data_P4E
# 
_chem_comp.id                                    P4E 
_chem_comp.name                                  "(2S,4E)-2-amino-5-phenylpent-4-enoic acid" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C11 H13 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-10-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        191.226 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     P4E 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3U51 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
P4E C01  C01  C 0 1 Y N N N N N 0.143  49.946 -25.105 4.851  0.363  0.347  C01  P4E 1  
P4E C02  C02  C 0 1 Y N N N N N -0.054 50.383 -23.785 4.530  -0.894 -0.132 C02  P4E 2  
P4E C03  C03  C 0 1 Y N N N N N -0.811 51.536 -23.529 3.223  -1.202 -0.450 C03  P4E 3  
P4E C04  C04  C 0 1 Y N N N N N -1.369 52.255 -24.595 2.224  -0.242 -0.286 C04  P4E 4  
P4E C05  C05  C 0 1 Y N N N N N -1.172 51.817 -25.912 2.554  1.025  0.199  C05  P4E 5  
P4E C06  C06  C 0 1 Y N N N N N -0.415 50.659 -26.164 3.864  1.318  0.518  C06  P4E 6  
P4E C07  C07  C 0 1 N N N N N N -2.189 53.505 -24.327 0.822  -0.564 -0.625 C07  P4E 7  
P4E C08  C08  C 0 1 N N N N N N -3.581 53.433 -24.395 -0.125 0.350  -0.468 C08  P4E 8  
P4E C09  C09  C 0 1 N N N N N N -4.455 54.305 -23.493 -1.555 0.021  -0.814 C09  P4E 9  
P4E CA   C10  C 0 1 N N S Y N N -5.640 53.440 -23.061 -2.448 0.296  0.397  C10  P4E 10 
P4E C    C11  C 0 1 N N N Y N Y -7.019 54.109 -23.134 -3.891 0.085  0.015  C11  P4E 11 
P4E O    O12  O 0 1 N N N Y N Y -7.702 53.959 -24.143 -4.449 -0.945 0.308  O12  P4E 12 
P4E N    N32  N 0 1 N N N Y Y N -5.648 52.262 -23.919 -2.092 -0.621 1.487  N32  P4E 13 
P4E H01  H01  H 0 1 N N N N N N 0.726  49.058 -25.299 5.875  0.599  0.595  H01  P4E 14 
P4E H02  H02  H 0 1 N N N N N N 0.379  49.830 -22.965 5.304  -1.636 -0.259 H02  P4E 15 
P4E H03  H03  H 0 1 N N N N N N -0.963 51.869 -22.513 2.974  -2.183 -0.825 H03  P4E 16 
P4E H05  H05  H 0 1 N N N N N N -1.602 52.370 -26.734 1.785  1.772  0.327  H05  P4E 17 
P4E H06  H06  H 0 1 N N N N N N -0.266 50.322 -27.179 4.121  2.297  0.893  H06  P4E 18 
P4E H109 H109 H 0 0 N N N N N N -3.885 54.641 -22.614 -1.878 0.639  -1.652 H109 P4E 19 
P4E H209 H209 H 0 0 N N N N N N -4.807 55.192 -24.041 -1.629 -1.031 -1.089 H209 P4E 20 
P4E HA   H10  H 0 1 N N N Y N N -5.490 53.216 -21.995 -2.307 1.326  0.726  H10  P4E 21 
P4E H    HN32 H 0 0 N N N Y Y N -6.413 51.670 -23.665 -2.623 -0.417 2.320  HN32 P4E 22 
P4E H107 H107 H 0 0 N N N N N N -1.701 54.438 -24.087 0.569  -1.545 -1.001 H107 P4E 23 
P4E H108 H108 H 0 0 N N N N N N -4.047 52.753 -25.093 0.128  1.331  -0.093 H108 P4E 24 
P4E OXT  OXT  O 0 1 N Y N Y N Y ?      ?      ?       -4.556 1.043  -0.651 OXT  P4E 25 
P4E HXT  HXT  H 0 1 N Y N Y N Y ?      ?      ?       -5.479 0.861  -0.874 HXT  P4E 26 
P4E H2   H2   H 0 1 N Y N Y Y N -5.748 52.545 -24.873 -2.214 -1.582 1.206  H2   P4E 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
P4E C01 C02  DOUB Y N 1  
P4E C01 H01  SING N N 2  
P4E C02 C03  SING Y N 3  
P4E C02 H02  SING N N 4  
P4E C03 H03  SING N N 5  
P4E C04 C07  SING N N 6  
P4E C04 C03  DOUB Y N 7  
P4E C05 C04  SING Y N 8  
P4E C05 H05  SING N N 9  
P4E C06 C05  DOUB Y N 10 
P4E C06 C01  SING Y N 11 
P4E C06 H06  SING N N 12 
P4E C08 C07  DOUB N E 13 
P4E C08 C09  SING N N 14 
P4E C09 CA   SING N N 15 
P4E C09 H109 SING N N 16 
P4E C09 H209 SING N N 17 
P4E CA  HA   SING N N 18 
P4E C   CA   SING N N 19 
P4E O   C    DOUB N N 20 
P4E N   CA   SING N N 21 
P4E N   H    SING N N 22 
P4E C07 H107 SING N N 23 
P4E C08 H108 SING N N 24 
P4E C   OXT  SING N N 25 
P4E OXT HXT  SING N N 26 
P4E N   H2   SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
P4E SMILES           ACDLabs              12.01 "O=C(O)C(N)C/C=C/c1ccccc1"                                                                          
P4E InChI            InChI                1.03  "InChI=1S/C11H13NO2/c12-10(11(13)14)8-4-7-9-5-2-1-3-6-9/h1-7,10H,8,12H2,(H,13,14)/b7-4+/t10-/m0/s1" 
P4E InChIKey         InChI                1.03  MCGSKGBMVBECNS-QBBOHKLWSA-N                                                                         
P4E SMILES_CANONICAL CACTVS               3.370 "N[C@@H](C\C=C\c1ccccc1)C(O)=O"                                                                     
P4E SMILES           CACTVS               3.370 "N[CH](CC=Cc1ccccc1)C(O)=O"                                                                         
P4E SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1ccc(cc1)C=CC[C@@H](C(=O)O)N"                                                                     
P4E SMILES           "OpenEye OEToolkits" 1.7.2 "c1ccc(cc1)C=CCC(C(=O)O)N"                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
P4E "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,4E)-2-amino-5-phenylpent-4-enoic acid" 
P4E "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-2-azanyl-5-phenyl-pent-4-enoic acid"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
P4E "Create component"   2011-10-13 RCSB 
P4E "Other modification" 2011-10-27 RCSB 
P4E "Modify backbone"    2023-11-03 PDBE 
P4E "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            P4E 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
