data_T5D
#

_chem_comp.id                                   T5D
_chem_comp.name                                 "[1-(pyridin-2-yl)cyclopentyl]methanol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H15 N O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-03-16
_chem_comp.pdbx_modified_date                   2020-03-20
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       177.243
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    T5D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5RF0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T5D  C4   C1   C  0  1  Y  N  N  6.156   9.206  12.332   3.304   0.465   0.243  C4   T5D   1  
T5D  C5   C2   C  0  1  Y  N  N  5.835  10.455  11.811   2.701  -0.587   0.916  C5   T5D   2  
T5D  C6   C3   C  0  1  Y  N  N  4.918  10.551  10.779   1.337  -0.775   0.761  C6   T5D   3  
T5D  C7   C4   C  0  1  N  N  N  3.888  10.403   8.005  -1.533  -0.304   1.142  C7   T5D   4  
T5D  C8   C5   C  0  1  N  N  N  3.392   9.827   6.677  -2.888   0.433   1.006  C8   T5D   5  
T5D  C10  C6   C  0  1  N  N  N  3.175   8.132   8.398  -1.484   1.151  -0.854  C10  T5D   6  
T5D  N    N1   N  0  1  Y  N  N  4.620   8.121  10.782   1.233   1.076  -0.679  N    T5D   7  
T5D  C    C7   C  0  1  N  N  N  1.989   9.986   9.617  -1.123  -1.323  -1.123  C    T5D   8  
T5D  O    O1   O  0  1  N  N  N  1.647   9.286  10.773  -0.536  -2.485  -0.534  O    T5D   9  
T5D  C1   C8   C  0  1  N  N  N  3.353   9.485   9.111  -0.857  -0.109  -0.231  C1   T5D  10  
T5D  C2   C9   C  0  1  Y  N  N  4.327   9.371  10.266   0.627   0.086  -0.054  C2   T5D  11  
T5D  C3   C10  C  0  1  Y  N  N  5.525   8.069  11.797   2.528   1.288  -0.551  C3   T5D  12  
T5D  C9   C11  C  0  1  N  N  N  2.700   8.511   6.996  -2.518   1.677   0.162  C9   T5D  13  
T5D  H4   H1   H  0  1  N  N  N  6.876   9.111  13.132   4.365   0.641   0.341  H4   T5D  14  
T5D  H5   H2   H  0  1  N  N  N  6.299  11.345  12.210   3.282  -1.245   1.546  H5   T5D  15  
T5D  H6   H3   H  0  1  N  N  N  4.656  11.515  10.369   0.835  -1.585   1.270  H6   T5D  16  
T5D  H7   H4   H  0  1  N  N  N  3.504  11.425   8.142  -0.931   0.147   1.931  H7   T5D  17  
T5D  H8   H5   H  0  1  N  N  N  4.988  10.419   8.024  -1.692  -1.363   1.344  H8   T5D  18  
T5D  H9   H6   H  0  1  N  N  N  2.683  10.522   6.205  -3.615  -0.188   0.481  H9   T5D  19  
T5D  H10  H7   H  0  1  N  N  N  4.241   9.653   6.000  -3.267   0.729   1.985  H10  T5D  20  
T5D  H14  H8   H  0  1  N  N  N  2.423   7.515   8.912  -0.715   1.903  -1.028  H14  T5D  21  
T5D  H13  H9   H  0  1  N  N  N  4.129   7.586   8.353  -1.977   0.897  -1.793  H13  T5D  22  
T5D  H2   H10  H  0  1  N  N  N  1.225   9.817   8.844  -0.685  -1.154  -2.107  H2   T5D  23  
T5D  H1   H11  H  0  1  N  N  N  2.052  11.061   9.842  -2.198  -1.470  -1.225  H1   T5D  24  
T5D  H    H12  H  0  1  N  N  N  0.805   9.591  11.091  -0.666  -3.294  -1.047  H    T5D  25  
T5D  H3   H13  H  0  1  N  N  N  5.772   7.104  12.214   2.990   2.110  -1.078  H3   T5D  26  
T5D  H11  H14  H  0  1  N  N  N  1.607   8.637   6.981  -3.397   2.063  -0.354  H11  T5D  27  
T5D  H12  H15  H  0  1  N  N  N  2.990   7.738   6.269  -2.075   2.448   0.792  H12  T5D  28  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T5D  C    O    SING  N  N   1  
T5D  C1   C    SING  N  N   2  
T5D  C2   C1   SING  N  N   3  
T5D  C2   N    DOUB  Y  N   4  
T5D  N    C3   SING  Y  N   5  
T5D  C3   C4   DOUB  Y  N   6  
T5D  C4   C5   SING  Y  N   7  
T5D  C5   C6   DOUB  Y  N   8  
T5D  C6   C2   SING  Y  N   9  
T5D  C1   C7   SING  N  N  10  
T5D  C7   C8   SING  N  N  11  
T5D  C8   C9   SING  N  N  12  
T5D  C9   C10  SING  N  N  13  
T5D  C10  C1   SING  N  N  14  
T5D  C4   H4   SING  N  N  15  
T5D  C5   H5   SING  N  N  16  
T5D  C6   H6   SING  N  N  17  
T5D  C7   H7   SING  N  N  18  
T5D  C7   H8   SING  N  N  19  
T5D  C8   H9   SING  N  N  20  
T5D  C8   H10  SING  N  N  21  
T5D  C10  H14  SING  N  N  22  
T5D  C10  H13  SING  N  N  23  
T5D  C    H2   SING  N  N  24  
T5D  C    H1   SING  N  N  25  
T5D  O    H    SING  N  N  26  
T5D  C3   H3   SING  N  N  27  
T5D  C9   H11  SING  N  N  28  
T5D  C9   H12  SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T5D  SMILES            ACDLabs               12.01  "c1ccc(nc1)C2(CCCC2)CO"  
T5D  InChI             InChI                 1.03   "InChI=1S/C11H15NO/c13-9-11(6-2-3-7-11)10-5-1-4-8-12-10/h1,4-5,8,13H,2-3,6-7,9H2"  
T5D  InChIKey          InChI                 1.03   NQXVUFAYASZGFN-UHFFFAOYSA-N  
T5D  SMILES_CANONICAL  CACTVS                3.385  "OCC1(CCCC1)c2ccccn2"  
T5D  SMILES            CACTVS                3.385  "OCC1(CCCC1)c2ccccn2"  
T5D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccnc(c1)C2(CCCC2)CO"  
T5D  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccnc(c1)C2(CCCC2)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T5D  "SYSTEMATIC NAME"  ACDLabs               12.01  "[1-(pyridin-2-yl)cyclopentyl]methanol"  
T5D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(1-pyridin-2-ylcyclopentyl)methanol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T5D  "Create component"  2020-03-16  RCSB  
T5D  "Initial release"   2020-03-25  RCSB  
##
