data_9SD
#

_chem_comp.id                                   9SD
_chem_comp.name                                 "(2~{R},3~{R},4~{R},5~{R})-3-acetamido-2-[(1~{R})-1,3-bis(oxidanyl)propyl]-5-fluoranyl-4-oxidanyl-2,3,4,5-tetrahydropyran-1-ium-6-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H17 F N O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2017-06-07
_chem_comp.pdbx_modified_date                   2020-01-26
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       294.254
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9SD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5W2W
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9SD  O1B  O1   O  0  1  N  N  N  24.073  20.848  64.676   1.465  -3.928  -0.104  O1B  9SD   1  
9SD  C1   C1   C  0  1  N  N  N  23.453  19.778  64.522   1.790  -2.778   0.102  C1   9SD   2  
9SD  O1A  O2   O  0  1  N  N  N  22.278  19.615  64.914   3.093  -2.449   0.170  O1A  9SD   3  
9SD  C2   C2   C  0  1  N  N  N  24.094  18.818  63.862   0.746  -1.728   0.274  C2   9SD   4  
9SD  C3   C3   C  0  1  N  N  R  23.453  17.490  63.604  -0.680  -2.178   0.178  C3   9SD   5  
9SD  F1   F1   F  0  1  N  N  N  23.515  16.836  64.805  -1.004  -2.415  -1.162  F1   9SD   6  
9SD  C4   C4   C  0  1  N  N  R  24.176  16.649  62.550  -1.606  -1.094   0.742  C4   9SD   7  
9SD  O6   O3   O  1  1  N  N  N  25.443  19.106  63.439   1.129  -0.632   0.477  O6   9SD   8  
9SD  C6   C5   C  0  1  N  N  R  25.997  18.285  62.395   0.283   0.513   0.691  C6   9SD   9  
9SD  C7   C6   C  0  1  N  N  R  27.504  18.551  62.368   0.873   1.715  -0.049  C7   9SD  10  
9SD  C8   C7   C  0  1  N  N  N  27.797  19.964  61.896   2.333   1.903   0.367  C8   9SD  11  
9SD  C9   C8   C  0  1  N  N  N  29.240  20.367  62.214   2.887   3.177  -0.275  C9   9SD  12  
9SD  O9   O4   O  0  1  N  N  N  30.086  19.485  61.461   4.251   3.353   0.113  O9   9SD  13  
9SD  O7   O5   O  0  1  N  N  N  28.012  18.402  63.698   0.805   1.488  -1.458  O7   9SD  14  
9SD  C5   C9   C  0  1  N  N  R  25.673  16.826  62.668  -1.136   0.255   0.178  C5   9SD  15  
9SD  N5   N1   N  0  1  N  N  N  26.183  16.059  61.524  -2.028   1.322   0.638  N5   9SD  16  
9SD  C10  C10  C  0  1  N  N  N  26.856  14.925  61.724  -3.165   1.586  -0.036  C10  9SD  17  
9SD  O10  O6   O  0  1  N  N  N  27.089  14.519  62.857  -3.450   0.941  -1.023  O10  9SD  18  
9SD  C11  C11  C  0  1  N  N  N  27.324  14.197  60.488  -4.083   2.684   0.438  C11  9SD  19  
9SD  O4   O7   O  0  1  N  N  N  23.853  15.281  62.776  -2.953  -1.347   0.336  O4   9SD  20  
9SD  H1   H1   H  0  1  N  N  N  21.968  20.413  65.326   3.733  -3.163   0.048  H1   9SD  21  
9SD  H3   H3   H  0  1  N  N  N  22.411  17.643  63.286  -0.810  -3.097   0.750  H3   9SD  22  
9SD  H4   H4   H  0  1  N  N  N  23.848  16.965  61.549  -1.543  -1.083   1.830  H4   9SD  23  
9SD  H5   H5   H  0  1  N  N  N  25.569  18.571  61.423   0.243   0.735   1.757  H5   9SD  24  
9SD  H6   H6   H  0  1  N  N  N  27.985  17.833  61.688   0.305   2.611   0.203  H6   9SD  25  
9SD  H7   H7   H  0  1  N  N  N  27.111  20.660  62.400   2.394   1.988   1.452  H7   9SD  26  
9SD  H8   H8   H  0  1  N  N  N  27.641  20.019  60.809   2.919   1.046   0.037  H8   9SD  27  
9SD  H9   H9   H  0  1  N  N  N  29.437  20.255  63.290   2.826   3.092  -1.360  H9   9SD  28  
9SD  H10  H10  H  0  1  N  N  N  29.418  21.411  61.915   2.301   4.035   0.055  H10  9SD  29  
9SD  H11  H11  H  0  1  N  N  N  30.996  19.699  61.628   4.667   4.143  -0.259  H11  9SD  30  
9SD  H12  H12  H  0  1  N  N  N  27.836  17.521  64.008   1.289   0.705  -1.754  H12  9SD  31  
9SD  H13  H13  H  0  1  N  N  N  26.066  16.480  63.635  -1.136   0.218  -0.912  H13  9SD  32  
9SD  H14  H14  H  0  1  N  N  N  26.025  16.388  60.593  -1.801   1.837   1.427  H14  9SD  33  
9SD  H15  H15  H  0  1  N  N  N  27.877  13.293  60.782  -3.665   3.147   1.331  H15  9SD  34  
9SD  H16  H16  H  0  1  N  N  N  26.454  13.912  59.879  -4.187   3.434  -0.346  H16  9SD  35  
9SD  H17  H17  H  0  1  N  N  N  27.982  14.855  59.902  -5.062   2.264   0.670  H17  9SD  36  
9SD  H18  H18  H  0  1  N  N  N  22.913  15.161  62.704  -3.310  -2.185   0.660  H18  9SD  37  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9SD  C11  C10  SING  N  N   1  
9SD  O9   C9   SING  N  N   2  
9SD  N5   C10  SING  N  N   3  
9SD  N5   C5   SING  N  N   4  
9SD  C10  O10  DOUB  N  N   5  
9SD  C8   C9   SING  N  N   6  
9SD  C8   C7   SING  N  N   7  
9SD  C7   C6   SING  N  N   8  
9SD  C7   O7   SING  N  N   9  
9SD  C6   C5   SING  N  N  10  
9SD  C6   O6   SING  N  N  11  
9SD  C4   C5   SING  N  N  12  
9SD  C4   O4   SING  N  N  13  
9SD  C4   C3   SING  N  N  14  
9SD  O6   C2   DOUB  N  N  15  
9SD  C3   C2   SING  N  N  16  
9SD  C3   F1   SING  N  N  17  
9SD  C2   C1   SING  N  N  18  
9SD  C1   O1B  DOUB  N  N  19  
9SD  C1   O1A  SING  N  N  20  
9SD  O1A  H1   SING  N  N  21  
9SD  C3   H3   SING  N  N  22  
9SD  C4   H4   SING  N  N  23  
9SD  C6   H5   SING  N  N  24  
9SD  C7   H6   SING  N  N  25  
9SD  C8   H7   SING  N  N  26  
9SD  C8   H8   SING  N  N  27  
9SD  C9   H9   SING  N  N  28  
9SD  C9   H10  SING  N  N  29  
9SD  O9   H11  SING  N  N  30  
9SD  O7   H12  SING  N  N  31  
9SD  C5   H13  SING  N  N  32  
9SD  N5   H14  SING  N  N  33  
9SD  C11  H15  SING  N  N  34  
9SD  C11  H16  SING  N  N  35  
9SD  C11  H17  SING  N  N  36  
9SD  O4   H18  SING  N  N  37  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9SD  SMILES            ACDLabs               12.01  "O=C(O)C=1C(F)C(C(C([O+]=1)C(O)CCO)NC(=O)C)O"  
9SD  InChI             InChI                 1.03   "InChI=1S/C11H16FNO7/c1-4(15)13-7-8(17)6(12)10(11(18)19)20-9(7)5(16)2-3-14/h5-9,14,16-17H,2-3H2,1H3,(H-,13,15,18,19)/p+1/t5-,6-,7-,8+,9+/m1/s1"  
9SD  InChIKey          InChI                 1.03   CHPKCUSAUNABPC-HXLXBVJFSA-O  
9SD  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)N[C@@H]1[C@@H](O)[C@@H](F)C(=[O+][C@H]1[C@H](O)CCO)C(O)=O"  
9SD  SMILES            CACTVS                3.385  "CC(=O)N[CH]1[CH](O)[CH](F)C(=[O+][CH]1[CH](O)CCO)C(O)=O"  
9SD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CC(=O)N[C@@H]1[C@H]([C@H](C(=[O+][C@H]1[C@@H](CCO)O)C(=O)O)F)O"  
9SD  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(=O)NC1C(C(C(=[O+]C1C(CCO)O)C(=O)O)F)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9SD  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R,3R,4R,5R)-3-(acetylamino)-6-carboxy-2-[(1R)-1,3-dihydroxypropyl]-5-fluoro-4-hydroxy-2,3,4,5-tetrahydropyranium (non-preferred name)"  
9SD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(2~{R},3~{R},4~{R},5~{R})-3-acetamido-2-[(1~{R})-1,3-bis(oxidanyl)propyl]-5-fluoranyl-4-oxidanyl-2,3,4,5-tetrahydropyran-1-ium-6-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9SD  "Create component"    2017-06-07  RCSB  
9SD  "Modify formula"      2017-06-13  RCSB  
9SD  "Initial release"     2018-02-21  RCSB  
9SD  "Other modification"  2020-01-26  RCSB  
##
