data_HDD
#

_chem_comp.id                                   HDD
_chem_comp.name                                 "CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C34 H32 Fe N4 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        HEME
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2000-08-22
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       632.487
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    HDD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1GGJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HDD  FE    FE      FE  0  0  N  N  N  -1.372   4.997   -8.363  -0.981   0.084  -0.437  FE    HDD   1  
HDD  CHA   CHA     C   0  1  N  N  N   1.937   5.951   -8.038   2.325   0.234  -0.549  CHA   HDD   2  
HDD  CHB   CHB     C   0  1  N  N  N  -1.768   7.424  -10.772  -1.307   3.318  -1.126  CHB   HDD   3  
HDD  CHC   CHC     C   0  1  N  N  N  -4.501   3.711   -8.970  -4.032   0.182   0.918  CHC   HDD   4  
HDD  CHD   CHD     C   0  1  N  N  N  -0.984   2.863   -5.612  -0.781  -3.205  -0.136  CHD   HDD   5  
HDD  NA    "N A"   N   0  1  Y  N  N  -0.087   6.296   -9.348   0.224   1.526  -0.489  NA    HDD   6  
HDD  C1A   C1A     C   0  1  Y  N  N   1.199   6.597   -8.974   1.573   1.458  -0.359  C1A   HDD   7  
HDD  C2A   C2A     C   0  1  Y  N  N   1.568   7.748   -9.842   2.062   2.723  -0.059  C2A   HDD   8  
HDD  C3A   C3A     C   0  1  Y  N  N   0.620   8.114  -10.701   1.004   3.598  -0.196  C3A   HDD   9  
HDD  C4A   C4A     C   0  1  Y  N  N  -0.502   7.228  -10.312  -0.086   2.844  -0.637  C4A   HDD  10  
HDD  CMA   CMA     C   0  1  N  N  N   0.554   9.266  -11.719   1.032   5.088   0.015  CMA   HDD  11  
HDD  CAA   CAA     C   0  1  N  N  N   3.007   8.262   -9.885   3.474   3.062   0.336  CAA   HDD  12  
HDD  CBA   CBA     C   0  1  N  N  N   3.216   9.566   -8.987   3.612   2.982   1.858  CBA   HDD  13  
HDD  CGA   CGA     C   0  1  N  N  N   4.682   9.963   -9.340   5.026   3.322   2.253  CGA   HDD  14  
HDD  O1A   O1A     O   0  1  N  N  N   5.443   9.609   -8.422   5.840   3.599   1.405  O1A   HDD  15  
HDD  O2A   O2A     O   0  1  N  N  N   4.810  10.242  -10.561   5.381   3.316   3.548  O2A   HDD  16  
HDD  NB    "N B"   N   0  1  Y  N  N  -2.810   5.478   -9.643  -2.424   1.280  -0.502  NB    HDD  17  
HDD  C1B   C1B     C   0  1  Y  N  N  -2.754   6.459  -10.551  -2.426   2.539  -1.045  C1B   HDD  18  
HDD  C2B   C2B     C   0  1  Y  N  N  -4.055   6.550  -11.258  -3.750   2.905  -1.389  C2B   HDD  19  
HDD  C3B   C3B     C   0  1  Y  N  N  -4.746   5.614  -10.585  -4.573   2.032  -0.723  C3B   HDD  20  
HDD  C4B   C4B     C   0  1  Y  N  N  -3.970   4.733   -9.744  -3.675   1.100   0.003  C4B   HDD  21  
HDD  CMB   CMB     C   0  1  N  N  N  -4.588   7.847  -11.935  -4.162   4.027  -2.303  CMB   HDD  22  
HDD  CAB   CAB     C   0  1  N  N  N  -6.242   5.252  -10.731  -6.043   2.016  -0.718  CAB   HDD  23  
HDD  CBB   CBB     C   0  1  N  N  N  -7.064   6.198  -10.906  -6.695   1.029  -0.112  CBB   HDD  24  
HDD  NC    "N C"   N   0  1  Y  N  N  -2.416   3.341   -7.640  -2.044  -1.168   0.486  NC    HDD  25  
HDD  C1C   C1C     C   0  1  Y  N  N  -3.765   3.194   -7.940  -3.199  -0.920   1.155  C1C   HDD  26  
HDD  C2C   C2C     C   0  1  Y  N  N  -4.307   2.223   -6.986  -3.455  -1.966   2.036  C2C   HDD  27  
HDD  C3C   C3C     C   0  1  Y  N  N  -3.327   2.053   -6.068  -2.565  -2.988   1.683  C3C   HDD  28  
HDD  C4C   C4C     C   0  1  Y  N  N  -2.171   2.893   -6.376  -1.776  -2.481   0.630  C4C   HDD  29  
HDD  CMC   CMC     C   0  1  N  N  N  -5.737   1.617   -6.933  -4.530  -2.019   3.086  CMC   HDD  30  
HDD  CAC   CAC     C   0  1  N  N  N  -3.343   1.371   -4.698  -2.464  -4.328   2.280  CAC   HDD  31  
HDD  CBC   CBC     C   0  1  N  N  N  -4.451   0.828   -4.392  -2.387  -4.464   3.601  CBC   HDD  32  
HDD  ND    "N D"   N   0  1  N  N  N   0.309   4.433   -7.215   0.385  -1.184  -0.666  ND    HDD  33  
HDD  C1D   C1D     C   0  1  N  N  N   0.033   3.611   -6.138   0.192  -2.544  -0.736  C1D   HDD  34  
HDD  C2D   C2D     C   0  1  N  N  S   1.327   3.613   -5.289   1.320  -3.137  -1.574  C2D   HDD  35  
HDD  C3D   C3D     C   0  1  N  N  R   2.152   4.425   -5.806   2.459  -2.196  -1.191  C3D   HDD  36  
HDD  C4D   C4D     C   0  1  N  N  N   1.494   5.042   -7.021   1.725  -0.927  -0.753  C4D   HDD  37  
HDD  CMD   CMD     C   0  1  N  N  N   1.721   2.152   -4.934   1.006  -3.038  -3.059  CMD   HDD  38  
HDD  CAD   CAD     C   0  1  N  N  N   3.437   4.032   -6.622   3.371  -1.896  -2.381  CAD   HDD  39  
HDD  CBD   CBD     C   0  1  N  N  N   4.617   4.653   -5.894   4.762  -2.331  -1.886  CBD   HDD  40  
HDD  CGD   CGD     C   0  1  N  N  N   4.079   5.739   -5.080   4.557  -2.828  -0.473  CGD   HDD  41  
HDD  O1D   O1D     O   0  1  N  N  N   2.780   5.697   -5.156   3.269  -2.719  -0.123  O1D   HDD  42  
HDD  O2D   O2D     O   0  1  N  N  N   4.619   6.672   -4.565   5.436  -3.266   0.245  O2D   HDD  43  
HDD  OND   OND     O   0  1  N  N  N   1.046   4.145   -3.894   1.603  -4.471  -1.182  OND   HDD  44  
HDD  HHA   HHA     H   0  1  N  N  N   3.011   6.190   -8.111   3.410   0.274  -0.520  HHA   HDD  45  
HDD  HHB   HHB     H   0  1  N  N  N  -1.992   8.355  -11.318  -1.364   4.302  -1.572  HHB   HDD  46  
HDD  HHC   HHC     H   0  1  N  N  N  -5.508   3.309   -9.173  -4.955   0.292   1.471  HHC   HDD  47  
HDD  HHD   HHD     H   0  1  N  N  N  -0.860   2.297   -4.673  -0.839  -4.283  -0.213  HHD   HDD  48  
HDD  HMA1  1HMA    H   0  0  N  N  N  -0.240   9.572  -12.438   1.278   5.584  -0.924  HMA1  HDD  49  
HDD  HMA2  2HMA    H   0  0  N  N  N   0.756  10.183  -11.118   0.053   5.425   0.358  HMA2  HDD  50  
HDD  HMA3  3HMA    H   0  0  N  N  N   1.466   9.137  -12.346   1.783   5.335   0.765  HMA3  HDD  51  
HDD  HAA1  1HAA    H   0  0  N  N  N   3.728   7.460   -9.602   4.161   2.354  -0.128  HAA1  HDD  52  
HDD  HAA2  2HAA    H   0  0  N  N  N   3.338   8.439  -10.934   3.713   4.072   0.002  HAA2  HDD  53  
HDD  HBA1  1HBA    H   0  0  N  N  N   2.458  10.370   -9.135   2.925   3.690   2.322  HBA1  HDD  54  
HDD  HBA2  2HBA    H   0  0  N  N  N   3.010   9.430   -7.899   3.373   1.973   2.192  HBA2  HDD  55  
HDD  H2A   H2A     H   0  1  N  N  N   5.703  10.483  -10.776   6.288   3.534   3.801  H2A   HDD  56  
HDD  HMB1  1HMB    H   0  0  N  N  N  -5.565   7.915  -12.466  -4.231   3.656  -3.325  HMB1  HDD  57  
HDD  HMB2  2HMB    H   0  0  N  N  N  -4.579   8.648  -11.159  -5.133   4.412  -1.990  HMB2  HDD  58  
HDD  HMB3  3HMB    H   0  0  N  N  N  -3.802   8.190  -12.648  -3.422   4.825  -2.255  HMB3  HDD  59  
HDD  HAB   HAB     H   0  1  N  N  N  -6.747   4.271  -10.709  -6.593   2.806  -1.208  HAB   HDD  60  
HDD  HBB1  1HBB    H   0  0  N  N  N  -6.558   7.178  -10.927  -7.771   1.069  -0.021  HBB1  HDD  61  
HDD  HBB2  2HBB    H   0  0  N  N  N  -8.131   5.939  -11.010  -6.150   0.188   0.291  HBB2  HDD  62  
HDD  HMC1  1HMC    H   0  0  N  N  N  -6.149   0.878   -6.207  -5.435  -2.448   2.658  HMC1  HDD  63  
HDD  HMC2  2HMC    H   0  0  N  N  N  -6.431   2.489   -6.900  -4.194  -2.636   3.919  HMC2  HDD  64  
HDD  HMC3  3HMC    H   0  0  N  N  N  -5.913   1.176   -7.942  -4.739  -1.010   3.443  HMC3  HDD  65  
HDD  HAC   HAC     H   0  1  N  N  N  -2.556   1.270   -3.931  -2.451  -5.202   1.646  HAC   HDD  66  
HDD  HBC1  1HBC    H   0  0  N  N  N  -5.237   0.928   -5.158  -2.399  -3.590   4.235  HBC1  HDD  67  
HDD  HBC2  2HBC    H   0  0  N  N  N  -4.462   0.336   -3.404  -2.313  -5.448   4.039  HBC2  HDD  68  
HDD  HMD1  1HMD    H   0  0  N  N  N   2.653   2.153   -4.322   1.000  -1.990  -3.360  HMD1  HDD  69  
HDD  HMD2  2HMD    H   0  0  N  N  N   0.890   1.602   -4.432   1.765  -3.576  -3.627  HMD2  HDD  70  
HDD  HMD3  3HMD    H   0  0  N  N  N   1.814   1.509   -5.840   0.027  -3.477  -3.253  HMD3  HDD  71  
HDD  HAD1  1HAD    H   0  0  N  N  N   3.542   2.932   -6.776   3.072  -2.478  -3.248  HAD1  HDD  72  
HDD  HAD2  2HAD    H   0  0  N  N  N   3.381   4.318   -7.698   3.361  -0.833  -2.609  HAD2  HDD  73  
HDD  HBD1  1HBD    H   0  0  N  N  N   5.211   3.914   -5.306   5.156  -3.129  -2.514  HBD1  HDD  74  
HDD  HBD2  2HBD    H   0  0  N  N  N   5.435   4.978   -6.577   5.447  -1.483  -1.891  HBD2  HDD  75  
HDD  HND   HND     H   0  1  N  N  N   1.840   4.146   -3.372   0.797  -4.984  -1.335  HND   HDD  76  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HDD  FE   NA    SING  N  N   1  
HDD  FE   NB    SING  N  N   2  
HDD  FE   NC    SING  N  N   3  
HDD  FE   ND    SING  N  N   4  
HDD  CHA  C1A   SING  N  N   5  
HDD  CHA  C4D   DOUB  N  N   6  
HDD  CHA  HHA   SING  N  N   7  
HDD  CHB  C4A   SING  N  N   8  
HDD  CHB  C1B   DOUB  N  N   9  
HDD  CHB  HHB   SING  N  N  10  
HDD  CHC  C4B   DOUB  N  N  11  
HDD  CHC  C1C   SING  N  N  12  
HDD  CHC  HHC   SING  N  N  13  
HDD  CHD  C4C   SING  N  N  14  
HDD  CHD  C1D   DOUB  N  N  15  
HDD  CHD  HHD   SING  N  N  16  
HDD  NA   C1A   SING  Y  N  17  
HDD  NA   C4A   SING  Y  N  18  
HDD  C1A  C2A   DOUB  Y  N  19  
HDD  C2A  C3A   SING  Y  N  20  
HDD  C2A  CAA   SING  N  N  21  
HDD  C3A  C4A   DOUB  Y  N  22  
HDD  C3A  CMA   SING  N  N  23  
HDD  CMA  HMA1  SING  N  N  24  
HDD  CMA  HMA2  SING  N  N  25  
HDD  CMA  HMA3  SING  N  N  26  
HDD  CAA  CBA   SING  N  N  27  
HDD  CAA  HAA1  SING  N  N  28  
HDD  CAA  HAA2  SING  N  N  29  
HDD  CBA  CGA   SING  N  N  30  
HDD  CBA  HBA1  SING  N  N  31  
HDD  CBA  HBA2  SING  N  N  32  
HDD  CGA  O1A   DOUB  N  N  33  
HDD  CGA  O2A   SING  N  N  34  
HDD  O2A  H2A   SING  N  N  35  
HDD  NB   C1B   SING  Y  N  36  
HDD  NB   C4B   SING  Y  N  37  
HDD  C1B  C2B   SING  Y  N  38  
HDD  C2B  C3B   DOUB  Y  N  39  
HDD  C2B  CMB   SING  N  N  40  
HDD  C3B  C4B   SING  Y  N  41  
HDD  C3B  CAB   SING  N  N  42  
HDD  CMB  HMB1  SING  N  N  43  
HDD  CMB  HMB2  SING  N  N  44  
HDD  CMB  HMB3  SING  N  N  45  
HDD  CAB  CBB   DOUB  N  N  46  
HDD  CAB  HAB   SING  N  N  47  
HDD  CBB  HBB1  SING  N  N  48  
HDD  CBB  HBB2  SING  N  N  49  
HDD  NC   C1C   SING  Y  N  50  
HDD  NC   C4C   SING  Y  N  51  
HDD  C1C  C2C   DOUB  Y  N  52  
HDD  C2C  C3C   SING  Y  N  53  
HDD  C2C  CMC   SING  N  N  54  
HDD  C3C  C4C   DOUB  Y  N  55  
HDD  C3C  CAC   SING  N  N  56  
HDD  CMC  HMC1  SING  N  N  57  
HDD  CMC  HMC2  SING  N  N  58  
HDD  CMC  HMC3  SING  N  N  59  
HDD  CAC  CBC   DOUB  N  N  60  
HDD  CAC  HAC   SING  N  N  61  
HDD  CBC  HBC1  SING  N  N  62  
HDD  CBC  HBC2  SING  N  N  63  
HDD  ND   C1D   SING  N  N  64  
HDD  ND   C4D   SING  N  N  65  
HDD  C1D  C2D   SING  N  N  66  
HDD  C2D  C3D   SING  N  N  67  
HDD  C2D  CMD   SING  N  N  68  
HDD  C2D  OND   SING  N  N  69  
HDD  C3D  C4D   SING  N  N  70  
HDD  C3D  CAD   SING  N  N  71  
HDD  C3D  O1D   SING  N  N  72  
HDD  CMD  HMD1  SING  N  N  73  
HDD  CMD  HMD2  SING  N  N  74  
HDD  CMD  HMD3  SING  N  N  75  
HDD  CAD  CBD   SING  N  N  76  
HDD  CAD  HAD1  SING  N  N  77  
HDD  CAD  HAD2  SING  N  N  78  
HDD  CBD  CGD   SING  N  N  79  
HDD  CBD  HBD1  SING  N  N  80  
HDD  CBD  HBD2  SING  N  N  81  
HDD  CGD  O1D   SING  N  N  82  
HDD  CGD  O2D   DOUB  N  N  83  
HDD  OND  HND   SING  N  N  84  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HDD  SMILES            ACDLabs               10.04  "O=C(O)CCc1c(c2C=C7C(=C(\C=C)C6=Cc5c(c(\C=C)c4C=C9N3C(=Cc1n2[Fe]3(n45)N67)C8(OC(=O)CC8)C9(O)C)C)C)C"  
HDD  SMILES_CANONICAL  CACTVS                3.341  "Cc1c(CCC(O)=O)c2C=C3N4C(=Cc5n6c(C=C7N8C(=Cc1n2[Fe@]468)C(=C7C=C)C)c(C)c5C=C)[C@](C)(O)[C@@]39CCC(=O)O9"  
HDD  SMILES            CACTVS                3.341  "Cc1c(CCC(O)=O)c2C=C3N4C(=Cc5n6c(C=C7N8C(=Cc1n2[Fe]468)C(=C7C=C)C)c(C)c5C=C)[C](C)(O)[C]39CCC(=O)O9"  
HDD  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "Cc1c2n3c(c1CCC(=O)O)C=C4[C@]5(CCC(=O)O5)[C@@](C6=Cc7c(c(c8n7[Fe]3(N64)N9C(=C2)C(=C(C9=C8)C=C)C)C)C=C)(C)O"  
HDD  SMILES            "OpenEye OEToolkits"  1.5.0  "Cc1c2n3c(c1CCC(=O)O)C=C4C5(CCC(=O)O5)C(C6=Cc7c(c(c8n7[Fe]3(N64)N9C(=C2)C(=C(C9=C8)C=C)C)C)C=C)(C)O"  
HDD  InChI             InChI                 1.03   "InChI=1S/C34H32N4O5.Fe/c1-7-20-17(3)23-13-24-19(5)22(9-10-31(39)40)28(37-24)16-30-34(12-11-32(41)43-34)33(6,42)29(38-30)15-27-21(8-2)18(4)25(36-27)14-26(20)35-23;/h7-8,13-16,42H,1-2,9-12H2,3-6H3,(H,39,40);/q-4;+4/b23-13-,26-14-,29-15-,30-16-;/t33-,34+;/m0./s1"  
HDD  InChIKey          InChI                 1.03   UMGOPAWIGKFTRK-QQDQPIDJSA-N  
#
_pdbx_chem_comp_identifier.comp_id          HDD
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  10.04
_pdbx_chem_comp_identifier.identifier       "{3-[(2R,5'S)-9',14'-diethenyl-5'-hydroxy-5',10',15',19'-tetramethyl-5-oxo-4,5-dihydro-3H-spiro[furan-2,4'-[21,22,23,24]tetraazapentacyclo[16.2.1.1~3,6~.1~8,11~.1~13,16~]tetracosa[1(20),2,6,8,10,12,14,16,18]nonaen]-20'-yl-kappa~4~N~21'~,N~22'~,N~23'~,N~24'~]propanoato(4-)}iron"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HDD  "Create component"   2000-08-22  RCSB  
HDD  "Modify descriptor"  2011-06-04  RCSB  
HDD  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     HDD
_pdbx_chem_comp_synonyms.name        HEME
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
