data_46D
#

_chem_comp.id                                   46D
_chem_comp.name                                 "(4AR,6R,7S,8R,8AR)-8-((5R,6R)-3-CARBOXY-TETRAHYDRO-4,5,6-TRIHYDROXY-2H-PYRAN-2-YLOXY)-HEXAHYDRO-6,7-DIHYDROXY-2-METHYLPYRANO[3,2-D][1,3]DIOXINE-2-CARBOXYLIC ACID)"
_chem_comp.type                                 saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C15 H22 O14"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4,6-O-(1-CARBOXYETHYLIDENE)-BETA-D-MANNOSE-(1-&gt;4)-BETA-D-GLUCURONIC ACID"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2005-04-11
_chem_comp.pdbx_modified_date                   2021-03-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       426.327
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    46D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1X1J
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
46D  O6A   O6A   O  0  1  N  N  N  20.737  56.248  80.081  -8.916  -1.143  -3.173  O6A   46D   1  
46D  C6    C6    C  0  1  N  N  N  19.659  56.616  79.566  -8.381  -1.352  -4.401  C6    46D   2  
46D  O6B   O6B   O  0  1  N  N  N  18.778  55.831  79.154  -8.279  -0.492  -5.262  O6B   46D   3  
46D  C5    C5    C  0  1  N  N  S  19.417  58.120  79.424  -7.936  -2.771  -4.547  C5    46D   4  
46D  O5    O5    O  0  1  N  N  N  20.049  58.566  78.211  -8.153  -3.043  -5.925  O5    46D   5  
46D  C1    C1    C  0  1  N  N  R  19.948  59.990  78.043  -7.823  -4.385  -6.273  C1    46D   6  
46D  C2    C2    C  0  1  N  N  R  18.472  60.375  77.913  -6.337  -4.646  -6.028  C2    46D   7  
46D  O2    O2    O  0  1  N  N  N  18.364  61.796  77.788  -6.043  -6.020  -6.278  O2    46D   8  
46D  C3    C3    C  0  1  N  N  R  17.699  59.908  79.149  -5.944  -4.301  -4.591  C3    46D   9  
46D  O3    O3    O  0  1  N  N  N  16.306  60.146  78.933  -4.520  -4.297  -4.480  O3    46D  10  
46D  C4    C4    C  0  1  N  N  S  17.922  58.415  79.409  -6.464  -2.921  -4.185  C4    46D  11  
46D  OP1   OP1   O  0  1  N  N  N  17.358  58.040  80.677  -6.320  -2.765  -2.781  OP1   46D  12  
46D  CP1   CP1   C  0  1  N  N  S  16.101  57.359  80.531  -5.460  -1.674  -2.465  CP1   46D  13  
46D  OP5   OP5   O  0  1  N  N  N  15.062  58.292  80.187  -4.165  -1.867  -3.044  OP5   46D  14  
46D  CP5   CP5   C  0  1  N  N  R  13.800  57.631  79.994  -3.291  -0.771  -2.778  CP5   46D  15  
46D  CP6   CP6   C  0  1  N  N  N  12.718  58.617  79.586  -1.952  -0.988  -3.483  CP6   46D  16  
46D  OP6   OP6   O  0  1  N  N  N  11.470  57.922  79.423  -0.848  -0.602  -2.663  OP6   46D  17  
46D  CP7   CP7   C  0  1  N  N  S  11.040  57.201  80.586  -1.085   0.577  -1.896  CP7   46D  18  
46D  CP9   CP9   C  0  1  N  N  N  10.582  58.152  81.696   0.057   0.587  -0.928  CP9   46D  19  
46D  OP7   OP7   O  0  1  N  N  N  10.631  57.722  82.868  -0.054   0.556   0.288  OP7   46D  20  
46D  OP8   OP8   O  0  1  N  N  N  10.191  59.288  81.349   1.241   0.637  -1.586  OP8   46D  21  
46D  CP8   CP8   C  0  1  N  N  N   9.847  56.335  80.177  -1.052   1.838  -2.748  CP8   46D  22  
46D  OP4   OP4   O  0  1  N  N  N  12.073  56.323  81.055  -2.254   0.572  -1.074  OP4   46D  23  
46D  CP4   CP4   C  0  1  N  N  S  13.326  56.988  81.287  -3.062  -0.588  -1.279  CP4   46D  24  
46D  CP3   CP3   C  0  1  N  N  R  14.385  55.977  81.731  -4.401  -0.420  -0.562  CP3   46D  25  
46D  OP3   OP3   O  0  1  N  N  N  14.015  55.442  83.005  -4.184  -0.410   0.845  OP3   46D  26  
46D  CP2   CP2   C  0  1  N  N  S  15.755  56.651  81.845  -5.352  -1.560  -0.941  CP2   46D  27  
46D  OP2   OP2   O  0  1  N  N  N  15.713  57.614  82.901  -4.838  -2.798  -0.438  OP2   46D  28  
46D  O1    O1    O  0  1  N  Y  N       ?       ?       ?  -8.085  -4.604  -7.658  O1    46D  29  
46D  H6A   H6A   H  0  1  N  N  N  21.406  56.844  80.394  -9.213  -0.215  -3.056  H6A   46D  30  
46D  H5    H5    H  0  1  N  N  N  19.854  58.667  80.291  -8.588  -3.394  -3.924  H5    46D  31  
46D  H1    H1    H  0  1  N  N  N  20.595  60.782  78.484  -8.446  -5.087  -5.705  H1    46D  32  
46D  H2    H2    H  0  1  N  N  N  18.041  59.884  77.009  -5.728  -4.064  -6.731  H2    46D  33  
46D  HO2   HO2   H  0  1  N  N  N  17.448  62.034  77.707  -6.633  -6.300  -6.994  HO2   46D  34  
46D  H3    H3    H  0  1  N  N  N  18.063  60.474  80.037  -6.307  -5.065  -3.892  H3    46D  35  
46D  HO3   HO3   H  0  1  N  N  N  15.826  59.856  79.700  -4.198  -3.643  -5.118  HO3   46D  36  
46D  H4    H4    H  0  1  N  N  N  17.425  57.831  78.599  -5.860  -2.140  -4.666  H4    46D  37  
46D  HP1   HP1   H  0  1  N  N  N  16.184  56.607  79.711  -5.912  -0.772  -2.892  HP1   46D  38  
46D  HP5   HP5   H  0  1  N  N  N  13.962  56.868  79.197  -3.737   0.141  -3.200  HP5   46D  39  
46D  HP61  1HP6  H  0  0  N  N  N  12.634  59.469  80.299  -1.809  -2.039  -3.754  HP61  46D  40  
46D  HP62  2HP6  H  0  0  N  N  N  12.998  59.197  78.676  -1.915  -0.416  -4.417  HP62  46D  41  
46D  HP8   HP8   H  0  1  N  N  N   9.906  59.877  82.037   2.003   0.646  -0.968  HP8   46D  42  
46D  HP81  1HP8  H  0  0  N  N  N   9.512  55.774  81.081  -0.993   2.728  -2.115  HP81  46D  43  
46D  HP82  2HP8  H  0  0  N  N  N   9.026  56.922  79.702  -0.184   1.830  -3.414  HP82  46D  44  
46D  HP83  3HP8  H  0  0  N  N  N  10.070  55.669  79.311  -1.955   1.911  -3.362  HP83  46D  45  
46D  HP4   HP4   H  0  1  N  N  N  13.180  57.757  82.080  -2.535  -1.451  -0.849  HP4   46D  46  
46D  HP3   HP3   H  0  1  N  N  N  14.447  55.161  80.973  -4.847   0.547  -0.823  HP3   46D  47  
46D  H6    H6    H  0  1  N  N  N  14.672  54.814  83.280  -4.624   0.384   1.187  H6    46D  48  
46D  HP2   HP2   H  0  1  N  N  N  16.530  55.879  82.059  -6.335  -1.425  -0.479  HP2   46D  49  
46D  H7    H7    H  0  1  N  N  N  15.498  57.175  83.715  -4.474  -2.603   0.437  H7    46D  50  
46D  HO1   HO1   H  0  1  N  N  N  -0.066   0.941  -0.111  -7.306  -4.284  -8.139  HO1   46D  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
46D  O6A  C6    SING  N  N   1  
46D  O6A  H6A   SING  N  N   2  
46D  C6   O6B   DOUB  N  N   3  
46D  C6   C5    SING  N  N   4  
46D  C5   O5    SING  N  N   5  
46D  C5   C4    SING  N  N   6  
46D  C5   H5    SING  N  N   7  
46D  O5   C1    SING  N  N   8  
46D  C1   C2    SING  N  N   9  
46D  C1   O1    SING  N  N  10  
46D  C1   H1    SING  N  N  11  
46D  C2   O2    SING  N  N  12  
46D  C2   C3    SING  N  N  13  
46D  C2   H2    SING  N  N  14  
46D  O2   HO2   SING  N  N  15  
46D  C3   O3    SING  N  N  16  
46D  C3   C4    SING  N  N  17  
46D  C3   H3    SING  N  N  18  
46D  O3   HO3   SING  N  N  19  
46D  C4   OP1   SING  N  N  20  
46D  C4   H4    SING  N  N  21  
46D  OP1  CP1   SING  N  N  22  
46D  CP1  OP5   SING  N  N  23  
46D  CP1  CP2   SING  N  N  24  
46D  CP1  HP1   SING  N  N  25  
46D  OP5  CP5   SING  N  N  26  
46D  CP5  CP6   SING  N  N  27  
46D  CP5  CP4   SING  N  N  28  
46D  CP5  HP5   SING  N  N  29  
46D  CP6  OP6   SING  N  N  30  
46D  CP6  HP61  SING  N  N  31  
46D  CP6  HP62  SING  N  N  32  
46D  OP6  CP7   SING  N  N  33  
46D  CP7  CP9   SING  N  N  34  
46D  CP7  CP8   SING  N  N  35  
46D  CP7  OP4   SING  N  N  36  
46D  CP9  OP7   DOUB  N  N  37  
46D  CP9  OP8   SING  N  N  38  
46D  OP8  HP8   SING  N  N  39  
46D  CP8  HP81  SING  N  N  40  
46D  CP8  HP82  SING  N  N  41  
46D  CP8  HP83  SING  N  N  42  
46D  OP4  CP4   SING  N  N  43  
46D  CP4  CP3   SING  N  N  44  
46D  CP4  HP4   SING  N  N  45  
46D  CP3  OP3   SING  N  N  46  
46D  CP3  CP2   SING  N  N  47  
46D  CP3  HP3   SING  N  N  48  
46D  OP3  H6    SING  N  N  49  
46D  CP2  OP2   SING  N  N  50  
46D  CP2  HP2   SING  N  N  51  
46D  OP2  H7    SING  N  N  52  
46D  O1   HO1   SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
46D  SMILES            ACDLabs               10.04  "O=C(O)C3OC(O)C(O)C(O)C3OC1OC2COC(OC2C(O)C1O)(C(=O)O)C"  
46D  SMILES_CANONICAL  CACTVS                3.341  "C[C@@]1(OC[C@H]2O[C@@H](O[C@H]3[C@H](O)[C@@H](O)[C@H](O)O[C@@H]3C(O)=O)[C@@H](O)[C@@H](O)[C@@H]2O1)C(O)=O"  
46D  SMILES            CACTVS                3.341  "C[C]1(OC[CH]2O[CH](O[CH]3[CH](O)[CH](O)[CH](O)O[CH]3C(O)=O)[CH](O)[CH](O)[CH]2O1)C(O)=O"  
46D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@@]1(OC[C@@H]2[C@@H](O1)[C@@H]([C@@H]([C@@H](O2)O[C@H]3[C@@H]([C@H]([C@@H](O[C@@H]3C(=O)O)O)O)O)O)O)C(=O)O"  
46D  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1(OCC2C(O1)C(C(C(O2)OC3C(C(C(OC3C(=O)O)O)O)O)O)O)C(=O)O"  
46D  InChI             InChI                 1.03   "InChI=1S/C15H22O14/c1-15(14(23)24)25-2-3-8(29-15)5(17)7(19)13(26-3)28-9-4(16)6(18)12(22)27-10(9)11(20)21/h3-10,12-13,16-19,22H,2H2,1H3,(H,20,21)(H,23,24)/t3-,4-,5-,6-,7+,8-,9+,10+,12?,13+,15+/m1/s1"  
46D  InChIKey          InChI                 1.03   GZJXZKGVHLWBOW-AISSFXTFSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
46D  "SYSTEMATIC NAME"  ACDLabs               10.04  "4-O-{4,6-O-[(1S)-1-carboxyethylidene]-beta-D-mannopyranosyl}-beta-D-glucopyranuronic acid"  
46D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,4aR,6S,7S,8R,8aS)-6-[(2S,3S,4R,5R,6R)-2-carboxy-4,5,6-trihydroxy-oxan-3-yl]oxy-7,8-dihydroxy-2-methyl-4,4a,6,7,8,8a-hexahydropyrano[5,6-d][1,3]dioxine-2-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
46D  "Create component"   2005-04-11  RCSB  
46D  "Modify descriptor"  2011-06-04  RCSB  
46D  "Modify synonyms"    2021-03-03  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     46D
_pdbx_chem_comp_synonyms.name        "4,6-O-(1-CARBOXYETHYLIDENE)-BETA-D-MANNOSE-(1-&gt;4)-BETA-D-GLUCURONIC ACID"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
