data_P4D
#

_chem_comp.id                                   P4D
_chem_comp.name                                 "(2R)-2-{[(S)-[(1R)-1-amino-2-(4-hydroxyphenyl)ethyl](hydroxy)phosphoryl]methyl}butanedioic acid"
_chem_comp.type                                 PEPTIDE-LIKE
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H18 N O7 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "L-TYR-D-ASP PHOSPHINATE PSEUDODIPEPTIDE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-05-18
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       331.258
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    P4D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3S2N
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P4D  C1    C1    C  0  1  N  N  N  -25.098  32.140  -15.350  -2.694   1.996   0.114  C1    P4D   1  
P4D  N1    N1    N  0  1  N  N  N  -23.897  30.251  -16.460  -0.844   3.346   0.980  N1    P4D   2  
P4D  C2    C2    C  0  1  N  N  R  -24.461  30.751  -15.188  -1.380   1.981   0.896  C2    P4D   3  
P4D  P3    P3    P  0  1  N  N  N  -25.708  29.497  -14.734  -0.177   0.908   0.043  P3    P4D   4  
P4D  C4    C4    C  0  1  N  N  N  -26.306  29.824  -13.064   1.390   0.891   0.975  C4    P4D   5  
P4D  C5    C5    C  0  1  N  N  R  -27.842  29.998  -12.920   2.356  -0.105   0.329  C5    P4D   6  
P4D  C6    C6    C  0  1  N  N  N  -28.647  28.816  -13.483   2.910   0.485  -0.942  C6    P4D   7  
P4D  C7    C7    C  0  1  N  N  N  -28.135  30.331  -11.459   3.503  -0.401   1.296  C7    P4D   8  
P4D  C8    C8    C  0  1  N  N  N  -27.702  31.727  -11.022   4.388  -1.473   0.712  C8    P4D   9  
P4D  CG    CG    C  0  1  Y  N  N  -24.175  33.329  -15.268  -3.244   0.595   0.028  CG    P4D  10  
P4D  OH    OH    O  0  1  N  N  N  -21.720  36.703  -15.162  -4.747  -3.240  -0.207  OH    P4D  11  
P4D  CZ    CZ    C  0  1  Y  N  N  -22.534  35.583  -15.205  -4.252  -1.977  -0.129  CZ    P4D  12  
P4D  O31   O31   O  0  1  N  N  N  -25.007  28.159  -14.800   0.087   1.473  -1.441  O31   P4D  13  
P4D  O32   O32   O  0  1  N  N  N  -26.904  29.542  -15.747  -0.716  -0.467  -0.041  O32   P4D  14  
P4D  O61   O61   O  0  1  N  N  N  -29.866  28.942  -13.545   3.784  -0.215  -1.681  O61   P4D  15  
P4D  O62   O62   O  0  1  N  N  N  -28.033  27.793  -13.853   2.567   1.589  -1.295  O62   P4D  16  
P4D  O81   O81   O  0  1  N  N  N  -27.932  32.655  -11.820   4.127  -1.949  -0.367  O81   P4D  17  
P4D  O82   O82   O  0  1  N  N  N  -27.139  31.831   -9.924   5.466  -1.897   1.391  O82   P4D  18  
P4D  CD1   CD1   C  0  1  Y  N  N  -24.252  34.302  -16.263  -2.886  -0.223  -1.028  CD1   P4D  19  
P4D  CD2   CD2   C  0  1  Y  N  N  -23.257  33.504  -14.237  -4.099   0.128   1.009  CD2   P4D  20  
P4D  CE1   CE1   C  0  1  Y  N  N  -23.438  35.429  -16.234  -3.388  -1.508  -1.109  CE1   P4D  21  
P4D  CE2   CE2   C  0  1  Y  N  N  -22.440  34.633  -14.204  -4.604  -1.156   0.933  CE2   P4D  22  
P4D  H1    H1    H  0  1  N  N  N  -25.839  32.251  -14.545  -3.413   2.637   0.624  H1    P4D  23  
P4D  H1A   H1A   H  0  1  N  N  N  -25.569  32.165  -16.344  -2.515   2.378  -0.891  H1A   P4D  24  
P4D  HN1   HN1   H  0  1  N  N  N  -23.493  29.348  -16.314  -0.670   3.723   0.060  HN1   P4D  25  
P4D  HN1A  HN1A  H  0  0  N  N  N  -24.624  30.184  -17.143  -1.463   3.946   1.505  HN1A  P4D  26  
P4D  H2    H2    H  0  1  N  N  N  -23.689  30.881  -14.415  -1.559   1.599   1.901  H2    P4D  27  
P4D  H4    H4    H  0  1  N  N  N  -26.011  28.971  -12.435   1.832   1.887   0.961  H4    P4D  28  
P4D  H4A   H4A   H  0  1  N  N  N  -25.835  30.757  -12.722   1.196   0.593   2.006  H4A   P4D  29  
P4D  H5    H5    H  0  1  N  N  N  -28.187  30.833  -13.547   1.825  -1.029   0.100  H5    P4D  30  
P4D  H7    H7    H  0  1  N  N  N  -29.222  30.255  -11.310   4.088   0.505   1.456  H7    P4D  31  
P4D  H7A   H7A   H  0  1  N  N  N  -27.597  29.602  -10.835   3.097  -0.745   2.248  H7A   P4D  32  
P4D  HOH   HOH   H  0  1  N  N  N  -21.159  36.658  -14.397  -5.582  -3.306  -0.690  HOH   P4D  33  
P4D  HO31  HO31  H  0  0  N  N  N  -25.434  27.609  -15.446   0.442   2.372  -1.462  HO31  P4D  34  
P4D  HO61  HO61  H  0  0  N  N  N  -30.248  28.153  -13.911   4.111   0.205  -2.489  HO61  P4D  35  
P4D  HO82  HO82  H  0  0  N  N  N  -26.902  32.739   -9.774   6.003  -2.585   0.975  HO82  P4D  36  
P4D  HD1   HD1   H  0  1  N  N  N  -24.957  34.178  -17.072  -2.214   0.143  -1.790  HD1   P4D  37  
P4D  HD2   HD2   H  0  1  N  N  N  -23.177  32.761  -13.458  -4.374   0.767   1.835  HD2   P4D  38  
P4D  HE1   HE1   H  0  1  N  N  N  -23.513  36.176  -17.010  -3.108  -2.146  -1.934  HE1   P4D  39  
P4D  HE2   HE2   H  0  1  N  N  N  -21.734  34.766  -13.397  -5.276  -1.519   1.696  HE2   P4D  40  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P4D  C1   CG    SING  N  N   1  
P4D  C1   C2    SING  N  N   2  
P4D  C1   H1    SING  N  N   3  
P4D  C1   H1A   SING  N  N   4  
P4D  N1   C2    SING  N  N   5  
P4D  N1   HN1   SING  N  N   6  
P4D  N1   HN1A  SING  N  N   7  
P4D  C2   P3    SING  N  N   8  
P4D  C2   H2    SING  N  N   9  
P4D  O32  P3    DOUB  N  N  10  
P4D  O31  P3    SING  N  N  11  
P4D  P3   C4    SING  N  N  12  
P4D  C4   C5    SING  N  N  13  
P4D  C4   H4    SING  N  N  14  
P4D  C4   H4A   SING  N  N  15  
P4D  C6   C5    SING  N  N  16  
P4D  C5   C7    SING  N  N  17  
P4D  C5   H5    SING  N  N  18  
P4D  O62  C6    DOUB  N  N  19  
P4D  O61  C6    SING  N  N  20  
P4D  C7   C8    SING  N  N  21  
P4D  C7   H7    SING  N  N  22  
P4D  C7   H7A   SING  N  N  23  
P4D  O81  C8    DOUB  N  N  24  
P4D  C8   O82   SING  N  N  25  
P4D  CD1  CG    DOUB  Y  N  26  
P4D  CG   CD2   SING  Y  N  27  
P4D  CZ   OH    SING  N  N  28  
P4D  OH   HOH   SING  N  N  29  
P4D  CE1  CZ    DOUB  Y  N  30  
P4D  CZ   CE2   SING  Y  N  31  
P4D  O31  HO31  SING  N  N  32  
P4D  O61  HO61  SING  N  N  33  
P4D  O82  HO82  SING  N  N  34  
P4D  CD1  CE1   SING  Y  N  35  
P4D  CD1  HD1   SING  N  N  36  
P4D  CD2  CE2   DOUB  Y  N  37  
P4D  CD2  HD2   SING  N  N  38  
P4D  CE1  HE1   SING  N  N  39  
P4D  CE2  HE2   SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P4D  SMILES            ACDLabs               12.01  "O=C(O)C(CC(=O)O)CP(=O)(O)C(N)Cc1ccc(O)cc1"  
P4D  SMILES_CANONICAL  CACTVS                3.370  "N[C@@H](Cc1ccc(O)cc1)[P](O)(=O)C[C@H](CC(O)=O)C(O)=O"  
P4D  SMILES            CACTVS                3.370  "N[CH](Cc1ccc(O)cc1)[P](O)(=O)C[CH](CC(O)=O)C(O)=O"  
P4D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "c1cc(ccc1C[C@H](N)P(=O)(C[C@H](CC(=O)O)C(=O)O)O)O"  
P4D  SMILES            "OpenEye OEToolkits"  1.7.2  "c1cc(ccc1CC(N)P(=O)(CC(CC(=O)O)C(=O)O)O)O"  
P4D  InChI             InChI                 1.03   "InChI=1S/C13H18NO7P/c14-11(5-8-1-3-10(15)4-2-8)22(20,21)7-9(13(18)19)6-12(16)17/h1-4,9,11,15H,5-7,14H2,(H,16,17)(H,18,19)(H,20,21)/t9-,11+/m0/s1"  
P4D  InChIKey          InChI                 1.03   UESSIRUCJXFQBC-GXSJLCMTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P4D  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R)-2-{[(S)-[(1R)-1-amino-2-(4-hydroxyphenyl)ethyl](hydroxy)phosphoryl]methyl}butanedioic acid"  
P4D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "(2R)-2-[[[(1R)-1-azanyl-2-(4-hydroxyphenyl)ethyl]-oxidanyl-phosphoryl]methyl]butanedioic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P4D  "Create component"      2011-05-18  RCSB  
P4D  "Modify synonyms"       2011-05-27  RCSB  
P4D  "Modify aromatic_flag"  2011-06-04  RCSB  
P4D  "Modify descriptor"     2011-06-04  RCSB  
P4D  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     P4D
_pdbx_chem_comp_synonyms.name        "L-TYR-D-ASP PHOSPHINATE PSEUDODIPEPTIDE"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
