data_P2E
#

_chem_comp.id                                   P2E
_chem_comp.name                                 "(Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H32 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Prostaglandin E2"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-06-04
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       352.465
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    P2E
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3HLQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P2E  C2    C2    C  0  1  N  N  N  -13.702  11.238  41.955   3.931   3.042   0.032  C2    P2E   1  
P2E  C3    C3    C  0  1  N  N  N  -13.187  11.873  40.635   4.468   1.653  -0.323  C3    P2E   2  
P2E  C4    C4    C  0  1  N  N  N  -11.865  11.326  40.065   3.312   0.762  -0.782  C4    P2E   3  
P2E  C5    C5    C  0  1  N  N  N  -11.673  12.109  38.779   3.841  -0.606  -1.131  C5    P2E   4  
P2E  C6    C6    C  0  1  N  N  N  -11.648  11.658  37.521   3.299  -1.673  -0.599  C6    P2E   5  
P2E  C7    C7    C  0  1  N  N  N  -11.716  10.206  37.130   2.044  -1.549   0.227  C7    P2E   6  
P2E  C8    C8    C  0  1  N  N  R  -13.018   9.743  36.477   0.978  -2.500  -0.320  C8    P2E   7  
P2E  C9    C9    C  0  1  N  N  N  -14.261   9.840  37.304   1.410  -3.937  -0.111  C9    P2E   8  
P2E  O3    O3    O  0  1  N  N  N  -14.311   9.534  38.464   2.397  -4.461  -0.569  O3    P2E   9  
P2E  C12   C12   C  0  1  N  N  R  -13.396  10.604  35.293  -0.343  -2.313   0.455  C12   P2E  10  
P2E  C11   C11   C  0  1  N  N  R  -14.934  10.431  35.164  -0.909  -3.752   0.570  C11   P2E  11  
P2E  O4    O4    O  0  1  N  N  N  -15.594  11.482  34.443  -1.783  -3.865   1.695  O4    P2E  12  
P2E  C10   C10   C  0  1  N  N  N  -15.473  10.382  36.576   0.372  -4.596   0.780  C10   P2E  13  
P2E  C13   C13   C  0  1  N  N  N  -12.742  10.113  34.024  -1.290  -1.432  -0.317  C13   P2E  14  
P2E  C14   C14   C  0  1  N  N  N  -12.110  11.028  33.291  -1.713  -0.308   0.206  C14   P2E  15  
P2E  C15   C15   C  0  1  N  N  S  -11.503  10.637  31.965  -2.660   0.574  -0.566  C15   P2E  16  
P2E  O5    O5    O  0  1  N  N  N  -12.311  11.374  31.018  -3.037  -0.080  -1.779  O5    P2E  17  
P2E  C16   C16   C  0  1  N  N  N  -10.024  11.044  31.862  -3.908   0.844   0.277  C16   P2E  18  
P2E  C17   C17   C  0  1  N  N  N   -9.720  12.508  32.144  -4.812   1.838  -0.454  C17   P2E  19  
P2E  C18   C18   C  0  1  N  N  N   -8.489  13.013  31.383  -6.060   2.109   0.389  C18   P2E  20  
P2E  C19   C19   C  0  1  N  N  N   -7.169  12.736  32.118  -6.964   3.103  -0.342  C19   P2E  21  
P2E  C20   C20   C  0  1  N  N  N   -6.035  13.390  31.335  -8.212   3.373   0.501  C20   P2E  22  
P2E  O1    O1    O  0  1  N  N  N  -13.627   8.903  42.217   6.194   3.480   0.519  O1    P2E  23  
P2E  C1    C1    C  0  1  N  N  N  -14.297   9.852  41.785   5.069   3.919   0.484  C1    P2E  24  
P2E  O2    O2    O  0  1  N  N  N  -15.413   9.683  41.245   4.834   5.190   0.848  O2    P2E  25  
P2E  H2    H2    H  0  1  N  N  N  -12.851  11.159  42.648   3.458   3.483  -0.845  H2    P2E  26  
P2E  H2A   H2A   H  0  1  N  N  N  -14.507  11.888  42.330   3.199   2.954   0.834  H2A   P2E  27  
P2E  H3    H3    H  0  1  N  N  N  -13.961  11.703  39.872   5.200   1.741  -1.125  H3    P2E  28  
P2E  H3A   H3A   H  0  1  N  N  N  -12.984  12.926  40.880   4.941   1.212   0.554  H3A   P2E  29  
P2E  H4    H4    H  0  1  N  N  N  -11.030  11.488  40.762   2.580   0.674   0.020  H4    P2E  30  
P2E  H4A   H4A   H  0  1  N  N  N  -11.894  10.239  39.898   2.839   1.203  -1.659  H4A   P2E  31  
P2E  H5    H5    H  0  1  N  N  N  -11.538  13.174  38.896   4.666  -0.706  -1.821  H5    P2E  32  
P2E  H6    H6    H  0  1  N  N  N  -11.574  12.388  36.728   3.751  -2.642  -0.752  H6    P2E  33  
P2E  H7    H7    H  0  1  N  N  N  -10.906  10.023  36.409   2.264  -1.806   1.263  H7    P2E  34  
P2E  H7A   H7A   H  0  1  N  N  N  -11.636   9.640  38.070   1.676  -0.524   0.177  H7A   P2E  35  
P2E  H8    H8    H  0  1  N  N  N  -12.762   8.696  36.257   0.818  -2.310  -1.381  H8    P2E  36  
P2E  H12   H12   H  0  1  N  N  N  -13.078  11.647  35.439  -0.151  -1.897   1.444  H12   P2E  37  
P2E  H11   H11   H  0  1  N  N  N  -15.130   9.517  34.584  -1.422  -4.041  -0.347  H11   P2E  38  
P2E  HO4   HO4   H  0  1  N  N  N  -15.740  12.221  35.022  -2.163  -4.747   1.810  HO4   P2E  39  
P2E  H10   H10   H  0  1  N  N  N  -16.354   9.730  36.672   0.204  -5.627   0.469  H10   P2E  40  
P2E  H10A  H10A  H  0  0  N  N  N  -15.846  11.344  36.958   0.687  -4.558   1.823  H10A  P2E  41  
P2E  H13   H13   H  0  1  N  N  N  -12.784   9.076  33.727  -1.620  -1.726  -1.303  H13   P2E  42  
P2E  H14   H14   H  0  1  N  N  N  -12.032  12.046  33.644  -1.383  -0.013   1.192  H14   P2E  43  
P2E  H15   H15   H  0  1  N  N  N  -11.505   9.549  31.800  -2.168   1.518  -0.800  H15   P2E  44  
P2E  HO5   HO5   H  0  1  N  N  N  -13.169  11.536  31.392  -3.481  -0.928  -1.647  HO5   P2E  45  
P2E  H16   H16   H  0  1  N  N  N   -9.465  10.444  32.596  -4.448  -0.089   0.436  H16   P2E  46  
P2E  H16A  H16A  H  0  0  N  N  N   -9.734  10.871  30.815  -3.612   1.262   1.240  H16A  P2E  47  
P2E  H17   H17   H  0  1  N  N  N  -10.589  13.109  31.837  -4.272   2.772  -0.613  H17   P2E  48  
P2E  H17A  H17A  H  0  0  N  N  N   -9.511  12.605  33.220  -5.107   1.421  -1.417  H17A  P2E  49  
P2E  H18   H18   H  0  1  N  N  N   -8.454  12.505  30.408  -6.600   1.175   0.548  H18   P2E  50  
P2E  H18A  H18A  H  0  0  N  N  N   -8.588  14.104  31.283  -5.764   2.526   1.352  H18A  P2E  51  
P2E  H19   H19   H  0  1  N  N  N   -7.212  13.157  33.134  -6.424   4.036  -0.501  H19   P2E  52  
P2E  H19A  H19A  H  0  0  N  N  N   -6.999  11.652  32.193  -7.259   2.685  -1.305  H19A  P2E  53  
P2E  H20   H20   H  0  1  N  N  N   -6.351  13.547  30.293  -8.752   2.439   0.660  H20   P2E  54  
P2E  H20A  H20A  H  0  0  N  N  N   -5.785  14.359  31.792  -7.917   3.790   1.464  H20A  P2E  55  
P2E  H20B  H20B  H  0  0  N  N  N   -5.151  12.736  31.355  -8.856   4.081  -0.020  H20B  P2E  56  
P2E  HO2   HO2   H  0  1  N  N  N  -15.623   8.757  41.235   5.595   5.714   1.131  HO2   P2E  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P2E  C2   C3    SING  N  N   1  
P2E  C2   C1    SING  N  N   2  
P2E  C3   C4    SING  N  N   3  
P2E  C4   C5    SING  N  N   4  
P2E  C5   C6    DOUB  N  N   5  
P2E  C6   C7    SING  N  N   6  
P2E  C7   C8    SING  N  N   7  
P2E  C8   C9    SING  N  N   8  
P2E  C8   C12   SING  N  N   9  
P2E  C9   O3    DOUB  N  N  10  
P2E  C9   C10   SING  N  Z  11  
P2E  C12  C11   SING  N  N  12  
P2E  C12  C13   SING  N  N  13  
P2E  C11  O4    SING  N  N  14  
P2E  C11  C10   SING  N  N  15  
P2E  C13  C14   DOUB  N  N  16  
P2E  C14  C15   SING  N  N  17  
P2E  C15  O5    SING  N  N  18  
P2E  C15  C16   SING  N  N  19  
P2E  C16  C17   SING  N  N  20  
P2E  C17  C18   SING  N  N  21  
P2E  C18  C19   SING  N  N  22  
P2E  C19  C20   SING  N  N  23  
P2E  O1   C1    DOUB  N  N  24  
P2E  C1   O2    SING  N  N  25  
P2E  C2   H2    SING  N  N  26  
P2E  C2   H2A   SING  N  N  27  
P2E  C3   H3    SING  N  N  28  
P2E  C3   H3A   SING  N  N  29  
P2E  C4   H4    SING  N  N  30  
P2E  C4   H4A   SING  N  N  31  
P2E  C5   H5    SING  N  E  32  
P2E  C6   H6    SING  N  N  33  
P2E  C7   H7    SING  N  N  34  
P2E  C7   H7A   SING  N  N  35  
P2E  C8   H8    SING  N  N  36  
P2E  C12  H12   SING  N  N  37  
P2E  C11  H11   SING  N  N  38  
P2E  O4   HO4   SING  N  N  39  
P2E  C10  H10   SING  N  N  40  
P2E  C10  H10A  SING  N  N  41  
P2E  C13  H13   SING  N  N  42  
P2E  C14  H14   SING  N  N  43  
P2E  C15  H15   SING  N  N  44  
P2E  O5   HO5   SING  N  N  45  
P2E  C16  H16   SING  N  N  46  
P2E  C16  H16A  SING  N  N  47  
P2E  C17  H17   SING  N  N  48  
P2E  C17  H17A  SING  N  N  49  
P2E  C18  H18   SING  N  N  50  
P2E  C18  H18A  SING  N  N  51  
P2E  C19  H19   SING  N  N  52  
P2E  C19  H19A  SING  N  N  53  
P2E  C20  H20   SING  N  N  54  
P2E  C20  H20A  SING  N  N  55  
P2E  C20  H20B  SING  N  N  56  
P2E  O2   HO2   SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P2E  SMILES            ACDLabs               10.04  "O=C1CC(O)C(/C=C/C(O)CCCCC)C1C\C=C/CCCC(=O)O"  
P2E  SMILES_CANONICAL  CACTVS                3.341  "CCCCC[C@H](O)/C=C/[C@H]1[C@H](O)CC(=O)[C@@H]1C\C=C/CCCC(O)=O"  
P2E  SMILES            CACTVS                3.341  "CCCCC[CH](O)C=C[CH]1[CH](O)CC(=O)[CH]1CC=CCCCC(O)=O"  
P2E  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCCC[C@@H](\C=C\[C@H]1[C@@H](CC(=O)[C@@H]1C\C=C/CCCC(=O)O)O)O"  
P2E  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCCCC(C=CC1C(CC(=O)C1CC=CCCCC(=O)O)O)O"  
P2E  InChI             InChI                 1.03   "InChI=1S/C20H32O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-17,19,21,23H,2-3,5-6,8-11,14H2,1H3,(H,24,25)/b7-4-,13-12+/t15-,16+,17+,19+/m0/s1"  
P2E  InChIKey          InChI                 1.03   XEYBRNLFEZDVAW-ARSRFYASSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P2E  "SYSTEMATIC NAME"  ACDLabs               10.04  "(5Z,11alpha,12alpha,13E,15S)-11,15-dihydroxy-9-oxoprosta-5,13-dien-1-oic acid"  
P2E  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P2E  "Create component"   2009-06-04  PDBJ  
P2E  "Modify descriptor"  2011-06-04  RCSB  
P2E  "Initial release"    2014-07-23  RCSB  
P2E  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     P2E
_pdbx_chem_comp_synonyms.name        "Prostaglandin E2"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
