data_F3D
# 
_chem_comp.id                                    F3D 
_chem_comp.name                                  "4-[(2-{4-[(1E)-1-(1H-indazol-5-yl)-2-phenylbut-1-en-1-yl]phenoxy}ethyl)amino]-N,N-dimethylbutanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H36 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-02-26 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        496.643 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     F3D 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6CHZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
F3D C1  C1  C 0 1 N N N N N N -30.969 0.261   -29.281 5.177   -2.507 0.289  C1  F3D 1  
F3D N1  N1  N 0 1 N N N N N N -33.150 -8.506  -15.907 -10.354 0.034  -0.087 N1  F3D 2  
F3D C2  C2  C 0 1 N N N N N N -31.642 -0.152  -27.971 3.782   -1.984 0.061  C2  F3D 3  
F3D N2  N2  N 0 1 Y N N N N N -25.346 -1.742  -26.852 7.906   2.886  -0.498 N2  F3D 4  
F3D C3  C3  C 0 1 N N N N N N -30.912 -0.988  -26.965 3.583   -0.663 -0.170 C3  F3D 5  
F3D C4  C4  C 0 1 Y N N N N N -31.576 -1.571  -25.821 2.208   -0.129 -0.276 C4  F3D 6  
F3D C5  C5  C 0 1 Y N N N N N -32.716 -2.337  -26.013 1.377   -0.536 -1.321 C5  F3D 7  
F3D O1  O1  O 0 1 N N N N N N -32.854 -6.268  -16.506 -8.543  -1.153 0.397  O1  F3D 8  
F3D C6  C6  C 0 1 Y N N N N N -33.346 -2.941  -24.953 0.096   -0.037 -1.416 C6  F3D 9  
F3D C7  C7  C 0 1 Y N N N N N -32.931 -2.828  -23.606 -0.369  0.870  -0.473 C7  F3D 10 
F3D C8  C8  C 0 1 N N N N N N -33.968 -2.912  -21.319 -2.047  2.288  0.434  C8  F3D 11 
F3D C9  C9  C 0 1 N N N N N N -33.880 -3.971  -20.201 -3.488  2.725  0.161  C9  F3D 12 
F3D C10 C10 C 0 1 N N N N N N -34.922 -6.016  -19.257 -5.780  1.954  0.051  C10 F3D 13 
F3D C11 C11 C 0 1 N N N N N N -35.353 -5.877  -17.770 -6.683  0.729  0.210  C11 F3D 14 
F3D C12 C12 C 0 1 N N N N N N -35.049 -7.181  -16.963 -8.136  1.127  -0.056 C12 F3D 15 
F3D C13 C13 C 0 1 N N N N N N -33.572 -7.280  -16.439 -9.025  -0.080 0.101  C13 F3D 16 
F3D C14 C14 C 0 1 N N N N N N -31.757 -8.670  -15.418 -10.936 1.330  -0.444 C14 F3D 17 
F3D C15 C15 C 0 1 N N N N N N -34.052 -9.678  -15.845 -11.218 -1.139 0.066  C15 F3D 18 
F3D N   N3  N 0 1 N N N N N N -35.113 -4.767  -20.077 -4.385  1.571  0.306  N   F3D 19 
F3D O   O2  O 0 1 N N N N N N -33.628 -3.438  -22.615 -1.633  1.359  -0.569 O   F3D 20 
F3D C16 C16 C 0 1 Y N N N N N -31.808 -2.034  -23.361 0.454   1.277  0.569  C16 F3D 21 
F3D C17 C17 C 0 1 Y N N N N N -31.193 -1.439  -24.491 1.734   0.779  0.674  C17 F3D 22 
F3D C   C18 C 0 1 N N N N N N -30.637 1.765   -29.329 5.459   -2.569 1.791  C   F3D 23 
F3D C25 C19 C 0 1 Y N N N N N -32.998 0.213   -27.849 2.637   -2.906 0.090  C25 F3D 24 
F3D C30 C20 C 0 1 Y N N N N N -33.365 0.936   -26.711 2.517   -3.908 -0.878 C30 F3D 25 
F3D C29 C21 C 0 1 Y N N N N N -34.690 1.361   -26.567 1.440   -4.768 -0.844 C29 F3D 26 
F3D C28 C22 C 0 1 Y N N N N N -35.675 1.129   -27.541 0.479   -4.642 0.144  C28 F3D 27 
F3D C27 C23 C 0 1 Y N N N N N -35.325 0.411   -28.672 0.590   -3.652 1.105  C27 F3D 28 
F3D C26 C24 C 0 1 Y N N N N N -33.978 -0.006  -28.824 1.665   -2.788 1.089  C26 F3D 29 
F3D C18 C25 C 0 1 Y N N N N N -29.505 -1.235  -27.034 4.742   0.245  -0.317 C18 F3D 30 
F3D C24 C26 C 0 1 Y N N N N N -28.537 -0.271  -27.221 4.996   1.207  0.652  C24 F3D 31 
F3D C23 C27 C 0 1 Y N N N N N -27.228 -0.570  -27.214 6.093   2.059  0.503  C23 F3D 32 
F3D C22 C28 C 0 1 Y N N N N N -26.193 0.220   -27.386 6.643   3.151  1.302  C22 F3D 33 
F3D N3  N4  N 0 1 Y N N N N N -25.057 -0.443  -27.233 7.695   3.605  0.683  N3  F3D 34 
F3D C21 C29 C 0 1 Y N N N N N -26.714 -1.801  -26.875 6.928   1.934  -0.625 C21 F3D 35 
F3D C20 C30 C 0 1 Y N N N N N -27.612 -2.770  -26.637 6.654   0.961  -1.585 C20 F3D 36 
F3D C19 C31 C 0 1 Y N N N N N -28.975 -2.498  -26.666 5.582   0.133  -1.434 C19 F3D 37 
F3D H1  H1  H 0 1 N N N N N N -31.646 0.023   -30.115 5.264   -3.506 -0.139 H1  F3D 38 
F3D H2  H2  H 0 1 N N N N N N -30.035 -0.310  -29.392 5.897   -1.843 -0.189 H2  F3D 39 
F3D H3  H3  H 0 1 N N N N N N -24.703 -2.470  -26.614 8.627   3.039  -1.128 H3  F3D 40 
F3D H4  H4  H 0 1 N N N N N N -33.114 -2.460  -27.010 1.739   -1.241 -2.056 H4  F3D 41 
F3D H5  H5  H 0 1 N N N N N N -34.218 -3.543  -25.162 -0.547  -0.351 -2.225 H5  F3D 42 
F3D H6  H6  H 0 1 N N N N N N -33.276 -2.091  -21.080 -1.393  3.160  0.415  H6  F3D 43 
F3D H7  H7  H 0 1 N N N N N N -34.997 -2.525  -21.356 -1.991  1.814  1.414  H7  F3D 44 
F3D H8  H8  H 0 1 N N N N N N -33.043 -4.650  -20.424 -3.774  3.499  0.873  H8  F3D 45 
F3D H9  H9  H 0 1 N N N N N N -33.693 -3.460  -19.245 -3.562  3.119  -0.852 H9  F3D 46 
F3D H10 H10 H 0 1 N N N N N N -35.515 -6.822  -19.714 -5.871  2.342  -0.964 H10 F3D 47 
F3D H11 H11 H 0 1 N N N N N N -33.856 -6.285  -19.283 -6.082  2.723  0.762  H11 F3D 48 
F3D H12 H12 H 0 1 N N N N N N -34.805 -5.039  -17.315 -6.381  -0.040 -0.501 H12 F3D 49 
F3D H13 H13 H 0 1 N N N N N N -36.433 -5.674  -17.728 -6.592  0.340  1.225  H13 F3D 50 
F3D H14 H14 H 0 1 N N N N N N -35.726 -7.217  -16.097 -8.438  1.896  0.655  H14 F3D 51 
F3D H15 H15 H 0 1 N N N N N N -35.243 -8.045  -17.616 -8.226  1.515  -1.071 H15 F3D 52 
F3D H16 H16 H 0 1 N N N N N N -31.618 -9.694  -15.041 -12.015 1.226  -0.553 H16 F3D 53 
F3D H17 H17 H 0 1 N N N N N N -31.054 -8.486  -16.244 -10.718 2.055  0.341  H17 F3D 54 
F3D H18 H18 H 0 1 N N N N N N -31.566 -7.952  -14.607 -10.507 1.674  -1.385 H18 F3D 55 
F3D H19 H19 H 0 1 N N N N N N -33.519 -10.528 -15.394 -11.311 -1.650 -0.892 H19 F3D 56 
F3D H20 H20 H 0 1 N N N N N N -34.932 -9.431  -15.233 -10.783 -1.818 0.799  H20 F3D 57 
F3D H21 H21 H 0 1 N N N N N N -34.375 -9.946  -16.862 -12.205 -0.823 0.405  H21 F3D 58 
F3D H22 H22 H 0 1 N N N N N N -35.815 -4.203  -19.642 -4.102  0.814  -0.298 H22 F3D 59 
F3D H24 H24 H 0 1 N N N N N N -31.428 -1.881  -22.362 0.088   1.983  1.301  H24 F3D 60 
F3D H25 H25 H 0 1 N N N N N N -30.333 -0.815  -24.298 2.372   1.093  1.487  H25 F3D 61 
F3D H26 H26 H 0 1 N N N N N N -30.157 2.005   -30.289 5.286   -1.589 2.234  H26 F3D 62 
F3D H27 H27 H 0 1 N N N N N N -31.564 2.348   -29.227 4.797   -3.300 2.255  H27 F3D 63 
F3D H28 H28 H 0 1 N N N N N N -29.953 2.016   -28.505 6.496   -2.864 1.954  H28 F3D 64 
F3D H29 H29 H 0 1 N N N N N N -32.633 1.164   -25.950 3.265   -4.008 -1.650 H29 F3D 65 
F3D H30 H30 H 0 1 N N N N N N -34.968 1.891   -25.668 1.345   -5.543 -1.591 H30 F3D 66 
F3D H31 H31 H 0 1 N N N N N N -36.680 1.501   -27.411 -0.363  -5.319 0.165  H31 F3D 67 
F3D H32 H32 H 0 1 N N N N N N -36.063 0.173   -29.424 -0.164  -3.560 1.873  H32 F3D 68 
F3D H33 H33 H 0 1 N N N N N N -33.696 -0.516  -29.733 1.750   -2.017 1.840  H33 F3D 69 
F3D H34 H34 H 0 1 N N N N N N -28.840 0.754   -27.378 4.351   1.295  1.514  H34 F3D 70 
F3D H35 H35 H 0 1 N N N N N N -26.260 1.272   -27.621 6.246   3.518  2.237  H35 F3D 71 
F3D H36 H36 H 0 1 N N N N N N -27.272 -3.772  -26.421 7.292   0.864  -2.451 H36 F3D 72 
F3D H37 H37 H 0 1 N N N N N N -29.663 -3.286  -26.396 5.377   -0.618 -2.182 H37 F3D 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
F3D C   C1  SING N N 1  
F3D C1  C2  SING N N 2  
F3D C26 C27 DOUB Y N 3  
F3D C26 C25 SING Y N 4  
F3D C27 C28 SING Y N 5  
F3D C2  C25 SING N N 6  
F3D C2  C3  DOUB N E 7  
F3D C25 C30 DOUB Y N 8  
F3D C28 C29 DOUB Y N 9  
F3D C22 N3  DOUB Y N 10 
F3D C22 C23 SING Y N 11 
F3D N3  N2  SING Y N 12 
F3D C24 C23 DOUB Y N 13 
F3D C24 C18 SING Y N 14 
F3D C23 C21 SING Y N 15 
F3D C18 C3  SING N N 16 
F3D C18 C19 DOUB Y N 17 
F3D C3  C4  SING N N 18 
F3D C21 N2  SING Y N 19 
F3D C21 C20 DOUB Y N 20 
F3D C30 C29 SING Y N 21 
F3D C19 C20 SING Y N 22 
F3D C5  C4  DOUB Y N 23 
F3D C5  C6  SING Y N 24 
F3D C4  C17 SING Y N 25 
F3D C6  C7  DOUB Y N 26 
F3D C17 C16 DOUB Y N 27 
F3D C7  C16 SING Y N 28 
F3D C7  O   SING N N 29 
F3D O   C8  SING N N 30 
F3D C8  C9  SING N N 31 
F3D C9  N   SING N N 32 
F3D N   C10 SING N N 33 
F3D C10 C11 SING N N 34 
F3D C11 C12 SING N N 35 
F3D C12 C13 SING N N 36 
F3D O1  C13 DOUB N N 37 
F3D C13 N1  SING N N 38 
F3D N1  C15 SING N N 39 
F3D N1  C14 SING N N 40 
F3D C1  H1  SING N N 41 
F3D C1  H2  SING N N 42 
F3D N2  H3  SING N N 43 
F3D C5  H4  SING N N 44 
F3D C6  H5  SING N N 45 
F3D C8  H6  SING N N 46 
F3D C8  H7  SING N N 47 
F3D C9  H8  SING N N 48 
F3D C9  H9  SING N N 49 
F3D C10 H10 SING N N 50 
F3D C10 H11 SING N N 51 
F3D C11 H12 SING N N 52 
F3D C11 H13 SING N N 53 
F3D C12 H14 SING N N 54 
F3D C12 H15 SING N N 55 
F3D C14 H16 SING N N 56 
F3D C14 H17 SING N N 57 
F3D C14 H18 SING N N 58 
F3D C15 H19 SING N N 59 
F3D C15 H20 SING N N 60 
F3D C15 H21 SING N N 61 
F3D N   H22 SING N N 62 
F3D C16 H24 SING N N 63 
F3D C17 H25 SING N N 64 
F3D C   H26 SING N N 65 
F3D C   H27 SING N N 66 
F3D C   H28 SING N N 67 
F3D C30 H29 SING N N 68 
F3D C29 H30 SING N N 69 
F3D C28 H31 SING N N 70 
F3D C27 H32 SING N N 71 
F3D C26 H33 SING N N 72 
F3D C24 H34 SING N N 73 
F3D C22 H35 SING N N 74 
F3D C20 H36 SING N N 75 
F3D C19 H37 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
F3D SMILES           ACDLabs              12.01 "C(/C(c1ccccc1)=C(/c2ccc(cc2)OCCNCCCC(N(C)C)=O)c3ccc4nncc4c3)C"                                                                                                                                           
F3D InChI            InChI                1.03  "InChI=1S/C31H36N4O2/c1-4-28(23-9-6-5-7-10-23)31(25-14-17-29-26(21-25)22-33-34-29)24-12-15-27(16-13-24)37-20-19-32-18-8-11-30(36)35(2)3/h5-7,9-10,12-17,21-22,32H,4,8,11,18-20H2,1-3H3,(H,33,34)/b31-28+" 
F3D InChIKey         InChI                1.03  MWRRXSSGLMVYRJ-CCFHIKDMSA-N                                                                                                                                                                               
F3D SMILES_CANONICAL CACTVS               3.385 "CC\C(c1ccccc1)=C(\c2ccc(OCCNCCCC(=O)N(C)C)cc2)c3ccc4[nH]ncc4c3"                                                                                                                                          
F3D SMILES           CACTVS               3.385 "CCC(c1ccccc1)=C(c2ccc(OCCNCCCC(=O)N(C)C)cc2)c3ccc4[nH]ncc4c3"                                                                                                                                            
F3D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC/C(=C(/c1ccc(cc1)OCCNCCCC(=O)N(C)C)\c2ccc3c(c2)cn[nH]3)/c4ccccc4"                                                                                                                                      
F3D SMILES           "OpenEye OEToolkits" 2.0.6 "CCC(=C(c1ccc(cc1)OCCNCCCC(=O)N(C)C)c2ccc3c(c2)cn[nH]3)c4ccccc4"                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
F3D "SYSTEMATIC NAME" ACDLabs              12.01 "4-[(2-{4-[(1E)-1-(1H-indazol-5-yl)-2-phenylbut-1-en-1-yl]phenoxy}ethyl)amino]-N,N-dimethylbutanamide"         
F3D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[2-[4-[(~{E})-1-(1~{H}-indazol-5-yl)-2-phenyl-but-1-enyl]phenoxy]ethylamino]-~{N},~{N}-dimethyl-butanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
F3D "Create component" 2018-02-26 RCSB 
F3D "Initial release"  2018-03-21 RCSB 
F3D "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            F3D 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C11 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
