    GLY 12 
7YF N3  N4  N 0 1 N N N 2.308  -31.463 -23.525 1.086  -1.188 0.385  N    RGL 13 
7YF C8  C4  C 0 1 N N S 0.868  -31.404 -23.423 2.050  -2.068 -0.279 CA   RGL 14 
7YF C9  C3  C 0 1 N N N 0.343  -30.447 -22.458 1.756  -3.500 0.084  C    RGL 15 
7YF O4  O1  O 0 1 N N N 0.642  -29.283 -22.518 0.836  -3.759 0.823  O    RGL 16 
7YF C10 C1  C 0 1 N N N 0.435  -32.815 -23.084 3.466  -1.707 0.173  CB   RGL 17 
7YF C11 C5  C 0 1 N N N 0.230  -33.643 -24.323 3.810  -0.295 -0.305 CG   RGL 18 
7YF C12 C2  C 0 1 N N N 0.114  -35.110 -24.009 5.227  0.066  0.147  CD   RGL 19 
7YF N4  N1  N 0 1 N N N 0.154  -35.858 -25.237 5.556  1.417  -0.311 NE   RGL 20 
7YF C13 C6  C 0 1 N N N -0.152 -37.127 -25.337 6.785  1.961  -0.021 CZ   RGL 21 
7YF N6  N2  N 0 1 N N N -0.463 -37.806 -24.276 7.095  3.230  -0.451 NH1  RGL 22 
7YF N5  N3  N 0 1 N N N -0.159 -37.674 -26.446 7.657  1.274  0.662  NH2  RGL 23 
7YF H17 H17 H 0 1 N N N 5.805  -30.952 -28.252 -4.357 1.308  -1.721 HA   7YL 24 
7YF H18 H18 H 0 1 N N N 3.459  -30.382 -29.084 -5.469 2.714  0.155  H    7YL 25 
7YF H19 H19 H 0 1 N N N 6.115  -33.647 -28.343 -4.821 -1.327 -1.301 HB   7YL 26 
7YF H20 H20 H 0 1 N N N 4.545  -34.186 -30.618 -7.190 -1.140 -0.263 HG   7YL 27 
7YF H16 H16 H 0 1 N N N 5.457  -30.222 -26.201 -2.383 -0.435 -1.150 H    GLY 28 
7YF H14 H14 H 0 1 N N N 4.759  -31.939 -24.072 -0.669 0.947  0.620  HA2  GLY 29 
7YF H15 H15 H 0 1 N N N 4.897  -30.150 -23.990 -1.354 -0.452 1.480  HA3  GLY 30 
7YF H5  H5  H 0 1 N N N -0.323 -30.787 -21.679 2.368  -4.295 -0.315 HX   RGL 31 
7YF H13 H13 H 0 1 N N N 2.826  -31.964 -22.832 1.310  -0.775 1.234  HN1  RGL 32 
7YF H6  H6  H 0 1 N N N 0.457  -31.158 -24.413 1.971  -1.944 -1.359 HA   RGL 33 
7YF H1  H1  H 0 1 N N N -0.510 -32.773 -22.522 3.521  -1.745 1.261  HB1  RGL 34 
7YF H2  H2  H 0 1 N N N 1.211  -33.287 -22.463 4.175  -2.418 -0.251 HB2  RGL 35 
7YF H7  H7  H 0 1 N N N 1.086  -33.491 -24.997 3.756  -0.257 -1.393 HG1  RGL 36 
7YF H8  H8  H 0 1 N N N -0.693 -33.313 -24.822 3.101  0.415  0.119  HG2  RGL 37 
7YF H3  H3  H 0 1 N N N -0.837 -35.302 -23.491 5.281  0.027  1.235  HD1  RGL 38 
7YF H4  H4  H 0 1 N N N 0.951  -35.416 -23.364 5.936  -0.645 -0.277 HD2  RGL 39 
7YF H9  H9  H 0 1 N N N 0.434  -35.378 -26.068 4.907  1.929  -0.819 HE   RGL 40 
7YF H10 H10 H 0 1 N N N -0.469 -37.360 -23.381 6.446  3.741  -0.959 HH11 RGL 41 
7YF H11 H11 H 0 1 N N N -0.697 -38.775 -24.353 7.962  3.613  -0.246 HH12 RGL 42 
7YF H12 H12 H 0 1 N N N -0.421 -38.637 -26.387 8.524  1.657  0.867  HH21 RGL 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7YF O1  C1  DOUB N N 1  
7YF C1  C2  SING N N 2  
7YF C1  N1  SING N N 3  
7YF C2  C3  DOUB N N 4  
7YF N1  C4  SING N N 5  
7YF C3  C4  SING N N 6  
7YF C4  C5  SING N N 7  
7YF C5  O2  DOUB N N 8  
7YF C5  N2  SING N N 9  
7YF N5  C13 DOUB N N 10 
7YF N2  C6  SING N N 11 
7YF O3  C7  DOUB N N 12 
7YF C13 N4  SING N N 13 
7YF C13 N6  SING N N 14 
7YF N4  C12 SING N N 15 
7YF C6  C7  SING N N 16 
7YF C7  N3  SING N N 17 
7YF C11 C12 SING N N 18 
7YF C11 C10 SING N N 19 
7YF N3  C8  SING N N 20 
7YF C8  C10 SING N N 21 
7YF C8  C9  SING N N 22 
7YF O4  C9  DOUB N N 23 
7YF C10 H1  SING N N 24 
7YF C10 H2  SING N N 25 
7YF C12 H3  SING N N 26 
7YF C12 H4  SING N N 27 
7YF C9  H5  SING N N 28 
7YF C8  H6  SING N N 29 
7YF C11 H7  SING N N 30 
7YF C11 H8  SING N N 31 
7YF N4  H9  SING N N 32 
7YF N6  H10 SING N N 33 
7YF N6  H11 SING N N 34 
7YF N5  H12 SING N N 35 
7YF N3  H13 SING N N 36 
7YF C6  H14 SING N N 37 
7YF C6  H15 SING N N 38 
7YF N2  H16 SING N N 39 
7YF C4  H17 SING N N 40 
7YF N1  H18 SING N N 41 
7YF C3  H19 SING N N 42 
7YF C2  H20 SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7YF InChI            InChI                1.03  "InChI=1S/C13H20N6O4/c14-13(15)16-5-1-2-8(7-20)18-11(22)6-17-12(23)9-3-4-10(21)19-9/h3-4,7-9H,1-2,5-6H2,(H,17,23)(H,18,22)(H,19,21)(H4,14,15,16)/t8-,9+/m0/s1" 
7YF InChIKey         InChI                1.03  WUOPPCVXHFRAOP-DTWKUNHWSA-N                                                                                                                                    
7YF SMILES_CANONICAL CACTVS               3.385 "NC(=N)NCCC[C@H](NC(=O)CNC(=O)[C@@H]1NC(=O)C=C1)C=O"                                                                                                           
7YF SMILES           CACTVS               3.385 "NC(=N)NCCC[CH](NC(=O)CNC(=O)[CH]1NC(=O)C=C1)C=O"                                                                                                              
7YF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "[H]/N=C(/N)\NCCC[C@@H](C=O)NC(=O)CNC(=O)[C@H]1C=CC(=O)N1"                                                                                                     
7YF SMILES           "OpenEye OEToolkits" 2.0.6 "C1=CC(=O)NC1C(=O)NCC(=O)NC(CCCNC(=N)N)C=O"                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7YF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-~{N}-[2-[[(2~{S})-5-carbamimidamido-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-5-oxidanylidene-1,2-dihydropyrrole-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7YF "Create component" 2017-02-14 PDBJ 
7YF "Initial release"  2018-07-11 RCSB 
# 
