data_9JD
# 
_chem_comp.id                                    9JD 
_chem_comp.name                                  
;methyl [(4S)-4-{(3R)-1-[(3S)-4-amino-3-hydroxybutanoyl]piperidin-3-yl}-4-(3'-ethyl-6-fluoro[1,1'-biphenyl]-2-yl)-4-hydroxybutyl]carbamate
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H40 F N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-15 
_chem_comp.pdbx_modified_date                    2017-10-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        529.643 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9JD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5VRP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9JD C10 C1  C 0 1 Y N N 21.728 40.850 14.548 1.016   -1.714 2.860  C10 9JD 1  
9JD C12 C2  C 0 1 Y N N 21.475 41.125 15.864 1.272   -0.845 3.905  C12 9JD 2  
9JD C13 C3  C 0 1 Y N N 22.541 41.472 16.672 1.270   0.520  3.688  C13 9JD 3  
9JD C14 C4  C 0 1 Y N N 23.825 41.537 16.155 1.014   1.025  2.426  C14 9JD 4  
9JD C15 C5  C 0 1 Y N N 24.078 41.247 14.817 0.758   0.168  1.375  C15 9JD 5  
9JD C16 C6  C 0 1 N N S 25.522 41.343 14.272 0.479   0.721  0.001  C16 9JD 6  
9JD C18 C7  C 0 1 N N N 25.813 42.660 13.518 1.554   1.748  -0.363 C18 9JD 7  
9JD C19 C8  C 0 1 N N N 24.844 43.821 13.778 2.921   1.062  -0.409 C19 9JD 8  
9JD N21 N1  N 0 1 N N N 26.390 45.271 12.525 5.303   1.431  -0.817 N21 9JD 9  
9JD O23 O1  O 0 1 N N N 26.255 47.356 13.388 6.315   3.333  -1.356 O23 9JD 10 
9JD O24 O2  O 0 1 N N N 28.243 46.401 12.914 7.609   1.541  -1.161 O24 9JD 11 
9JD C01 C9  C 0 1 N N N 23.122 43.054 8.752  2.678   -5.691 -1.234 C01 9JD 12 
9JD C02 C10 C 0 1 N N N 24.247 42.299 9.357  2.410   -4.352 -1.924 C02 9JD 13 
9JD C03 C11 C 0 1 Y N N 23.783 41.260 10.283 1.274   -3.647 -1.230 C03 9JD 14 
9JD C04 C12 C 0 1 Y N N 23.506 39.980 9.833  -0.028  -3.863 -1.643 C04 9JD 15 
9JD C05 C13 C 0 1 Y N N 23.069 39.004 10.709 -1.076  -3.218 -1.009 C05 9JD 16 
9JD C06 C14 C 0 1 Y N N 22.900 39.296 12.050 -0.826  -2.356 0.039  C06 9JD 17 
9JD C07 C15 C 0 1 Y N N 23.159 40.576 12.530 0.484   -2.135 0.459  C07 9JD 18 
9JD C08 C16 C 0 1 Y N N 23.600 41.544 11.631 1.535   -2.791 -0.179 C08 9JD 19 
9JD C09 C17 C 0 1 Y N N 22.991 40.901 13.979 0.758   -1.209 1.586  C09 9JD 20 
9JD F11 F1  F 0 1 N N N 20.691 40.510 13.749 1.023   -3.048 3.072  F11 9JD 21 
9JD O17 O3  O 0 1 N N N 26.424 41.275 15.380 0.495   -0.342 -0.953 O17 9JD 22 
9JD C20 C18 C 0 1 N N N 24.999 44.919 12.749 3.995   2.089  -0.773 C20 9JD 23 
9JD C22 C19 C 0 1 N N N 26.907 46.420 12.977 6.406   2.145  -1.120 C22 9JD 24 
9JD C25 C20 C 0 1 N N N 28.906 47.615 13.341 8.752   2.371  -1.493 C25 9JD 25 
9JD C26 C21 C 0 1 N N R 26.018 39.982 13.572 -0.894  1.395  -0.009 C26 9JD 26 
9JD C28 C22 C 0 1 N N N 25.999 38.739 14.467 -0.904  2.550  0.996  C28 9JD 27 
9JD C29 C23 C 0 1 N N N 26.535 37.504 13.742 -2.267  3.245  0.964  C29 9JD 28 
9JD C30 C24 C 0 1 N N N 27.870 37.797 13.083 -3.355  2.245  1.366  C30 9JD 29 
9JD N31 N2  N 0 1 N N N 27.795 39.023 12.281 -3.259  1.066  0.495  N31 9JD 30 
9JD C32 C25 C 0 1 N N N 27.372 40.158 13.099 -1.967  0.375  0.382  C32 9JD 31 
9JD C33 C26 C 0 1 N N N 28.074 39.063 10.958 -4.335  0.626  -0.187 C33 9JD 32 
9JD O34 O4  O 0 1 N N N 28.418 38.061 10.351 -4.242  -0.349 -0.902 O34 9JD 33 
9JD C35 C27 C 0 1 N N N 27.951 40.388 10.228 -5.653  1.345  -0.061 C35 9JD 34 
9JD C36 C28 C 0 1 N N S 28.759 40.401 8.941  -6.700  0.648  -0.931 C36 9JD 35 
9JD O38 O5  O 0 1 N N N 30.125 40.659 9.265  -6.334  0.769  -2.306 O38 9JD 36 
9JD C39 C29 C 0 1 N N N 28.334 41.592 8.040  -8.066  1.301  -0.707 C39 9JD 37 
9JD N40 N3  N 0 1 N N N 27.601 41.214 6.834  -9.092  0.556  -1.449 N40 9JD 38 
9JD H1  H1  H 0 1 N N N 20.472 41.072 16.260 1.472   -1.234 4.893  H1  9JD 39 
9JD H2  H2  H 0 1 N N N 22.372 41.694 17.715 1.470   1.196  4.507  H2  9JD 40 
9JD H3  H3  H 0 1 N N N 24.644 41.817 16.801 1.014   2.093  2.262  H3  9JD 41 
9JD H4  H4  H 0 1 N N N 25.792 42.441 12.440 1.330   2.178  -1.340 H4  9JD 42 
9JD H5  H5  H 0 1 N N N 26.821 42.994 13.804 1.570   2.539  0.387  H5  9JD 43 
9JD H6  H6  H 0 1 N N N 25.045 44.237 14.776 3.144   0.632  0.567  H6  9JD 44 
9JD H7  H7  H 0 1 N N N 23.813 43.440 13.741 2.905   0.271  -1.159 H7  9JD 45 
9JD H8  H8  H 0 1 N N N 26.977 44.638 12.020 5.376   0.483  -0.629 H8  9JD 46 
9JD H9  H9  H 0 1 N N N 23.519 43.819 8.068  3.499   -6.201 -1.737 H9  9JD 47 
9JD H10 H10 H 0 1 N N N 22.475 42.362 8.193  2.942   -5.516 -0.191 H10 9JD 48 
9JD H11 H11 H 0 1 N N N 22.538 43.541 9.547  1.782   -6.310 -1.283 H11 9JD 49 
9JD H12 H12 H 0 1 N N N 24.827 41.823 8.553  3.306   -3.733 -1.876 H12 9JD 50 
9JD H13 H13 H 0 1 N N N 24.890 43.002 9.907  2.146   -4.527 -2.967 H13 9JD 51 
9JD H14 H14 H 0 1 N N N 23.633 39.742 8.787  -0.227  -4.536 -2.463 H14 9JD 52 
9JD H15 H15 H 0 1 N N N 22.859 38.009 10.345 -2.091  -3.390 -1.336 H15 9JD 53 
9JD H16 H16 H 0 1 N N N 22.565 38.526 12.729 -1.645  -1.854 0.532  H16 9JD 54 
9JD H17 H17 H 0 1 N N N 23.805 42.541 11.991 2.552   -2.626 0.146  H17 9JD 55 
9JD H18 H18 H 0 1 N N N 26.270 40.473 15.866 0.322   -0.059 -1.861 H18 9JD 56 
9JD H19 H19 H 0 1 N N N 24.460 45.811 13.100 3.771   2.518  -1.750 H19 9JD 57 
9JD H20 H20 H 0 1 N N N 24.563 44.577 11.799 4.010   2.879  -0.023 H20 9JD 58 
9JD H21 H21 H 0 1 N N N 29.995 47.491 13.249 8.850   3.168  -0.756 H21 9JD 59 
9JD H22 H22 H 0 1 N N N 28.578 48.453 12.709 9.656   1.762  -1.491 H22 9JD 60 
9JD H23 H23 H 0 1 N N N 28.648 47.824 14.390 8.610   2.807  -2.482 H23 9JD 61 
9JD H24 H24 H 0 1 N N N 25.355 39.796 12.714 -1.104  1.780  -1.007 H24 9JD 62 
9JD H25 H25 H 0 1 N N N 26.623 38.929 15.353 -0.718  2.161  1.997  H25 9JD 63 
9JD H26 H26 H 0 1 N N N 24.963 38.544 14.783 -0.125  3.266  0.734  H26 9JD 64 
9JD H27 H27 H 0 1 N N N 25.813 37.198 12.971 -2.265  4.082  1.663  H27 9JD 65 
9JD H28 H28 H 0 1 N N N 26.664 36.688 14.468 -2.464  3.613  -0.043 H28 9JD 66 
9JD H29 H29 H 0 1 N N N 28.143 36.955 12.430 -3.211  1.946  2.404  H29 9JD 67 
9JD H30 H30 H 0 1 N N N 28.637 37.921 13.861 -4.336  2.707  1.252  H30 9JD 68 
9JD H31 H31 H 0 1 N N N 28.046 40.249 13.964 -2.032  -0.399 -0.383 H31 9JD 69 
9JD H32 H32 H 0 1 N N N 27.425 41.076 12.495 -1.710  -0.078 1.340  H32 9JD 70 
9JD H33 H33 H 0 1 N N N 28.315 41.192 10.885 -5.977  1.330  0.980  H33 9JD 71 
9JD H34 H34 H 0 1 N N N 26.893 40.564 9.986  -5.536  2.378  -0.390 H34 9JD 72 
9JD H35 H35 H 0 1 N N N 28.637 39.452 8.398  -6.753  -0.407 -0.660 H35 9JD 73 
9JD H36 H36 H 0 1 N N N 30.456 39.963 9.821  -6.268  1.682  -2.617 H36 9JD 74 
9JD H37 H37 H 0 1 N N N 29.243 42.131 7.734  -8.305  1.287  0.356  H37 9JD 75 
9JD H38 H38 H 0 1 N N N 27.694 42.260 8.635  -8.038  2.331  -1.060 H38 9JD 76 
9JD H39 H39 H 0 1 N N N 27.367 42.036 6.314  -9.094  -0.418 -1.186 H39 9JD 77 
9JD H40 H40 H 0 1 N N N 28.171 40.615 6.272  -10.004 0.968  -1.318 H40 9JD 78 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9JD N40 C39 SING N N 1  
9JD C39 C36 SING N N 2  
9JD C01 C02 SING N N 3  
9JD C36 O38 SING N N 4  
9JD C36 C35 SING N N 5  
9JD C02 C03 SING N N 6  
9JD C04 C03 DOUB Y N 7  
9JD C04 C05 SING Y N 8  
9JD C35 C33 SING N N 9  
9JD C03 C08 SING Y N 10 
9JD O34 C33 DOUB N N 11 
9JD C05 C06 DOUB Y N 12 
9JD C33 N31 SING N N 13 
9JD C08 C07 DOUB Y N 14 
9JD C06 C07 SING Y N 15 
9JD N31 C30 SING N N 16 
9JD N31 C32 SING N N 17 
9JD N21 C20 SING N N 18 
9JD N21 C22 SING N N 19 
9JD C07 C09 SING N N 20 
9JD C20 C19 SING N N 21 
9JD O24 C22 SING N N 22 
9JD O24 C25 SING N N 23 
9JD C22 O23 DOUB N N 24 
9JD C30 C29 SING N N 25 
9JD C32 C26 SING N N 26 
9JD C18 C19 SING N N 27 
9JD C18 C16 SING N N 28 
9JD C26 C16 SING N N 29 
9JD C26 C28 SING N N 30 
9JD C29 C28 SING N N 31 
9JD F11 C10 SING N N 32 
9JD C09 C10 DOUB Y N 33 
9JD C09 C15 SING Y N 34 
9JD C16 C15 SING N N 35 
9JD C16 O17 SING N N 36 
9JD C10 C12 SING Y N 37 
9JD C15 C14 DOUB Y N 38 
9JD C12 C13 DOUB Y N 39 
9JD C14 C13 SING Y N 40 
9JD C12 H1  SING N N 41 
9JD C13 H2  SING N N 42 
9JD C14 H3  SING N N 43 
9JD C18 H4  SING N N 44 
9JD C18 H5  SING N N 45 
9JD C19 H6  SING N N 46 
9JD C19 H7  SING N N 47 
9JD N21 H8  SING N N 48 
9JD C01 H9  SING N N 49 
9JD C01 H10 SING N N 50 
9JD C01 H11 SING N N 51 
9JD C02 H12 SING N N 52 
9JD C02 H13 SING N N 53 
9JD C04 H14 SING N N 54 
9JD C05 H15 SING N N 55 
9JD C06 H16 SING N N 56 
9JD C08 H17 SING N N 57 
9JD O17 H18 SING N N 58 
9JD C20 H19 SING N N 59 
9JD C20 H20 SING N N 60 
9JD C25 H21 SING N N 61 
9JD C25 H22 SING N N 62 
9JD C25 H23 SING N N 63 
9JD C26 H24 SING N N 64 
9JD C28 H25 SING N N 65 
9JD C28 H26 SING N N 66 
9JD C29 H27 SING N N 67 
9JD C29 H28 SING N N 68 
9JD C30 H29 SING N N 69 
9JD C30 H30 SING N N 70 
9JD C32 H31 SING N N 71 
9JD C32 H32 SING N N 72 
9JD C35 H33 SING N N 73 
9JD C35 H34 SING N N 74 
9JD C36 H35 SING N N 75 
9JD O38 H36 SING N N 76 
9JD C39 H37 SING N N 77 
9JD C39 H38 SING N N 78 
9JD N40 H39 SING N N 79 
9JD N40 H40 SING N N 80 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9JD SMILES           ACDLabs              12.01 "c2(cccc(C(O)(CCCNC(=O)OC)C1CCCN(C1)C(=O)CC(O)CN)c2c3cccc(CC)c3)F" 
9JD InChI            InChI                1.03  
"InChI=1S/C29H40FN3O5/c1-3-20-8-4-9-21(16-20)27-24(11-5-12-25(27)30)29(37,13-7-14-32-28(36)38-2)22-10-6-15-33(19-22)26(35)17-23(34)18-31/h4-5,8-9,11-12,16,22-23,34,37H,3,6-7,10,13-15,17-19,31H2,1-2H3,(H,32,36)/t22-,23+,29+/m1/s1" 
9JD InChIKey         InChI                1.03  IIIBTAZKWKWKNG-AFKLWXAFSA-N 
9JD SMILES_CANONICAL CACTVS               3.385 "CCc1cccc(c1)c2c(F)cccc2[C@](O)(CCCNC(=O)OC)[C@@H]3CCCN(C3)C(=O)C[C@H](O)CN" 
9JD SMILES           CACTVS               3.385 "CCc1cccc(c1)c2c(F)cccc2[C](O)(CCCNC(=O)OC)[CH]3CCCN(C3)C(=O)C[CH](O)CN" 
9JD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCc1cccc(c1)c2c(cccc2F)[C@](CCCNC(=O)OC)([C@@H]3CCCN(C3)C(=O)C[C@@H](CN)O)O" 
9JD SMILES           "OpenEye OEToolkits" 2.0.6 "CCc1cccc(c1)c2c(cccc2F)C(CCCNC(=O)OC)(C3CCCN(C3)C(=O)CC(CN)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9JD "SYSTEMATIC NAME" ACDLabs              12.01 
;methyl [(4S)-4-{(3R)-1-[(3S)-4-amino-3-hydroxybutanoyl]piperidin-3-yl}-4-(3'-ethyl-6-fluoro[1,1'-biphenyl]-2-yl)-4-hydroxybutyl]carbamate
;
9JD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "methyl ~{N}-[(4~{S})-4-[(3~{R})-1-[(3~{S})-4-azanyl-3-oxidanyl-butanoyl]piperidin-3-yl]-4-[2-(3-ethylphenyl)-3-fluoranyl-phenyl]-4-oxidanyl-butyl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9JD "Create component" 2017-05-15 RCSB 
9JD "Initial release"  2017-10-18 RCSB 
# 
