data_B0D
#

_chem_comp.id                                   B0D
_chem_comp.name                                 "(2R,3S,4R,5R,6R)-2,6-difluoro-2-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol"
_chem_comp.type                                 L-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H10 F2 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-08-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       200.137
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    B0D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3IJ8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
B0D  F1   F1    F  0  1  N  N  N  2.957  -0.207  55.116  -2.430  -1.712  -0.130  F1   B0D   1  
B0D  F2   F2    F  0  1  N  N  N  5.331   2.970  56.709   1.156  -0.655   1.451  F2   B0D   2  
B0D  C1   CX1   C  0  1  N  N  R  3.670   0.697  54.317  -1.395  -0.895   0.339  C1   B0D   3  
B0D  C2   CX2   C  0  1  N  N  R  4.957   0.050  53.712  -1.744   0.572   0.075  C2   B0D   4  
B0D  O2   OX2   O  0  1  N  N  N  4.627  -1.150  53.022  -1.967   0.767  -1.322  O2   B0D   5  
B0D  C3   CX3   C  0  1  N  N  R  6.014  -0.213  54.830  -0.581   1.457   0.536  C3   B0D   6  
B0D  O3   OX3   O  0  1  N  N  N  7.209  -0.800  54.269  -0.399   1.311   1.946  O3   B0D   7  
B0D  C4   CX4   C  0  1  N  N  S  6.351   1.130  55.531   0.695   1.023  -0.192  C4   B0D   8  
B0D  O4   OX4   O  0  1  N  N  N  7.344   0.942  56.571   0.536   1.229  -1.597  O4   B0D   9  
B0D  C5   CX5   C  0  1  N  N  R  5.060   1.763  56.133   0.950  -0.462   0.081  C5   B0D  10  
B0D  O5   OX5   O  0  1  N  N  N  4.046   1.916  55.063  -0.183  -1.224  -0.342  O5   B0D  11  
B0D  C6   CX6   C  0  1  N  N  N  4.517   0.878  57.307   2.190  -0.917  -0.691  C6   B0D  12  
B0D  O6   OX6   O  0  1  N  N  N  3.219   1.359  57.709   3.321  -0.154  -0.268  O6   B0D  13  
B0D  H1   HX1   H  0  1  N  N  N  2.991   0.976  53.497  -1.265  -1.051   1.410  H1   B0D  14  
B0D  H2   HX2   H  0  1  N  N  N  5.400   0.750  52.988  -2.645   0.837   0.628  H2   B0D  15  
B0D  HO2  HOX2  H  0  1  N  Y  N  5.416  -1.534  52.659  -2.688   0.233  -1.684  HO2  B0D  16  
B0D  H3   HX3   H  0  1  N  N  N  5.601  -0.919  55.565  -0.800   2.498   0.302  H3   B0D  17  
B0D  HO3  HOX3  H  0  1  N  Y  N  7.842  -0.954  54.961  -1.173   1.562   2.470  HO3  B0D  18  
B0D  H4   HX4   H  0  1  N  N  N  6.769   1.812  54.776   1.538   1.611   0.169  H4   B0D  19  
B0D  HO4  HOX4  H  0  1  N  Y  N  7.533   1.777  56.984   0.366   2.149  -1.843  HO4  B0D  20  
B0D  H61  HX6   H  0  1  N  N  N  4.434  -0.166  56.971   2.371  -1.974  -0.497  H61  B0D  21  
B0D  H62  HX6A  H  0  1  N  N  N  5.210   0.934  58.160   2.028  -0.767  -1.759  H62  B0D  22  
B0D  HO6  HOX6  H  0  1  N  Y  N  2.889   0.823  58.421   4.145  -0.390  -0.717  HO6  B0D  23  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
B0D  F1  C1   SING  N  N   1  
B0D  F2  C5   SING  N  N   2  
B0D  C1  C2   SING  N  N   3  
B0D  C1  O5   SING  N  N   4  
B0D  C2  O2   SING  N  N   5  
B0D  C2  C3   SING  N  N   6  
B0D  C3  O3   SING  N  N   7  
B0D  C3  C4   SING  N  N   8  
B0D  C4  O4   SING  N  N   9  
B0D  C4  C5   SING  N  N  10  
B0D  C5  O5   SING  N  N  11  
B0D  C5  C6   SING  N  N  12  
B0D  C6  O6   SING  N  N  13  
B0D  C1  H1   SING  N  N  14  
B0D  C2  H2   SING  N  N  15  
B0D  O2  HO2  SING  N  N  16  
B0D  C3  H3   SING  N  N  17  
B0D  O3  HO3  SING  N  N  18  
B0D  C4  H4   SING  N  N  19  
B0D  O4  HO4  SING  N  N  20  
B0D  C6  H61  SING  N  N  21  
B0D  C6  H62  SING  N  N  22  
B0D  O6  HO6  SING  N  N  23  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
B0D  SMILES            ACDLabs               11.02  "FC1OC(F)(C(O)C(O)C1O)CO"  
B0D  SMILES_CANONICAL  CACTVS                3.352  "OC[C@]1(F)O[C@H](F)[C@H](O)[C@@H](O)[C@@H]1O"  
B0D  SMILES            CACTVS                3.352  "OC[C]1(F)O[CH](F)[CH](O)[CH](O)[CH]1O"  
B0D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C([C@]1([C@H]([C@@H]([C@H]([C@H](O1)F)O)O)O)F)O"  
B0D  SMILES            "OpenEye OEToolkits"  1.7.0  "C(C1(C(C(C(C(O1)F)O)O)O)F)O"  
B0D  InChI             InChI                 1.03   "InChI=1S/C6H10F2O5/c7-5-3(11)2(10)4(12)6(8,1-9)13-5/h2-5,9-12H,1H2/t2-,3-,4+,5+,6+/m1/s1"  
B0D  InChIKey          InChI                 1.03   MGHYRMVVRYCAON-PQMKYFCFSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
B0D  "SYSTEMATIC NAME"  ACDLabs               11.02  "(2R,3S,4R,5R,6R)-2,6-difluoro-2-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol (non-preferred name)"  
B0D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "(2R,3S,4R,5R,6R)-2,6-difluoro-2-(hydroxymethyl)oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
B0D  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
B0D  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
B0D  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
B0D  "Create component"          2009-08-18  RCSB  
B0D  "Modify descriptor"         2011-06-04  RCSB  
B0D  "Other modification"        2020-07-03  RCSB  
B0D  "Modify linking type"       2020-07-17  RCSB  
B0D  "Modify atom id"            2020-07-17  RCSB  
B0D  "Modify component atom id"  2020-07-17  RCSB  
B0D  "Modify leaving atom flag"  2020-07-17  RCSB  
##
