data_0AE
#

_chem_comp.id                                   0AE
_chem_comp.name                                 "(3~{R})-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]-3-[[[6-[[(3~{S})-3-propan-2-yl-2-azoniaspiro[3.3]heptan-2-yl]methyl]naphthalen-1-yl]amino]methyl]piperidin-3-ol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C37 H47 N6 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2021-06-03
_chem_comp.pdbx_modified_date                   2021-10-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       591.809
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    0AE
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7OQL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0AE  C10  C1   C  0  1  Y  N  N  14.037  -22.434  -13.369   -2.590  -1.154  -1.180  C10  0AE   1  
0AE  N12  N1   N  0  1  N  N  N  12.917  -21.232  -11.337   -0.468  -2.046  -0.391  N12  0AE   2  
0AE  C13  C2   C  0  1  N  N  N  11.787  -21.084  -10.397    0.975  -2.231  -0.565  C13  0AE   3  
0AE  C15  C3   C  0  1  N  N  N   9.808  -20.673  -11.735    1.158  -2.352   1.925  C15  0AE   4  
0AE  C17  C4   C  0  1  N  N  N   9.665  -18.664  -13.297    3.319  -1.107   1.816  C17  0AE   5  
0AE  C20  C5   C  0  1  Y  N  N  10.236  -16.639  -11.832    4.991  -1.798   0.311  C20  0AE   6  
0AE  C22  C6   C  0  1  Y  N  N   9.926  -15.022   -9.921    6.913  -2.990  -0.133  C22  0AE   7  
0AE  C24  C7   C  0  1  Y  N  N   9.154  -14.306  -12.251    7.097  -0.701   0.057  C24  0AE   8  
0AE  C26  C8   C  0  1  N  N  N   7.918  -13.632  -14.526    7.262   1.755   0.266  C26  0AE   9  
0AE  C28  C9   C  0  1  Y  N  N   5.769  -14.590  -13.204    8.602   3.432  -1.021  C28  0AE  10  
0AE  C01  C10  C  0  1  N  N  N  22.061  -22.489  -17.188  -10.349   0.677   1.993  C01  0AE  11  
0AE  C02  C11  C  0  1  N  N  N  20.742  -21.948  -16.615   -8.834   0.580   1.806  C02  0AE  12  
0AE  C03  C12  C  0  1  N  N  N  20.193  -20.773  -17.478   -8.365  -0.832   2.164  C03  0AE  13  
0AE  C04  C13  C  0  1  N  N  S  19.687  -23.090  -16.441   -8.480   0.880   0.348  C04  0AE  14  
0AE  C06  C14  C  0  1  N  N  N  17.591  -22.759  -16.380   -6.805  -0.564  -0.734  C06  0AE  15  
0AE  C07  C15  C  0  1  Y  N  N  16.372  -22.640  -15.386   -5.321  -0.760  -0.902  C07  0AE  16  
0AE  C08  C16  C  0  1  Y  N  N  16.383  -21.537  -14.277   -4.611  -1.484   0.054  C08  0AE  17  
0AE  C09  C17  C  0  1  Y  N  N  15.206  -21.430  -13.260   -3.269  -1.679  -0.069  C09  0AE  18  
0AE  C11  C18  C  0  1  Y  N  N  12.858  -22.310  -12.364   -1.199  -1.336  -1.341  C11  0AE  19  
0AE  C14  C19  C  0  1  N  N  R  10.812  -20.000  -10.950    1.531  -3.040   0.609  C14  0AE  20  
0AE  C16  C20  C  0  1  N  N  N   8.970  -19.846  -12.600    1.803  -0.965   1.968  C16  0AE  21  
0AE  C18  C21  C  0  1  N  N  N  11.611  -18.939  -11.749    3.055  -3.122   0.496  C18  0AE  22  
0AE  C27  C22  C  0  1  Y  N  N   6.566  -14.389  -14.513    8.319   2.827   0.189  C27  0AE  23  
0AE  C29  C23  C  0  1  Y  N  N   4.443  -15.340  -13.216    9.575   4.411  -1.093  C29  0AE  24  
0AE  C30  C24  C  0  1  Y  N  N   3.899  -15.894  -14.499   10.261   4.789   0.047  C30  0AE  25  
0AE  C31  C25  C  0  1  Y  N  N   4.692  -15.699  -15.794    9.972   4.189   1.258  C31  0AE  26  
0AE  C32  C26  C  0  1  Y  N  N   6.022  -14.949  -15.796    9.003   3.205   1.329  C32  0AE  27  
0AE  C33  C27  C  0  1  Y  N  N   9.620  -15.655  -12.765    5.730  -0.619   0.299  C33  0AE  28  
0AE  C35  C28  C  0  1  Y  N  N  11.659  -23.289  -12.436   -0.571  -0.804  -2.447  C35  0AE  29  
0AE  C36  C29  C  0  1  Y  N  N  11.609  -24.396  -13.531   -1.292  -0.093  -3.402  C36  0AE  30  
0AE  C37  C30  C  0  1  Y  N  N  12.782  -24.505  -14.547   -2.634   0.097  -3.271  C37  0AE  31  
0AE  C38  C31  C  0  1  Y  N  N  13.998  -23.515  -14.462   -3.311  -0.424  -2.155  C38  0AE  32  
0AE  C39  C32  C  0  1  Y  N  N  15.185  -23.623  -15.490   -4.696  -0.242  -1.995  C39  0AE  33  
0AE  C40  C33  C  0  1  N  N  N  18.678  -23.786  -14.879   -7.107   1.878  -0.812  C40  0AE  34  
0AE  C41  C34  C  0  1  N  N  N  20.059  -23.840  -15.299   -8.252   2.361   0.070  C41  0AE  35  
0AE  C42  C35  C  0  1  N  N  N  20.910  -24.018  -14.010   -8.037   3.371   1.194  C42  0AE  36  
0AE  C43  C36  C  0  1  N  N  N  21.044  -25.508  -14.344   -9.499   3.798   0.970  C43  0AE  37  
0AE  C44  C37  C  0  1  N  N  N  20.475  -25.256  -15.745   -9.361   3.262  -0.468  C44  0AE  38  
0AE  N05  N2   N  1  1  N  N  N  18.496  -22.690  -15.751   -7.054   0.665   0.031  N05  0AE  39  
0AE  N19  N3   N  0  1  N  N  N  10.670  -17.938  -12.423    3.624  -1.770   0.541  N19  0AE  40  
0AE  N21  N4   N  0  1  Y  N  N  10.396  -16.353  -10.430    5.615  -2.954   0.092  N21  0AE  41  
0AE  N23  N5   N  0  1  Y  N  N   9.318  -14.008  -10.852    7.647  -1.896  -0.152  N23  0AE  42  
0AE  N25  N6   N  0  1  N  N  N   8.514  -13.303  -13.190    7.877   0.445   0.034  N25  0AE  43  
0AE  O34  O1   O  0  1  N  N  N  10.179  -19.331   -9.829    0.978  -4.357   0.585  O34  0AE  44  
0AE  H1   H1   H  0  1  N  N  N  11.257  -22.043  -10.302    1.163  -2.766  -1.496  H1   0AE  45  
0AE  H2   H2   H  0  1  N  N  N  12.164  -20.774   -9.411    1.464  -1.258  -0.600  H2   0AE  46  
0AE  H3   H3   H  0  1  N  N  N   9.142  -21.202  -11.037    0.074  -2.252   1.990  H3   0AE  47  
0AE  H4   H4   H  0  1  N  N  N  10.324  -21.404  -12.375    1.519  -2.949   2.763  H4   0AE  48  
0AE  H5   H5   H  0  1  N  N  N  10.191  -19.046  -14.185    3.781  -0.120   1.832  H5   0AE  49  
0AE  H6   H6   H  0  1  N  N  N   8.894  -17.944  -13.609    3.712  -1.705   2.639  H6   0AE  50  
0AE  H7   H7   H  0  1  N  N  N  10.026  -14.788   -8.871    7.389  -3.944  -0.306  H7   0AE  51  
0AE  H8   H8   H  0  1  N  N  N   8.644  -14.253  -15.072    6.800   1.770   1.253  H8   0AE  52  
0AE  H9   H9   H  0  1  N  N  N   7.766  -12.686  -15.066    6.502   1.939  -0.493  H9   0AE  53  
0AE  H10  H10  H  0  1  N  N  N   6.155  -14.196  -12.275    8.067   3.136  -1.911  H10  0AE  54  
0AE  H11  H11  H  0  1  N  N  N  22.423  -23.316  -16.559  -10.836  -0.125   1.439  H11  0AE  55  
0AE  H12  H12  H  0  1  N  N  N  21.893  -22.854  -18.212  -10.590   0.585   3.052  H12  0AE  56  
0AE  H13  H13  H  0  1  N  N  N  22.811  -21.685  -17.204  -10.700   1.640   1.623  H13  0AE  57  
0AE  H14  H14  H  0  1  N  N  N  20.955  -21.546  -15.613   -8.340   1.303   2.456  H14  0AE  58  
0AE  H15  H15  H  0  1  N  N  N  19.251  -20.408  -17.044   -7.275  -0.867   2.151  H15  0AE  59  
0AE  H16  H16  H  0  1  N  N  N  20.929  -19.956  -17.496   -8.725  -1.093   3.159  H16  0AE  60  
0AE  H17  H17  H  0  1  N  N  N  20.012  -21.125  -18.504   -8.760  -1.541   1.437  H17  0AE  61  
0AE  H18  H18  H  0  1  N  N  N  19.525  -23.671  -17.361   -9.160   0.403  -0.358  H18  0AE  62  
0AE  H19  H19  H  0  1  N  N  N  17.570  -21.939  -17.113   -7.275  -0.484  -1.714  H19  0AE  63  
0AE  H20  H20  H  0  1  N  N  N  17.563  -23.724  -16.908   -7.226  -1.416  -0.198  H20  0AE  64  
0AE  H21  H21  H  0  1  N  N  N  17.210  -20.846  -14.215   -5.133  -1.896   0.905  H21  0AE  65  
0AE  H22  H22  H  0  1  N  N  N  15.208  -20.669  -12.494   -2.730  -2.234   0.684  H22  0AE  66  
0AE  H23  H23  H  0  1  N  N  N   8.153  -19.439  -11.985    1.412  -0.356   1.153  H23  0AE  67  
0AE  H24  H24  H  0  1  N  N  N   8.551  -20.497  -13.382    1.577  -0.487   2.921  H24  0AE  68  
0AE  H25  H25  H  0  1  N  N  N  12.210  -19.445  -12.520    3.449  -3.710   1.325  H25  0AE  69  
0AE  H26  H26  H  0  1  N  N  N  12.279  -18.399  -11.062    3.324  -3.598  -0.447  H26  0AE  70  
0AE  H27  H27  H  0  1  N  N  N   3.892  -15.473  -12.297    9.800   4.881  -2.039  H27  0AE  71  
0AE  H28  H28  H  0  1  N  N  N   2.958  -16.425  -14.509   11.021   5.554  -0.009  H28  0AE  72  
0AE  H29  H29  H  0  1  N  N  N   4.305  -16.098  -16.720   10.508   4.484   2.148  H29  0AE  73  
0AE  H30  H30  H  0  1  N  N  N   6.570  -14.822  -16.718    8.778   2.736   2.275  H30  0AE  74  
0AE  H31  H31  H  0  1  N  N  N   9.505  -15.902  -13.810    5.254   0.335   0.472  H31  0AE  75  
0AE  H32  H32  H  0  1  N  N  N  10.853  -23.203  -11.722    0.493  -0.941  -2.574  H32  0AE  76  
0AE  H33  H33  H  0  1  N  N  N  10.773  -25.077  -13.584   -0.779   0.314  -4.260  H33  0AE  77  
0AE  H34  H34  H  0  1  N  N  N  12.760  -25.265  -15.314   -3.175   0.656  -4.020  H34  0AE  78  
0AE  H36  H36  H  0  1  N  N  N  15.170  -24.378  -16.262   -5.259   0.317  -2.728  H36  0AE  79  
0AE  H37  H37  H  0  1  N  N  N  18.535  -23.549  -13.814   -7.404   1.679  -1.841  H37  0AE  80  
0AE  H38  H38  H  0  1  N  N  N  18.088  -24.677  -15.139   -6.213   2.497  -0.742  H38  0AE  81  
0AE  H39  H39  H  0  1  N  N  N  21.861  -23.465  -14.014   -7.859   2.912   2.166  H39  0AE  82  
0AE  H40  H40  H  0  1  N  N  N  20.368  -23.809  -13.076   -7.311   4.147   0.952  H40  0AE  83  
0AE  H41  H41  H  0  1  N  N  N  20.421  -26.165  -13.719  -10.214   3.241   1.575  H41  0AE  84  
0AE  H42  H42  H  0  1  N  N  N  22.081  -25.876  -14.342   -9.651   4.876   1.021  H42  0AE  85  
0AE  H43  H43  H  0  1  N  N  N  19.633  -25.910  -16.015   -9.011   4.009  -1.181  H43  0AE  86  
0AE  H44  H44  H  0  1  N  N  N  21.226  -25.274  -16.548  -10.237   2.717  -0.818  H44  0AE  87  
0AE  H46  H46  H  0  1  N  N  N   9.222  -12.622  -13.375    8.830   0.380  -0.135  H46  0AE  88  
0AE  H47  H47  H  0  1  N  N  N   9.682  -19.962   -9.322    0.013  -4.380   0.655  H47  0AE  89  
0AE  H48  H48  H  0  1  N  N  N  13.737  -21.393  -10.788   -0.914  -2.419   0.385  H48  0AE  90  
0AE  H35  H35  H  0  1  N  N  N  18.646  -21.827  -15.269   -6.447   0.759   0.831  H35  0AE  91  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0AE  C03  C02  SING  N  N   1  
0AE  C01  C02  SING  N  N   2  
0AE  C02  C04  SING  N  N   3  
0AE  C04  N05  SING  N  N   4  
0AE  C04  C41  SING  N  N   5  
0AE  C06  N05  SING  N  N   6  
0AE  C06  C07  SING  N  N   7  
0AE  C32  C31  DOUB  Y  N   8  
0AE  C32  C27  SING  Y  N   9  
0AE  C31  C30  SING  Y  N  10  
0AE  N05  C40  SING  N  N  11  
0AE  C44  C41  SING  N  N  12  
0AE  C44  C43  SING  N  N  13  
0AE  C39  C07  DOUB  Y  N  14  
0AE  C39  C38  SING  Y  N  15  
0AE  C07  C08  SING  Y  N  16  
0AE  C41  C40  SING  N  N  17  
0AE  C41  C42  SING  N  N  18  
0AE  C37  C38  SING  Y  N  19  
0AE  C37  C36  DOUB  Y  N  20  
0AE  C26  C27  SING  N  N  21  
0AE  C26  N25  SING  N  N  22  
0AE  C27  C28  DOUB  Y  N  23  
0AE  C30  C29  DOUB  Y  N  24  
0AE  C38  C10  DOUB  Y  N  25  
0AE  C43  C42  SING  N  N  26  
0AE  C08  C09  DOUB  Y  N  27  
0AE  C36  C35  SING  Y  N  28  
0AE  C10  C09  SING  Y  N  29  
0AE  C10  C11  SING  Y  N  30  
0AE  C17  C16  SING  N  N  31  
0AE  C17  N19  SING  N  N  32  
0AE  C29  C28  SING  Y  N  33  
0AE  N25  C24  SING  N  N  34  
0AE  C33  C24  DOUB  Y  N  35  
0AE  C33  C20  SING  Y  N  36  
0AE  C16  C15  SING  N  N  37  
0AE  C35  C11  DOUB  Y  N  38  
0AE  N19  C20  SING  N  N  39  
0AE  N19  C18  SING  N  N  40  
0AE  C11  N12  SING  N  N  41  
0AE  C24  N23  SING  Y  N  42  
0AE  C20  N21  DOUB  Y  N  43  
0AE  C18  C14  SING  N  N  44  
0AE  C15  C14  SING  N  N  45  
0AE  N12  C13  SING  N  N  46  
0AE  C14  C13  SING  N  N  47  
0AE  C14  O34  SING  N  N  48  
0AE  N23  C22  DOUB  Y  N  49  
0AE  N21  C22  SING  Y  N  50  
0AE  C13  H1   SING  N  N  51  
0AE  C13  H2   SING  N  N  52  
0AE  C15  H3   SING  N  N  53  
0AE  C15  H4   SING  N  N  54  
0AE  C17  H5   SING  N  N  55  
0AE  C17  H6   SING  N  N  56  
0AE  C22  H7   SING  N  N  57  
0AE  C26  H8   SING  N  N  58  
0AE  C26  H9   SING  N  N  59  
0AE  C28  H10  SING  N  N  60  
0AE  C01  H11  SING  N  N  61  
0AE  C01  H12  SING  N  N  62  
0AE  C01  H13  SING  N  N  63  
0AE  C02  H14  SING  N  N  64  
0AE  C03  H15  SING  N  N  65  
0AE  C03  H16  SING  N  N  66  
0AE  C03  H17  SING  N  N  67  
0AE  C04  H18  SING  N  N  68  
0AE  C06  H19  SING  N  N  69  
0AE  C06  H20  SING  N  N  70  
0AE  C08  H21  SING  N  N  71  
0AE  C09  H22  SING  N  N  72  
0AE  C16  H23  SING  N  N  73  
0AE  C16  H24  SING  N  N  74  
0AE  C18  H25  SING  N  N  75  
0AE  C18  H26  SING  N  N  76  
0AE  C29  H27  SING  N  N  77  
0AE  C30  H28  SING  N  N  78  
0AE  C31  H29  SING  N  N  79  
0AE  C32  H30  SING  N  N  80  
0AE  C33  H31  SING  N  N  81  
0AE  C35  H32  SING  N  N  82  
0AE  C36  H33  SING  N  N  83  
0AE  C37  H34  SING  N  N  84  
0AE  C39  H36  SING  N  N  85  
0AE  C40  H37  SING  N  N  86  
0AE  C40  H38  SING  N  N  87  
0AE  C42  H39  SING  N  N  88  
0AE  C42  H40  SING  N  N  89  
0AE  C43  H41  SING  N  N  90  
0AE  C43  H42  SING  N  N  91  
0AE  C44  H43  SING  N  N  92  
0AE  C44  H44  SING  N  N  93  
0AE  N25  H46  SING  N  N  94  
0AE  O34  H47  SING  N  N  95  
0AE  N12  H48  SING  N  N  96  
0AE  N05  H35  SING  N  N  97  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0AE  InChI             InChI                 1.03   "InChI=1S/C37H46N6O/c1-27(2)35-36(15-7-16-36)24-43(35)22-29-13-14-31-30(19-29)11-6-12-32(31)39-23-37(44)17-8-18-42(25-37)34-20-33(40-26-41-34)38-21-28-9-4-3-5-10-28/h3-6,9-14,19-20,26-27,35,39,44H,7-8,15-18,21-25H2,1-2H3,(H,38,40,41)/p+1/t35-,37+/m0/s1"  
0AE  InChIKey          InChI                 1.03   DAMVLLAQUZPVCW-YBZKQSBQSA-O  
0AE  SMILES_CANONICAL  CACTVS                3.385  "CC(C)[C@@H]1[NH+](Cc2ccc3c(NC[C@]4(O)CCCN(C4)c5cc(NCc6ccccc6)ncn5)cccc3c2)CC17CCC7"  
0AE  SMILES            CACTVS                3.385  "CC(C)[CH]1[NH+](Cc2ccc3c(NC[C]4(O)CCCN(C4)c5cc(NCc6ccccc6)ncn5)cccc3c2)CC17CCC7"  
0AE  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)[C@H]1C2(CCC2)C[NH+]1Cc3ccc4c(c3)cccc4NC[C@@]5(CCCN(C5)c6cc(ncn6)NCc7ccccc7)O"  
0AE  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)C1C2(CCC2)C[NH+]1Cc3ccc4c(c3)cccc4NCC5(CCCN(C5)c6cc(ncn6)NCc7ccccc7)O"  
#
_pdbx_chem_comp_identifier.comp_id          0AE
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(3~{R})-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]-3-[[[6-[[(3~{S})-3-propan-2-yl-2-azoniaspiro[3.3]heptan-2-yl]methyl]naphthalen-1-yl]amino]methyl]piperidin-3-ol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0AE  "Create component"  2021-06-03  PDBE  
0AE  "Initial release"   2021-10-20  RCSB  
##
