data_44D
#

_chem_comp.id                                   44D
_chem_comp.name                                 "7-[5-(4-AMINO-5-HYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YLOXY)-4-HYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YLOXY]-6,9,11-TRIHYDROXY-9-(2-HYDROXY-ACETYL)-7,8,9,10-TETRAHYDRO-NAPHTHACENE-5,12-DIONE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C32 H37 N O13"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4'-(O-ALPHA-L-DAUNOSAMINYL)-4-DEMETHOXYDOXORUBICIN"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2002-12-16
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       643.635
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    44D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1NAB
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
44D  C1      C1      C  0  1  Y  N  N   2.560  18.262  20.318  -8.048  -2.158  -0.120  C1      44D   1  
44D  C2      C2      C  0  1  Y  N  N   3.535  19.117  20.992  -8.368  -3.497   0.023  C2      44D   2  
44D  C3      C3      C  0  1  Y  N  N   4.337  19.899  20.160  -7.391  -4.421   0.347  C3      44D   3  
44D  C4      C4      C  0  1  Y  N  N   4.220  19.873  18.755  -6.080  -4.020   0.533  C4      44D   4  
44D  C5      C5      C  0  1  N  N  N   3.161  18.992  16.776  -4.344  -2.231   0.584  C5      44D   5  
44D  C6      C6      C  0  1  Y  N  N   2.125  18.039  14.860  -2.612  -0.523   0.036  C6      44D   6  
44D  C7      C7      C  0  1  N  N  S   1.085  17.230  12.825  -0.778   1.077  -0.471  C7      44D   7  
44D  C8      C8      C  0  1  N  N  N   0.064  16.217  12.327  -0.536   2.310  -1.339  C8      44D   8  
44D  C9      C9      C  0  1  N  N  S   0.076  14.886  13.020  -1.452   3.436  -0.843  C9      44D   9  
44D  C10     C10     C  0  1  N  N  N  -0.423  15.234  14.488  -2.893   3.071  -1.192  C10     44D  10  
44D  C11     C11     C  0  1  Y  N  N   0.518  16.394  16.461  -4.574   1.333  -0.618  C11     44D  11  
44D  C12     C12     C  0  1  N  N  N   1.573  17.381  18.389  -6.372  -0.312  -0.086  C12     44D  12  
44D  C13     C13     C  0  1  N  N  N  -1.032  14.031  12.327  -1.312   3.584   0.650  C13     44D  13  
44D  C14     C14     C  0  1  N  N  N  -0.794  12.610  12.018  -0.192   4.414   1.223  C14     44D  14  
44D  C15     C15     C  0  1  Y  N  N   2.492  18.281  18.925  -6.734  -1.739   0.063  C15     44D  15  
44D  C16     C16     C  0  1  Y  N  N   3.259  19.068  18.143  -5.741  -2.679   0.392  C16     44D  16  
44D  C17     C17     C  0  1  Y  N  N   2.238  18.111  16.234  -3.953  -0.882   0.137  C17     44D  17  
44D  C18     C18     C  0  1  Y  N  N   1.422  17.275  17.009  -4.950   0.061  -0.193  C18     44D  18  
44D  C19     C19     C  0  1  Y  N  N   0.386  16.345  15.068  -3.219   1.678  -0.718  C19     44D  19  
44D  C20     C20     C  0  1  Y  N  N   1.183  17.162  14.324  -2.250   0.763  -0.394  C20     44D  20  
44D  O5      O5      O  0  1  N  N  N   4.015  19.729  16.032  -3.528  -2.967   1.105  O5      44D  21  
44D  O6      O6      O  0  1  N  N  N   2.945  18.829  14.098  -1.648  -1.422   0.354  O6      44D  22  
44D  O7      O7      O  0  1  N  N  N   2.310  17.067  12.232  -0.087  -0.039  -1.034  O7      44D  23  
44D  O9      O9      O  0  1  N  N  N   1.304  14.111  12.787  -1.097   4.662  -1.484  O9      44D  24  
44D  O11     O11     O  0  1  N  N  N  -0.295  15.563  17.230  -5.526   2.244  -0.937  O11     44D  25  
44D  O12     O12     O  0  1  N  N  N   0.934  16.693  19.297  -7.236   0.542  -0.120  O12     44D  26  
44D  O13     O13     O  0  1  N  N  N  -2.272  14.519  12.446  -2.096   3.037   1.387  O13     44D  27  
44D  O14     O14     O  0  1  N  N  N  -1.989  11.933  11.558  -0.272   4.401   2.650  O14     44D  28  
44D  C1B     C1*     C  0  1  N  N  R   2.892  17.812  11.218   1.166  -0.135  -0.355  C1B     44D  29  
44D  C2B     C2*     C  0  1  N  N  N   4.363  17.657  10.940   1.821  -1.479  -0.684  C2B     44D  30  
44D  C3B     C3*     C  0  1  N  N  S   4.371  16.239  10.348   3.149  -1.588   0.073  C3B     44D  31  
44D  C4B     C4*     C  0  1  N  N  S   3.671  16.239   8.980   3.998  -0.352  -0.246  C4B     44D  32  
44D  C5B     C5*     C  0  1  N  N  S   2.201  16.557   9.289   3.179   0.907   0.050  C5B     44D  33  
44D  C6B     C6*     C  0  1  N  N  N   1.312  16.508   8.079   2.758   0.905   1.521  C6B     44D  34  
44D  "O3'"   O3*     O  0  1  N  N  N   5.792  15.687  10.184   2.897  -1.649   1.478  "O3'"   44D  35  
44D  O4B     O4*     O  0  1  N  N  N   4.235  17.117   8.029   5.175  -0.358   0.565  O4B     44D  36  
44D  O5B     O5*     O  0  1  N  N  N   2.174  17.824   9.989   2.016   0.931  -0.775  O5B     44D  37  
44D  "C1'"   "C1'"   C  0  1  N  N  S   4.946  17.154   6.882   6.195   0.308  -0.182  "C1'"   44D  38  
44D  "C2'"   "C2'"   C  0  1  N  N  N   4.677  18.447   6.170   7.447   0.452   0.685  "C2'"   44D  39  
44D  "C3'"   "C3'"   C  0  1  N  N  S   5.781  19.412   6.378   7.916  -0.941   1.121  "C3'"   44D  40  
44D  "C4'"   "C4'"   C  0  1  N  N  S   7.267  18.954   6.516   8.084  -1.813  -0.129  "C4'"   44D  41  
44D  "C5'"   "C5'"   C  0  1  N  N  S   7.248  17.672   7.405   6.783  -1.787  -0.934  "C5'"   44D  42  
44D  "C6'"   "C6'"   C  0  1  N  N  N   8.670  17.283   7.783   6.928  -2.684  -2.165  "C6'"   44D  43  
44D  "O4'"   "O4'"   O  0  1  N  N  N   8.209  18.792   5.401   9.154  -1.305  -0.927  "O4'"   44D  44  
44D  "O5'"   "O5'"   O  0  1  N  N  N   6.348  16.754   6.794   6.500  -0.453  -1.350  "O5'"   44D  45  
44D  "N3'"   "N3'"   N  0  1  N  N  N   5.766  20.308   5.212   9.200  -0.831   1.825  "N3'"   44D  46  
44D  HC1     HC1     H  0  1  N  N  N   1.870  17.597  20.865  -8.815  -1.442  -0.373  HC1     44D  47  
44D  HC2     HC2     H  0  1  N  N  N   3.661  19.170  22.087  -9.388  -3.823  -0.120  HC2     44D  48  
44D  HC3     HC3     H  0  1  N  N  N   5.087  20.559  20.628  -7.654  -5.463   0.457  HC3     44D  49  
44D  HC4     HC4     H  0  1  N  N  N   4.887  20.489  18.128  -5.322  -4.747   0.787  HC4     44D  50  
44D  HC7     HC7     H  0  1  N  N  N   0.732  18.247  12.535  -0.398   1.265   0.534  HC7     44D  51  
44D  HC81    1HC8    H  0  0  N  N  N   0.176  16.074  11.227   0.506   2.620  -1.255  HC81    44D  52  
44D  HC82    2HC8    H  0  0  N  N  N  -0.959  16.658  12.367  -0.768   2.078  -2.378  HC82    44D  53  
44D  H101    1H10    H  0  0  N  N  N  -0.425  14.335  15.148  -3.569   3.780  -0.714  H101    44D  54  
44D  H102    2H10    H  0  0  N  N  N  -1.514  15.461  14.511  -3.025   3.123  -2.273  H102    44D  55  
44D  H141    1H14    H  0  0  N  N  N  -0.344  12.080  12.890   0.765   4.000   0.909  H141    44D  56  
44D  H142    2H14    H  0  0  N  N  N   0.040  12.493  11.287  -0.280   5.440   0.864  H142    44D  57  
44D  HO6     HO6     H  0  1  N  N  N   2.867  18.780  13.153  -1.389  -1.857  -0.469  HO6     44D  58  
44D  HO9     HO9     H  0  1  N  N  N   1.312  13.268  13.226  -1.697   5.340  -1.143  HO9     44D  59  
44D  H11     H11     H  0  1  N  N  N  -0.919  14.955  16.852  -5.712   2.135  -1.880  H11     44D  60  
44D  H14     H14     H  0  1  N  N  N  -1.836  11.017  11.359   0.460   4.943   2.976  H14     44D  61  
44D  H1B     H1*     H  0  1  N  N  N   2.808  18.806  11.716   1.002  -0.066   0.720  H1B     44D  62  
44D  "H2'1"  1H2*    H  0  0  N  N  N   5.043  17.827  11.807   1.160  -2.290  -0.380  "H2'1"  44D  63  
44D  "H2'2"  2H2*    H  0  0  N  N  N   4.826  18.451  10.309   2.007  -1.541  -1.756  "H2'2"  44D  64  
44D  H3B     H3*     H  0  1  N  N  N   3.826  15.581  11.064   3.677  -2.488  -0.244  H3B     44D  65  
44D  H4B     H4*     H  0  1  N  N  N   3.793  15.249   8.481   4.280  -0.364  -1.298  H4B     44D  66  
44D  H5B     H5*     H  0  1  N  N  N   1.768  15.764   9.942   3.786   1.790  -0.152  H5B     44D  67  
44D  "H6'1"  1H6*    H  0  0  N  N  N   1.403  15.525   7.561   3.645   0.881   2.153  "H6'1"  44D  68  
44D  "H6'2"  2H6*    H  0  0  N  N  N   0.245  16.739   8.303   2.184   1.807   1.736  "H6'2"  44D  69  
44D  "H6'3"  3H6*    H  0  0  N  N  N   1.701  17.177   7.276   2.144   0.027   1.723  "H6'3"  44D  70  
44D  "H3'O"  OH3*    H  0  0  N  N  N   5.797  14.810   9.818   2.351  -2.432   1.630  "H3'O"  44D  71  
44D  "H1'"   "H1'"   H  0  1  N  N  N   4.536  16.250   6.374   5.841   1.296  -0.476  "H1'"   44D  72  
44D  H2B     "1H2'"  H  0  1  N  N  N   3.693  18.880   6.465   8.235   0.939   0.110  H2B     44D  73  
44D  H2D     "2H2'"  H  0  1  N  N  N   4.474  18.284   5.086   7.214   1.050   1.566  H2D     44D  74  
44D  "H3'"   "H3'"   H  0  1  N  N  N   5.546  19.814   7.391   7.173  -1.387   1.782  "H3'"   44D  75  
44D  "H4'"   "H4'"   H  0  1  N  N  N   7.736  19.882   6.920   8.306  -2.838   0.169  "H4'"   44D  76  
44D  "H5'"   "H5'"   H  0  1  N  N  N   6.820  17.780   8.429   5.965  -2.154  -0.313  "H5'"   44D  77  
44D  H6B     "1H6'"  H  0  1  N  N  N   9.218  18.123   8.271   7.745  -2.318  -2.786  H6B     44D  78  
44D  H6D     "2H6'"  H  0  1  N  N  N   8.656  16.367   8.418   7.142  -3.705  -1.848  H6D     44D  79  
44D  H6E     "3H6'"  H  0  1  N  N  N   9.323  17.162   6.887   6.001  -2.668  -2.738  H6E     44D  80  
44D  "H4'O"  "OH4'"  H  0  0  N  N  N   9.113  18.513   5.485   9.225  -1.881  -1.700  "H4'O"  44D  81  
44D  "H3'1"  "1H3'"  H  0  0  N  N  N   4.862  20.753   5.054   9.041  -0.240   2.627  "H3'1"  44D  82  
44D  "H3'2"  "2H3'"  H  0  0  N  N  N   6.526  20.973   5.355   9.415  -1.750   2.181  "H3'2"  44D  83  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
44D  C1     C2      DOUB  Y  N   1  
44D  C1     C15     SING  Y  N   2  
44D  C1     HC1     SING  N  N   3  
44D  C2     C3      SING  Y  N   4  
44D  C2     HC2     SING  N  N   5  
44D  C3     C4      DOUB  Y  N   6  
44D  C3     HC3     SING  N  N   7  
44D  C4     C16     SING  Y  N   8  
44D  C4     HC4     SING  N  N   9  
44D  C5     C16     SING  N  N  10  
44D  C5     C17     SING  N  N  11  
44D  C5     O5      DOUB  N  N  12  
44D  C6     C17     DOUB  Y  N  13  
44D  C6     C20     SING  Y  N  14  
44D  C6     O6      SING  N  N  15  
44D  C7     C8      SING  N  N  16  
44D  C7     C20     SING  N  N  17  
44D  C7     O7      SING  N  N  18  
44D  C7     HC7     SING  N  N  19  
44D  C8     C9      SING  N  N  20  
44D  C8     HC81    SING  N  N  21  
44D  C8     HC82    SING  N  N  22  
44D  C9     C10     SING  N  N  23  
44D  C9     C13     SING  N  N  24  
44D  C9     O9      SING  N  N  25  
44D  C10    C19     SING  N  N  26  
44D  C10    H101    SING  N  N  27  
44D  C10    H102    SING  N  N  28  
44D  C11    C18     DOUB  Y  N  29  
44D  C11    C19     SING  Y  N  30  
44D  C11    O11     SING  N  N  31  
44D  C12    C15     SING  N  N  32  
44D  C12    C18     SING  N  N  33  
44D  C12    O12     DOUB  N  N  34  
44D  C13    C14     SING  N  N  35  
44D  C13    O13     DOUB  N  N  36  
44D  C14    O14     SING  N  N  37  
44D  C14    H141    SING  N  N  38  
44D  C14    H142    SING  N  N  39  
44D  C15    C16     DOUB  Y  N  40  
44D  C17    C18     SING  Y  N  41  
44D  C19    C20     DOUB  Y  N  42  
44D  O6     HO6     SING  N  N  43  
44D  O7     C1B     SING  N  N  44  
44D  O9     HO9     SING  N  N  45  
44D  O11    H11     SING  N  N  46  
44D  O14    H14     SING  N  N  47  
44D  C1B    C2B     SING  N  N  48  
44D  C1B    O5B     SING  N  N  49  
44D  C1B    H1B     SING  N  N  50  
44D  C2B    C3B     SING  N  N  51  
44D  C2B    "H2'1"  SING  N  N  52  
44D  C2B    "H2'2"  SING  N  N  53  
44D  C3B    C4B     SING  N  N  54  
44D  C3B    "O3'"   SING  N  N  55  
44D  C3B    H3B     SING  N  N  56  
44D  C4B    C5B     SING  N  N  57  
44D  C4B    O4B     SING  N  N  58  
44D  C4B    H4B     SING  N  N  59  
44D  C5B    C6B     SING  N  N  60  
44D  C5B    O5B     SING  N  N  61  
44D  C5B    H5B     SING  N  N  62  
44D  C6B    "H6'1"  SING  N  N  63  
44D  C6B    "H6'2"  SING  N  N  64  
44D  C6B    "H6'3"  SING  N  N  65  
44D  "O3'"  "H3'O"  SING  N  N  66  
44D  O4B    "C1'"   SING  N  N  67  
44D  "C1'"  "C2'"   SING  N  N  68  
44D  "C1'"  "O5'"   SING  N  N  69  
44D  "C1'"  "H1'"   SING  N  N  70  
44D  "C2'"  "C3'"   SING  N  N  71  
44D  "C2'"  H2B     SING  N  N  72  
44D  "C2'"  H2D     SING  N  N  73  
44D  "C3'"  "C4'"   SING  N  N  74  
44D  "C3'"  "N3'"   SING  N  N  75  
44D  "C3'"  "H3'"   SING  N  N  76  
44D  "C4'"  "C5'"   SING  N  N  77  
44D  "C4'"  "O4'"   SING  N  N  78  
44D  "C4'"  "H4'"   SING  N  N  79  
44D  "C5'"  "C6'"   SING  N  N  80  
44D  "C5'"  "O5'"   SING  N  N  81  
44D  "C5'"  "H5'"   SING  N  N  82  
44D  "C6'"  H6B     SING  N  N  83  
44D  "C6'"  H6D     SING  N  N  84  
44D  "C6'"  H6E     SING  N  N  85  
44D  "O4'"  "H4'O"  SING  N  N  86  
44D  "N3'"  "H3'1"  SING  N  N  87  
44D  "N3'"  "H3'2"  SING  N  N  88  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
44D  SMILES            ACDLabs               10.04  "O=C2c1c(O)c6c(c(O)c1C(=O)c3ccccc23)CC(O)(C(=O)CO)CC6OC5OC(C(OC4OC(C)C(O)C(N)C4)C(O)C5)C"  
44D  SMILES_CANONICAL  CACTVS                3.341  "C[C@@H]1O[C@H](C[C@H](N)[C@@H]1O)O[C@@H]2[C@H](C)O[C@H](C[C@@H]2O)O[C@H]3C[C@@](O)(Cc4c(O)c5C(=O)c6ccccc6C(=O)c5c(O)c34)C(=O)CO"  
44D  SMILES            CACTVS                3.341  "C[CH]1O[CH](C[CH](N)[CH]1O)O[CH]2[CH](C)O[CH](C[CH]2O)O[CH]3C[C](O)(Cc4c(O)c5C(=O)c6ccccc6C(=O)c5c(O)c34)C(=O)CO"  
44D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H]1[C@H]([C@H](C[C@@H](O1)O[C@@H]2[C@@H](O[C@H](C[C@@H]2O)O[C@H]3C[C@@](Cc4c3c(c5c(c4O)C(=O)c6ccccc6C5=O)O)(C(=O)CO)O)C)N)O"  
44D  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1C(C(CC(O1)OC2C(OC(CC2O)OC3CC(Cc4c3c(c5c(c4O)C(=O)c6ccccc6C5=O)O)(C(=O)CO)O)C)N)O"  
44D  InChI             InChI                 1.03   "InChI=1S/C32H37NO13/c1-12-26(37)17(33)7-21(43-12)46-31-13(2)44-22(8-18(31)35)45-19-10-32(42,20(36)11-34)9-16-23(19)30(41)25-24(29(16)40)27(38)14-5-3-4-6-15(14)28(25)39/h3-6,12-13,17-19,21-22,26,31,34-35,37,40-42H,7-11,33H2,1-2H3/t12-,13-,17-,18-,19-,21-,22-,26+,31+,32-/m0/s1"  
44D  InChIKey          InChI                 1.03   VQHRZZISQVWPLK-UIRGBLDSSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
44D  "SYSTEMATIC NAME"  ACDLabs               10.04  "(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 4-O-(3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)-2,6-dideoxy-alpha-L-lyxo-hexopyranoside"  
44D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(7S,9S)-7-[(2R,4S,5S,6S)-5-[(2S,4S,5S,6S)-4-amino-5-hydroxy-6-methyl-oxan-2-yl]oxy-4-hydroxy-6-methyl-oxan-2-yl]oxy-6,9,11-trihydroxy-9-(2-hydroxyethanoyl)-8,10-dihydro-7H-tetracene-5,12-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
44D  "Create component"   2002-12-16  RCSB  
44D  "Modify descriptor"  2011-06-04  RCSB  
44D  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     44D
_pdbx_chem_comp_synonyms.name        "4'-(O-ALPHA-L-DAUNOSAMINYL)-4-DEMETHOXYDOXORUBICIN"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
