data_ROD
# 
_chem_comp.id                                    ROD 
_chem_comp.name                                  "2,6-dioxo-5-{2-[2-(trifluoromethyl)phenyl]ethyl}-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H11 F3 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-12-03 
_chem_comp.pdbx_modified_date                    2013-11-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        328.243 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ROD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3W2N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ROD OAA OAA O 0 1 N N N -3.910 -14.830 14.230 3.202  3.144  -0.105 OAA ROD 1  
ROD CAP CAP C 0 1 N N N -5.145 -14.695 14.037 2.235  2.210  -0.183 CAP ROD 2  
ROD OAD OAD O 0 1 N N N -5.887 -15.683 13.976 1.075  2.547  -0.308 OAD ROD 3  
ROD CAS CAS C 0 1 N N N -5.722 -13.386 13.914 2.586  0.772  -0.118 CAS ROD 4  
ROD NAN NAN N 0 1 N N N -5.336 -12.528 14.985 3.879  0.384  0.161  NAN ROD 5  
ROD CAU CAU C 0 1 N N N -5.732 -11.184 14.991 4.218  -0.915 0.224  CAU ROD 6  
ROD OAB OAB O 0 1 N N N -5.369 -10.428 15.892 5.369  -1.215 0.473  OAB ROD 7  
ROD NAO NAO N 0 1 N N N -6.540 -10.768 13.964 3.316  -1.892 0.020  NAO ROD 8  
ROD CAV CAV C 0 1 N N N -6.903 -11.570 12.904 2.031  -1.589 -0.257 CAV ROD 9  
ROD OAC OAC O 0 1 N N N -7.582 -10.996 12.078 1.214  -2.470 -0.442 OAC ROD 10 
ROD CAT CAT C 0 1 N N N -6.477 -12.940 12.828 1.636  -0.176 -0.327 CAT ROD 11 
ROD CAM CAM C 0 1 N N N -6.783 -13.868 11.680 0.213  0.212  -0.634 CAM ROD 12 
ROD CAL CAL C 0 1 N N N -5.951 -13.316 10.482 -0.583 0.305  0.669  CAL ROD 13 
ROD CAQ CAQ C 0 1 Y N N -5.979 -14.251 9.310  -1.959 0.848  0.381  CAQ ROD 14 
ROD CAJ CAJ C 0 1 Y N N -7.083 -14.164 8.483  -2.183 2.212  0.413  CAJ ROD 15 
ROD CAH CAH C 0 1 Y N N -7.265 -14.974 7.350  -3.445 2.711  0.149  CAH ROD 16 
ROD CAI CAI C 0 1 Y N N -6.339 -16.018 7.178  -4.482 1.846  -0.147 CAI ROD 17 
ROD CAK CAK C 0 1 Y N N -5.229 -16.151 7.976  -4.257 0.482  -0.180 CAK ROD 18 
ROD CAR CAR C 0 1 Y N N -5.012 -15.310 9.071  -2.994 -0.016 0.079  CAR ROD 19 
ROD CAW CAW C 0 1 N N N -3.839 -15.548 9.904  -2.749 -1.503 0.044  CAW ROD 20 
ROD FAF FAF F 0 1 N N N -2.983 -14.569 9.790  -2.203 -1.914 1.264  FAF ROD 21 
ROD FAG FAG F 0 1 N N N -4.160 -15.670 11.191 -3.959 -2.170 -0.175 FAG ROD 22 
ROD FAE FAE F 0 1 N N N -3.171 -16.651 9.548  -1.857 -1.804 -0.991 FAE ROD 23 
ROD H1  H1  H 0 1 N N N -3.700 -15.753 14.309 2.924  4.069  -0.152 H1  ROD 24 
ROD H2  H2  H 0 1 N N N -6.885 -9.830  13.986 3.592  -2.820 0.073  H2  ROD 25 
ROD H4  H4  H 0 1 N N N -7.857 -13.851 11.445 0.200  1.179  -1.137 H4  ROD 26 
ROD H5  H5  H 0 1 N N N -6.477 -14.896 11.922 -0.238 -0.540 -1.282 H5  ROD 27 
ROD H6  H6  H 0 1 N N N -4.908 -13.180 10.805 -0.670 -0.687 1.113  H6  ROD 28 
ROD H7  H7  H 0 1 N N N -6.369 -12.346 10.174 -0.068 0.969  1.363  H7  ROD 29 
ROD H8  H8  H 0 1 N N N -7.845 -13.436 8.720  -1.373 2.887  0.645  H8  ROD 30 
ROD H9  H9  H 0 1 N N N -8.070 -14.805 6.651  -3.621 3.776  0.174  H9  ROD 31 
ROD H10 H10 H 0 1 N N N -6.506 -16.740 6.392  -5.468 2.236  -0.353 H10 ROD 32 
ROD H11 H11 H 0 1 N N N -4.508 -16.923 7.752  -5.068 -0.193 -0.411 H11 ROD 33 
ROD H12 H12 H 0 1 N N N -4.780 -12.887 15.735 4.557  1.060  0.314  H12 ROD 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ROD CAI CAH DOUB Y N 1  
ROD CAI CAK SING Y N 2  
ROD CAH CAJ SING Y N 3  
ROD CAK CAR DOUB Y N 4  
ROD CAJ CAQ DOUB Y N 5  
ROD CAR CAQ SING Y N 6  
ROD CAR CAW SING N N 7  
ROD CAQ CAL SING N N 8  
ROD FAE CAW SING N N 9  
ROD FAF CAW SING N N 10 
ROD CAW FAG SING N N 11 
ROD CAL CAM SING N N 12 
ROD CAM CAT SING N N 13 
ROD OAC CAV DOUB N N 14 
ROD CAT CAV SING N N 15 
ROD CAT CAS DOUB N N 16 
ROD CAV NAO SING N N 17 
ROD CAS CAP SING N N 18 
ROD CAS NAN SING N N 19 
ROD NAO CAU SING N N 20 
ROD OAD CAP DOUB N N 21 
ROD CAP OAA SING N N 22 
ROD NAN CAU SING N N 23 
ROD CAU OAB DOUB N N 24 
ROD OAA H1  SING N N 25 
ROD NAO H2  SING N N 26 
ROD CAM H4  SING N N 27 
ROD CAM H5  SING N N 28 
ROD CAL H6  SING N N 29 
ROD CAL H7  SING N N 30 
ROD CAJ H8  SING N N 31 
ROD CAH H9  SING N N 32 
ROD CAI H10 SING N N 33 
ROD CAK H11 SING N N 34 
ROD NAN H12 SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ROD SMILES           ACDLabs              12.01 "O=C1NC(C(=O)O)=C(C(=O)N1)CCc2ccccc2C(F)(F)F"                                                                                  
ROD InChI            InChI                1.03  "InChI=1S/C14H11F3N2O4/c15-14(16,17)9-4-2-1-3-7(9)5-6-8-10(12(21)22)18-13(23)19-11(8)20/h1-4H,5-6H2,(H,21,22)(H2,18,19,20,23)" 
ROD InChIKey         InChI                1.03  AWIYFELWZKLJAG-UHFFFAOYSA-N                                                                                                    
ROD SMILES_CANONICAL CACTVS               3.370 "OC(=O)C1=C(CCc2ccccc2C(F)(F)F)C(=O)NC(=O)N1"                                                                                  
ROD SMILES           CACTVS               3.370 "OC(=O)C1=C(CCc2ccccc2C(F)(F)F)C(=O)NC(=O)N1"                                                                                  
ROD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)CCC2=C(NC(=O)NC2=O)C(=O)O)C(F)(F)F"                                                                                
ROD SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)CCC2=C(NC(=O)NC2=O)C(=O)O)C(F)(F)F"                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ROD "SYSTEMATIC NAME" ACDLabs              12.01 "2,6-dioxo-5-{2-[2-(trifluoromethyl)phenyl]ethyl}-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" 
ROD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2,4-bis(oxidanylidene)-5-[2-[2-(trifluoromethyl)phenyl]ethyl]-1H-pyrimidine-6-carboxylic acid"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ROD "Create component" 2012-12-03 PDBJ 
ROD "Initial release"  2013-12-04 RCSB 
# 
