data_0JF
# 
_chem_comp.id                                    0JF 
_chem_comp.name                                  "(3S)-N-(4-methylbenzyl)-1-{2-[(3,4,5-trimethoxyphenyl)amino]pyrimidin-4-yl}piperidine-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H33 N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-01-23 
_chem_comp.pdbx_modified_date                    2012-02-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        491.582 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0JF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4DCE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0JF C24 C24 C 0 1 N N N 5.778  20.063 37.419 -6.211  -3.014 0.311  C24 0JF 1  
0JF O2  O2  O 0 1 N N N 6.792  20.278 36.424 -7.029  -1.845 0.397  O2  0JF 2  
0JF C5  C5  C 0 1 Y N N 8.091  19.997 36.793 -6.419  -0.647 0.192  C5  0JF 3  
0JF C6  C6  C 0 1 Y N N 8.403  19.141 37.867 -5.061  -0.600 -0.085 C6  0JF 4  
0JF C4  C4  C 0 1 Y N N 9.129  20.587 36.058 -7.156  0.529  0.255  C4  0JF 5  
0JF O3  O3  O 0 1 N N N 8.837  21.413 35.005 -8.491  0.482  0.523  O3  0JF 6  
0JF C25 C25 C 0 1 N N N 8.952  22.819 35.316 -9.373  0.373  -0.596 C25 0JF 7  
0JF C3  C3  C 0 1 Y N N 10.460 20.315 36.388 -6.531  1.752  0.046  C3  0JF 8  
0JF O4  O4  O 0 1 N N N 11.479 20.884 35.678 -7.252  2.904  0.109  O4  0JF 9  
0JF C26 C26 C 0 1 N N N 12.286 19.924 35.005 -6.545  4.125  -0.117 C26 0JF 10 
0JF C2  C2  C 0 1 Y N N 10.750 19.477 37.463 -5.173  1.799  -0.225 C2  0JF 11 
0JF C1  C1  C 0 1 Y N N 9.737  18.885 38.211 -4.438  0.623  -0.294 C1  0JF 12 
0JF N5  N5  N 0 1 N N N 10.126 18.074 39.217 -3.066  0.670  -0.573 N5  0JF 13 
0JF C16 C16 C 0 1 Y N N 9.518  17.852 40.388 -2.212  -0.262 -0.007 C16 0JF 14 
0JF N2  N2  N 0 1 Y N N 8.364  18.455 40.698 -0.938  -0.272 -0.368 N2  0JF 15 
0JF N1  N1  N 0 1 Y N N 10.082 16.997 41.268 -2.689  -1.117 0.886  N1  0JF 16 
0JF C15 C15 C 0 1 Y N N 9.519  16.726 42.439 -1.902  -2.022 1.449  C15 0JF 17 
0JF C14 C14 C 0 1 Y N N 8.326  17.346 42.786 -0.567  -2.071 1.097  C14 0JF 18 
0JF C13 C13 C 0 1 Y N N 7.761  18.235 41.874 -0.093  -1.153 0.157  C13 0JF 19 
0JF N3  N3  N 0 1 N N N 6.555  18.874 42.153 1.240   -1.161 -0.222 N3  0JF 20 
0JF C19 C19 C 0 1 N N N 5.899  18.689 43.456 1.511   -0.114 -1.216 C19 0JF 21 
0JF C18 C18 C 0 1 N N N 5.829  19.684 41.144 1.636   -2.484 -0.723 C18 0JF 22 
0JF C17 C17 C 0 1 N N N 4.505  18.945 40.847 3.142   -2.497 -0.994 C17 0JF 23 
0JF C21 C21 C 0 1 N N N 3.767  18.509 42.133 3.480   -1.418 -2.027 C21 0JF 24 
0JF C20 C20 C 0 1 N N S 4.680  17.811 43.163 3.013   -0.057 -1.502 C20 0JF 25 
0JF C22 C22 C 0 1 N N N 3.955  17.569 44.473 3.755   0.274  -0.232 C22 0JF 26 
0JF O1  O1  O 0 1 N N N 3.533  18.518 45.135 3.142   0.450  0.799  O1  0JF 27 
0JF N4  N4  N 0 1 N N N 3.851  16.284 44.822 5.099   0.373  -0.243 N4  0JF 28 
0JF C23 C23 C 0 1 N N N 3.194  15.862 46.070 5.820   0.695  0.991  C23 0JF 29 
0JF C7  C7  C 0 1 Y N N 3.001  14.355 46.019 7.299   0.746  0.709  C7  0JF 30 
0JF C8  C8  C 0 1 Y N N 1.709  13.835 45.945 8.066   -0.398 0.827  C8  0JF 31 
0JF C9  C9  C 0 1 Y N N 1.525  12.452 45.888 9.422   -0.352 0.564  C9  0JF 32 
0JF C10 C10 C 0 1 Y N N 2.629  11.606 45.906 10.012  0.838  0.182  C10 0JF 33 
0JF C27 C27 C 0 1 N N N 2.425  10.093 45.845 11.490  0.888  -0.105 C27 0JF 34 
0JF C11 C11 C 0 1 Y N N 3.914  12.135 45.983 9.246   1.982  0.063  C11 0JF 35 
0JF C12 C12 C 0 1 Y N N 4.106  13.513 46.040 7.890   1.937  0.327  C12 0JF 36 
0JF H1  H1  H 0 1 N N N 4.794  20.322 37.002 -5.418  -2.958 1.057  H1  0JF 37 
0JF H2  H2  H 0 1 N N N 5.780  19.006 37.722 -6.821  -3.898 0.494  H2  0JF 38 
0JF H3  H3  H 0 1 N N N 5.984  20.696 38.295 -5.770  -3.076 -0.684 H3  0JF 39 
0JF H4  H4  H 0 1 N N N 7.607  18.678 38.431 -4.489  -1.514 -0.139 H4  0JF 40 
0JF H5  H5  H 0 1 N N N 8.703  23.414 34.425 -9.236  1.232  -1.252 H5  0JF 41 
0JF H6  H6  H 0 1 N N N 8.258  23.072 36.131 -9.152  -0.542 -1.145 H6  0JF 42 
0JF H7  H7  H 0 1 N N N 9.983  23.042 35.629 -10.404 0.346  -0.244 H7  0JF 43 
0JF H8  H8  H 0 1 N N N 13.086 20.439 34.453 -5.757  4.232  0.629  H8  0JF 44 
0JF H9  H9  H 0 1 N N N 12.731 19.239 35.741 -6.102  4.110  -1.113 H9  0JF 45 
0JF H10 H10 H 0 1 N N N 11.664 19.352 34.301 -7.236  4.964  -0.039 H10 0JF 46 
0JF H11 H11 H 0 1 N N N 11.781 19.283 37.721 -4.687  2.749  -0.388 H11 0JF 47 
0JF H12 H12 H 0 1 N N N 10.979 17.574 39.068 -2.715  1.356  -1.162 H12 0JF 48 
0JF H13 H13 H 0 1 N N N 9.986  16.028 43.118 -2.300  -2.715 2.176  H13 0JF 49 
0JF H14 H14 H 0 1 N N N 7.850  17.145 43.735 0.095   -2.799 1.541  H14 0JF 50 
0JF H15 H15 H 0 1 N N N 6.576  18.187 44.162 0.974   -0.340 -2.137 H15 0JF 51 
0JF H16 H16 H 0 1 N N N 5.587  19.658 43.873 1.178   0.849  -0.828 H16 0JF 52 
0JF H17 H17 H 0 1 N N N 6.428  19.771 40.226 1.395   -3.242 0.022  H17 0JF 53 
0JF H18 H18 H 0 1 N N N 5.621  20.688 41.543 1.099   -2.698 -1.647 H18 0JF 54 
0JF H19 H19 H 0 1 N N N 3.848  19.616 40.274 3.681   -2.296 -0.068 H19 0JF 55 
0JF H20 H20 H 0 1 N N N 4.728  18.050 40.248 3.434   -3.474 -1.381 H20 0JF 56 
0JF H21 H21 H 0 1 N N N 3.331  19.403 42.604 4.557   -1.395 -2.191 H21 0JF 57 
0JF H22 H22 H 0 1 N N N 2.963  17.813 41.853 2.972   -1.640 -2.965 H22 0JF 58 
0JF H23 H23 H 0 1 N N N 5.018  16.849 42.750 3.212   0.709  -2.250 H23 0JF 59 
0JF H24 H24 H 0 1 N N N 4.232  15.586 44.216 5.589   0.232  -1.069 H24 0JF 60 
0JF H25 H25 H 0 1 N N N 3.825  16.128 46.931 5.487   1.663  1.364  H25 0JF 61 
0JF H26 H26 H 0 1 N N N 2.217  16.360 46.163 5.619   -0.072 1.739  H26 0JF 62 
0JF H27 H27 H 0 1 N N N 0.856  14.498 45.932 7.604   -1.328 1.125  H27 0JF 63 
0JF H28 H28 H 0 1 N N N 0.528  12.040 45.830 10.021  -1.247 0.656  H28 0JF 64 
0JF H29 H29 H 0 1 N N N 2.422  9.765  44.795 11.663  0.675  -1.160 H29 0JF 65 
0JF H30 H30 H 0 1 N N N 3.242  9.591  46.383 11.873  1.880  0.133  H30 0JF 66 
0JF H31 H31 H 0 1 N N N 1.464  9.834  46.313 12.004  0.145  0.505  H31 0JF 67 
0JF H32 H32 H 0 1 N N N 4.767  11.473 45.999 9.707   2.912  -0.235 H32 0JF 68 
0JF H33 H33 H 0 1 N N N 5.103  13.923 46.100 7.290   2.830  0.231  H33 0JF 69 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0JF C26 O4  SING N N 1  
0JF O3  C25 SING N N 2  
0JF O3  C4  SING N N 3  
0JF O4  C3  SING N N 4  
0JF C4  C3  DOUB Y N 5  
0JF C4  C5  SING Y N 6  
0JF C3  C2  SING Y N 7  
0JF O2  C5  SING N N 8  
0JF O2  C24 SING N N 9  
0JF C5  C6  DOUB Y N 10 
0JF C2  C1  DOUB Y N 11 
0JF C6  C1  SING Y N 12 
0JF C1  N5  SING N N 13 
0JF N5  C16 SING N N 14 
0JF C16 N2  DOUB Y N 15 
0JF C16 N1  SING Y N 16 
0JF N2  C13 SING Y N 17 
0JF C17 C18 SING N N 18 
0JF C17 C21 SING N N 19 
0JF C18 N3  SING N N 20 
0JF N1  C15 DOUB Y N 21 
0JF C13 N3  SING N N 22 
0JF C13 C14 DOUB Y N 23 
0JF C21 C20 SING N N 24 
0JF N3  C19 SING N N 25 
0JF C15 C14 SING Y N 26 
0JF C20 C19 SING N N 27 
0JF C20 C22 SING N N 28 
0JF C22 N4  SING N N 29 
0JF C22 O1  DOUB N N 30 
0JF N4  C23 SING N N 31 
0JF C27 C10 SING N N 32 
0JF C9  C10 DOUB Y N 33 
0JF C9  C8  SING Y N 34 
0JF C10 C11 SING Y N 35 
0JF C8  C7  DOUB Y N 36 
0JF C11 C12 DOUB Y N 37 
0JF C7  C12 SING Y N 38 
0JF C7  C23 SING N N 39 
0JF C24 H1  SING N N 40 
0JF C24 H2  SING N N 41 
0JF C24 H3  SING N N 42 
0JF C6  H4  SING N N 43 
0JF C25 H5  SING N N 44 
0JF C25 H6  SING N N 45 
0JF C25 H7  SING N N 46 
0JF C26 H8  SING N N 47 
0JF C26 H9  SING N N 48 
0JF C26 H10 SING N N 49 
0JF C2  H11 SING N N 50 
0JF N5  H12 SING N N 51 
0JF C15 H13 SING N N 52 
0JF C14 H14 SING N N 53 
0JF C19 H15 SING N N 54 
0JF C19 H16 SING N N 55 
0JF C18 H17 SING N N 56 
0JF C18 H18 SING N N 57 
0JF C17 H19 SING N N 58 
0JF C17 H20 SING N N 59 
0JF C21 H21 SING N N 60 
0JF C21 H22 SING N N 61 
0JF C20 H23 SING N N 62 
0JF N4  H24 SING N N 63 
0JF C23 H25 SING N N 64 
0JF C23 H26 SING N N 65 
0JF C8  H27 SING N N 66 
0JF C9  H28 SING N N 67 
0JF C27 H29 SING N N 68 
0JF C27 H30 SING N N 69 
0JF C27 H31 SING N N 70 
0JF C11 H32 SING N N 71 
0JF C12 H33 SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0JF SMILES           ACDLabs              12.01 "O=C(NCc1ccc(cc1)C)C4CCCN(c2nc(ncc2)Nc3cc(OC)c(OC)c(OC)c3)C4"                                                                                                                                               
0JF InChI            InChI                1.03  "InChI=1S/C27H33N5O4/c1-18-7-9-19(10-8-18)16-29-26(33)20-6-5-13-32(17-20)24-11-12-28-27(31-24)30-21-14-22(34-2)25(36-4)23(15-21)35-3/h7-12,14-15,20H,5-6,13,16-17H2,1-4H3,(H,29,33)(H,28,30,31)/t20-/m0/s1" 
0JF InChIKey         InChI                1.03  BAQAWVMHTOQJCI-FQEVSTJZSA-N                                                                                                                                                                                 
0JF SMILES_CANONICAL CACTVS               3.370 "COc1cc(Nc2nccc(n2)N3CCC[C@@H](C3)C(=O)NCc4ccc(C)cc4)cc(OC)c1OC"                                                                                                                                            
0JF SMILES           CACTVS               3.370 "COc1cc(Nc2nccc(n2)N3CCC[CH](C3)C(=O)NCc4ccc(C)cc4)cc(OC)c1OC"                                                                                                                                              
0JF SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1ccc(cc1)CNC(=O)[C@H]2CCCN(C2)c3ccnc(n3)Nc4cc(c(c(c4)OC)OC)OC"                                                                                                                                           
0JF SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1ccc(cc1)CNC(=O)C2CCCN(C2)c3ccnc(n3)Nc4cc(c(c(c4)OC)OC)OC"                                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0JF "SYSTEMATIC NAME" ACDLabs              12.01 "(3S)-N-(4-methylbenzyl)-1-{2-[(3,4,5-trimethoxyphenyl)amino]pyrimidin-4-yl}piperidine-3-carboxamide"         
0JF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3S)-N-[(4-methylphenyl)methyl]-1-[2-[(3,4,5-trimethoxyphenyl)amino]pyrimidin-4-yl]piperidine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0JF "Create component" 2012-01-23 RCSB 
# 
