data_9HD
#

_chem_comp.id                                   9HD
_chem_comp.name                                 "1-[(3R,5S,7R)-1,5,7,9-tetrakis(2-oxopyrrolidin-1-yl)nonan-3-yl]-1,3-dihydro-2H-pyrrol-2-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H43 N5 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Polyvinylpyrrolidone K15"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-05-11
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       541.682
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9HD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5VP8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9HD  C01  C1   C  0  1  N  N  N  39.719  123.367  283.935  -4.836  -2.165  -2.936  C01  9HD   1  
9HD  C04  C2   C  0  1  N  N  N  41.094  123.321  283.197  -3.886  -1.414  -2.418  C04  9HD   2  
9HD  N07  N1   N  0  1  N  N  N  40.833  122.696  281.823  -3.581  -1.771  -1.117  N07  9HD   3  
9HD  C08  C3   C  0  1  N  N  N  39.423  122.204  281.708  -4.334  -2.807  -0.697  C08  9HD   4  
9HD  C09  C4   C  0  1  N  N  N  38.670  122.521  283.065  -5.238  -3.156  -1.863  C09  9HD   5  
9HD  O12  O1   O  0  1  N  N  N  38.930  121.596  280.716  -4.299  -3.344   0.390  O12  9HD   6  
9HD  C13  C5   C  0  1  N  N  R  41.925  122.650  280.730  -2.564  -1.107  -0.299  C13  9HD   7  
9HD  C15  C6   C  0  1  N  N  N  42.717  121.319  280.925  -1.185  -1.320  -0.927  C15  9HD   8  
9HD  C18  C7   C  0  1  N  N  N  41.328  122.808  279.233  -2.865   0.391  -0.227  C18  9HD   9  
9HD  C21  C8   C  0  1  N  N  N  41.222  124.268  278.627  -4.187   0.610   0.513  C21  9HD  10  
9HD  N24  N2   N  0  1  N  N  N  40.787  125.163  279.686  -4.476   2.045   0.582  N24  9HD  11  
9HD  C25  C9   C  0  1  N  N  N  39.402  125.156  280.293  -5.175   2.723  -0.344  C25  9HD  12  
9HD  C26  C10  C  0  1  N  N  N  39.288  126.297  281.453  -5.271   4.182   0.042  C26  9HD  13  
9HD  C29  C11  C  0  1  N  N  N  40.757  126.814  281.664  -4.177   4.362   1.120  C29  9HD  14  
9HD  C32  C12  C  0  1  N  N  N  41.644  126.241  280.366  -4.044   2.925   1.674  C32  9HD  15  
9HD  C35  C13  C  0  1  N  N  S  44.128  121.209  280.313  -0.108  -0.766   0.009  C35  9HD  16  
9HD  O37  O2   O  0  1  N  N  N  38.459  124.402  279.983  -5.658   2.236  -1.344  O37  9HD  17  
9HD  C38  C14  C  0  1  N  N  N  44.771  119.859  280.561   1.262  -0.888  -0.663  C38  9HD  18  
9HD  C41  C15  C  0  1  N  N  R  45.733  119.099  279.509   2.322  -0.222   0.217  C41  9HD  19  
9HD  N43  N3   N  0  1  N  N  N  46.767  118.467  280.388   2.056   1.216   0.299  N43  9HD  20  
9HD  C44  C16  C  0  1  N  N  N  47.047  117.088  280.584   2.026   2.043  -0.761  C44  9HD  21  
9HD  C45  C17  C  0  1  N  N  N  48.191  116.908  281.572   1.734   3.457  -0.309  C45  9HD  22  
9HD  C48  C18  C  0  1  N  N  N  48.859  118.289  281.694   2.005   3.432   1.213  C48  9HD  23  
9HD  C51  C19  C  0  1  N  N  N  47.689  119.252  281.348   1.783   1.939   1.547  C51  9HD  24  
9HD  O54  O3   O  0  1  N  N  N  46.543  116.118  280.071   2.207   1.705  -1.911  O54  9HD  25  
9HD  C55  C20  C  0  1  N  N  N  46.223  119.957  278.305   3.707  -0.451  -0.391  C55  9HD  26  
9HD  C58  C21  C  0  1  N  N  N  47.189  119.277  277.298   4.776   0.105   0.551  C58  9HD  27  
9HD  N61  N4   N  0  1  N  N  N  48.649  119.632  277.454   6.102  -0.114  -0.032  N61  9HD  28  
9HD  C62  C22  C  0  1  N  N  N  49.158  120.760  278.356   6.727   0.756  -0.844  C62  9HD  29  
9HD  C63  C23  C  0  1  N  N  N  50.685  120.705  278.132   8.071   0.202  -1.264  C63  9HD  30  
9HD  C66  C24  C  0  1  N  N  N  50.944  119.904  276.758   7.984  -1.304  -0.922  C66  9HD  31  
9HD  C69  C25  C  0  1  N  N  N  49.787  118.916  276.682   6.922  -1.309   0.201  C69  9HD  32  
9HD  O72  O4   O  0  1  N  N  N  48.549  121.553  279.072   6.279   1.828  -1.189  O72  9HD  33  
9HD  C73  C26  C  0  1  N  N  N  46.275  124.159  281.771   0.014  -3.309   2.780  C73  9HD  34  
9HD  C76  C27  C  0  1  N  N  N  45.665  123.286  280.514   0.090  -2.856   1.338  C76  9HD  35  
9HD  O77  O5   O  0  1  N  N  N  45.817  123.440  279.272   0.298  -3.585   0.391  O77  9HD  36  
9HD  N78  N5   N  0  1  N  N  N  44.882  122.196  281.108  -0.108  -1.529   1.259  N78  9HD  37  
9HD  C79  C28  C  0  1  N  N  N  44.888  122.302  282.690  -0.323  -0.942   2.587  C79  9HD  38  
9HD  C82  C29  C  0  1  N  N  N  46.167  123.173  283.010  -0.669  -2.131   3.512  C82  9HD  39  
9HD  H1   H1   H  0  1  N  N  N  39.511  123.877  284.864  -5.250  -2.087  -3.930  H1   9HD  40  
9HD  H2   H2   H  0  1  N  N  N  42.044  123.663  283.580  -3.401  -0.609  -2.949  H2   9HD  41  
9HD  H3   H3   H  0  1  N  N  N  37.761  123.111  282.874  -6.285  -3.028  -1.588  H3   9HD  42  
9HD  H4   H4   H  0  1  N  N  N  38.400  121.589  283.584  -5.051  -4.175  -2.201  H4   9HD  43  
9HD  H5   H5   H  0  1  N  N  N  42.618  123.488  280.899  -2.574  -1.529   0.707  H5   9HD  44  
9HD  H6   H6   H  0  1  N  N  N  42.110  120.512  280.489  -1.017  -2.386  -1.083  H6   9HD  45  
9HD  H7   H7   H  0  1  N  N  N  42.819  121.157  282.008  -1.137  -0.800  -1.883  H7   9HD  46  
9HD  H8   H8   H  0  1  N  N  N  40.314  122.381  279.238  -2.062   0.898   0.307  H8   9HD  47  
9HD  H9   H9   H  0  1  N  N  N  41.970  122.220  278.561  -2.943   0.795  -1.236  H9   9HD  48  
9HD  H10  H10  H  0  1  N  N  N  42.204  124.587  278.248  -4.990   0.103  -0.021  H10  9HD  49  
9HD  H11  H11  H  0  1  N  N  N  40.491  124.279  277.805  -4.109   0.206   1.523  H11  9HD  50  
9HD  H12  H12  H  0  1  N  N  N  38.633  127.118  281.125  -5.067   4.819  -0.818  H12  9HD  51  
9HD  H13  H13  H  0  1  N  N  N  38.894  125.863  282.384  -6.255   4.403   0.457  H13  9HD  52  
9HD  H14  H14  H  0  1  N  N  N  41.167  126.424  282.608  -3.242   4.701   0.674  H14  9HD  53  
9HD  H15  H15  H  0  1  N  N  N  40.775  127.914  281.683  -4.507   5.050   1.899  H15  9HD  54  
9HD  H16  H16  H  0  1  N  N  N  42.592  125.806  280.717  -4.689   2.791   2.543  H16  9HD  55  
9HD  H17  H17  H  0  1  N  N  N  41.855  127.058  279.661  -3.007   2.718   1.938  H17  9HD  56  
9HD  H18  H18  H  0  1  N  N  N  44.117  121.460  279.242  -0.316   0.282   0.222  H18  9HD  57  
9HD  H19  H19  H  0  1  N  N  N  43.939  119.166  280.756   1.509  -1.941  -0.796  H19  9HD  58  
9HD  H20  H20  H  0  1  N  N  N  45.370  119.980  281.476   1.235  -0.395  -1.635  H20  9HD  59  
9HD  H21  H21  H  0  1  N  N  N  45.128  118.284  279.084   2.288  -0.655   1.217  H21  9HD  60  
9HD  H22  H22  H  0  1  N  N  N  47.806  116.581  282.549   2.402   4.161  -0.804  H22  9HD  61  
9HD  H23  H23  H  0  1  N  N  N  48.910  116.166  281.195   0.693   3.714  -0.507  H23  9HD  62  
9HD  H24  H24  H  0  1  N  N  N  49.688  118.396  280.979   3.028   3.737   1.432  H24  9HD  63  
9HD  H25  H25  H  0  1  N  N  N  49.231  118.463  282.715   1.290   4.059   1.747  H25  9HD  64  
9HD  H26  H26  H  0  1  N  N  N  48.072  120.158  280.856   0.754   1.769   1.863  H26  9HD  65  
9HD  H27  H27  H  0  1  N  N  N  47.142  119.533  282.260   2.475   1.620   2.326  H27  9HD  66  
9HD  H28  H28  H  0  1  N  N  N  46.738  120.839  278.714   3.869  -1.520  -0.534  H28  9HD  67  
9HD  H29  H29  H  0  1  N  N  N  45.333  120.280  277.744   3.770   0.058  -1.353  H29  9HD  68  
9HD  H30  H30  H  0  1  N  N  N  46.877  119.564  276.283   4.614   1.174   0.694  H30  9HD  69  
9HD  H31  H31  H  0  1  N  N  N  47.091  118.188  277.417   4.713  -0.403   1.513  H31  9HD  70  
9HD  H32  H32  H  0  1  N  N  N  51.169  120.181  278.969   8.224   0.343  -2.334  H32  9HD  71  
9HD  H33  H33  H  0  1  N  N  N  51.090  121.725  278.054   8.873   0.678  -0.699  H33  9HD  72  
9HD  H34  H34  H  0  1  N  N  N  51.908  119.375  276.790   7.649  -1.880  -1.784  H34  9HD  73  
9HD  H35  H35  H  0  1  N  N  N  50.930  120.589  275.898   8.941  -1.676  -0.554  H35  9HD  74  
9HD  H36  H36  H  0  1  N  N  N  49.497  118.730  275.637   7.405  -1.259   1.177  H36  9HD  75  
9HD  H37  H37  H  0  1  N  N  N  50.051  117.963  277.165   6.304  -2.204   0.132  H37  9HD  76  
9HD  H38  H38  H  0  1  N  N  N  47.322  124.437  281.582  -0.589  -4.213   2.865  H38  9HD  77  
9HD  H39  H39  H  0  1  N  N  N  45.679  125.068  281.941   1.013  -3.480   3.181  H39  9HD  78  
9HD  H40  H40  H  0  1  N  N  N  43.976  122.799  283.052   0.585  -0.447   2.933  H40  9HD  79  
9HD  H41  H41  H  0  1  N  N  N  44.969  121.305  283.148  -1.151  -0.235   2.557  H41  9HD  80  
9HD  H42  H42  H  0  1  N  N  N  47.063  122.540  283.086  -1.747  -2.280   3.569  H42  9HD  81  
9HD  H43  H43  H  0  1  N  N  N  46.034  123.734  283.947  -0.243  -1.989   4.505  H43  9HD  82  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9HD  C69  C66  SING  N  N   1  
9HD  C69  N61  SING  N  N   2  
9HD  C66  C63  SING  N  N   3  
9HD  C58  N61  SING  N  N   4  
9HD  C58  C55  SING  N  N   5  
9HD  N61  C62  SING  N  N   6  
9HD  C63  C62  SING  N  N   7  
9HD  C55  C41  SING  N  N   8  
9HD  C62  O72  DOUB  N  N   9  
9HD  C21  C18  SING  N  N  10  
9HD  C21  N24  SING  N  N  11  
9HD  C18  C13  SING  N  N  12  
9HD  O77  C76  DOUB  N  N  13  
9HD  C41  N43  SING  N  N  14  
9HD  C41  C38  SING  N  N  15  
9HD  N24  C25  SING  N  N  16  
9HD  N24  C32  SING  N  N  17  
9HD  O37  C25  DOUB  N  N  18  
9HD  O54  C44  DOUB  N  N  19  
9HD  C25  C26  SING  N  N  20  
9HD  C35  C38  SING  N  N  21  
9HD  C35  C15  SING  N  N  22  
9HD  C35  N78  SING  N  N  23  
9HD  C32  C29  SING  N  N  24  
9HD  N43  C44  SING  N  N  25  
9HD  N43  C51  SING  N  N  26  
9HD  C76  N78  SING  N  N  27  
9HD  C76  C73  SING  N  N  28  
9HD  C44  C45  SING  N  N  29  
9HD  O12  C08  DOUB  N  N  30  
9HD  C13  C15  SING  N  N  31  
9HD  C13  N07  SING  N  N  32  
9HD  N78  C79  SING  N  N  33  
9HD  C51  C48  SING  N  N  34  
9HD  C26  C29  SING  N  N  35  
9HD  C45  C48  SING  N  N  36  
9HD  C08  N07  SING  N  N  37  
9HD  C08  C09  SING  N  N  38  
9HD  C73  C82  SING  N  N  39  
9HD  N07  C04  SING  N  N  40  
9HD  C79  C82  SING  N  N  41  
9HD  C09  C01  SING  N  N  42  
9HD  C04  C01  DOUB  N  N  43  
9HD  C01  H1   SING  N  N  44  
9HD  C04  H2   SING  N  N  45  
9HD  C09  H3   SING  N  N  46  
9HD  C09  H4   SING  N  N  47  
9HD  C13  H5   SING  N  N  48  
9HD  C15  H6   SING  N  N  49  
9HD  C15  H7   SING  N  N  50  
9HD  C18  H8   SING  N  N  51  
9HD  C18  H9   SING  N  N  52  
9HD  C21  H10  SING  N  N  53  
9HD  C21  H11  SING  N  N  54  
9HD  C26  H12  SING  N  N  55  
9HD  C26  H13  SING  N  N  56  
9HD  C29  H14  SING  N  N  57  
9HD  C29  H15  SING  N  N  58  
9HD  C32  H16  SING  N  N  59  
9HD  C32  H17  SING  N  N  60  
9HD  C35  H18  SING  N  N  61  
9HD  C38  H19  SING  N  N  62  
9HD  C38  H20  SING  N  N  63  
9HD  C41  H21  SING  N  N  64  
9HD  C45  H22  SING  N  N  65  
9HD  C45  H23  SING  N  N  66  
9HD  C48  H24  SING  N  N  67  
9HD  C48  H25  SING  N  N  68  
9HD  C51  H26  SING  N  N  69  
9HD  C51  H27  SING  N  N  70  
9HD  C55  H28  SING  N  N  71  
9HD  C55  H29  SING  N  N  72  
9HD  C58  H30  SING  N  N  73  
9HD  C58  H31  SING  N  N  74  
9HD  C63  H32  SING  N  N  75  
9HD  C63  H33  SING  N  N  76  
9HD  C66  H34  SING  N  N  77  
9HD  C66  H35  SING  N  N  78  
9HD  C69  H36  SING  N  N  79  
9HD  C69  H37  SING  N  N  80  
9HD  C73  H38  SING  N  N  81  
9HD  C73  H39  SING  N  N  82  
9HD  C79  H40  SING  N  N  83  
9HD  C79  H41  SING  N  N  84  
9HD  C82  H42  SING  N  N  85  
9HD  C82  H43  SING  N  N  86  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9HD  SMILES            ACDLabs               12.01  "C1=CN(C(C1)=O)C(CC(CC(N2C(CCC2)=O)CCN3C(=O)CCC3)N4C(CCC4)=O)CCN5C(CCC5)=O"  
9HD  InChI             InChI                 1.03   "InChI=1S/C29H43N5O5/c35-25-6-1-13-30(25)18-11-22(32-15-3-8-27(32)37)20-24(34-17-5-10-29(34)39)21-23(33-16-4-9-28(33)38)12-19-31-14-2-7-26(31)36/h3,15,22-24H,1-2,4-14,16-21H2/t22-,23-,24-/m1/s1"  
9HD  InChIKey          InChI                 1.03   UBULRTDFHFSWCU-WXFUMESZSA-N  
9HD  SMILES_CANONICAL  CACTVS                3.385  "O=C1CCCN1CC[C@H](C[C@@H](C[C@@H](CCN2CCCC2=O)N3C=CCC3=O)N4CCCC4=O)N5CCCC5=O"  
9HD  SMILES            CACTVS                3.385  "O=C1CCCN1CC[CH](C[CH](C[CH](CCN2CCCC2=O)N3C=CCC3=O)N4CCCC4=O)N5CCCC5=O"  
9HD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C1CC(=O)N(C1)CC[C@H](C[C@@H](C[C@@H](CCN2CCCC2=O)N3C=CCC3=O)N4CCCC4=O)N5CCCC5=O"  
9HD  SMILES            "OpenEye OEToolkits"  2.0.6  "C1CC(=O)N(C1)CCC(CC(CC(CCN2CCCC2=O)N3C=CCC3=O)N4CCCC4=O)N5CCCC5=O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9HD  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-[(3R,5S,7R)-1,5,7,9-tetrakis(2-oxopyrrolidin-1-yl)nonan-3-yl]-1,3-dihydro-2H-pyrrol-2-one"  
9HD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "1-[(3~{R},5~{S},7~{R})-1,5,7,9-tetrakis(2-oxidanylidenepyrrolidin-1-yl)nonan-3-yl]-3~{H}-pyrrol-2-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9HD  "Create component"  2017-05-11  RCSB  
9HD  "Initial release"   2018-02-07  RCSB  
9HD  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     9HD
_pdbx_chem_comp_synonyms.name        "Polyvinylpyrrolidone K15"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
