data_3ZD
# 
_chem_comp.id                                    3ZD 
_chem_comp.name                                  "(2R)-N-[(2S)-1-[(4-carbamimidoylphenyl)methylamino]-1-oxidanylidene-propan-2-yl]-3-phenyl-2-[(phenylmethyl)sulfonylamino]propanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H31 N5 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-03-16 
_chem_comp.pdbx_modified_date                    2016-01-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        521.631 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3ZD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4UFE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3ZD C1   C1   C 0 1 Y N N 13.745 -13.426 21.476 7.074  0.973  0.695  C1   3ZD 1  
3ZD C2   C2   C 0 1 Y N N 14.312 -12.260 20.966 6.193  -0.050 0.999  C2   3ZD 2  
3ZD C3   C3   C 0 1 N N N 15.428 -12.281 20.003 4.800  0.276  1.472  C3   3ZD 3  
3ZD N1   N1   N 0 1 N N N 16.753 -12.566 20.718 3.903  0.376  0.317  N1   3ZD 4  
3ZD C4   C4   C 0 1 Y N N 13.767 -11.041 21.446 6.586  -1.370 0.870  C4   3ZD 5  
3ZD C5   C5   C 0 1 Y N N 12.745 -11.095 22.340 7.860  -1.675 0.438  C5   3ZD 6  
3ZD C6   C6   C 0 1 Y N N 12.158 -12.236 22.855 8.753  -0.648 0.130  C6   3ZD 7  
3ZD C7   C7   C 0 1 N N N 11.069 -12.191 23.812 10.123 -0.968 -0.334 C7   3ZD 8  
3ZD N2   N2   N 0 1 N N N 10.723 -11.078 24.415 10.495 -2.210 -0.457 N2   3ZD 9  
3ZD C8   C8   C 0 1 Y N N 12.708 -13.448 22.381 8.351  0.681  0.261  C8   3ZD 10 
3ZD N3   N3   N 0 1 N N N 10.388 -13.322 24.116 11.002 0.048  -0.637 N3   3ZD 11 
3ZD C9   C9   C 0 1 N N N 17.296 -13.840 20.585 2.599  0.661  0.500  C9   3ZD 12 
3ZD C10  C10  C 0 1 N N S 18.623 -14.033 21.364 1.677  0.765  -0.688 C10  3ZD 13 
3ZD C11  C11  C 0 1 N N N 19.909 -14.158 20.471 2.170  1.872  -1.622 C11  3ZD 14 
3ZD N4   N4   N 0 1 N N N 18.613 -15.309 22.061 0.322  1.081  -0.228 N4   3ZD 15 
3ZD O1   O1   O 0 1 N N N 16.789 -14.769 19.924 2.167  0.835  1.620  O1   3ZD 16 
3ZD C14  C14  C 0 1 N N N 17.679 -15.581 22.973 -0.742 0.741  -0.982 C14  3ZD 17 
3ZD C15  C15  C 0 1 N N R 17.673 -16.899 23.646 -2.135 1.067  -0.509 C15  3ZD 18 
3ZD C16  C16  C 0 1 N N N 18.335 -16.711 25.071 -2.274 2.581  -0.335 C16  3ZD 19 
3ZD N5   N5   N 0 1 N N N 16.386 -17.421 23.956 -3.109 0.598  -1.498 N5   3ZD 20 
3ZD O2   O2   O 0 1 N N N 16.796 -14.758 23.261 -0.578 0.173  -2.041 O2   3ZD 21 
3ZD S1   S1   S 0 1 N N N 15.640 -18.273 22.765 -3.838 -0.877 -1.308 S1   3ZD 22 
3ZD C17  C17  C 0 1 N N N 15.154 -17.070 21.438 -4.834 -0.698 0.197  C17  3ZD 23 
3ZD O4   O4   O 0 1 N N N 16.685 -19.247 22.318 -4.676 -1.003 -2.449 O4   3ZD 24 
3ZD O5   O5   O 0 1 N N N 14.409 -18.847 23.377 -2.759 -1.775 -1.088 O5   3ZD 25 
3ZD C18  C18  C 0 1 Y N N 11.907 -18.563 19.121 -6.611 -4.455 1.184  C18  3ZD 26 
3ZD C19  C19  C 0 1 Y N N 13.238 -18.864 18.793 -5.368 -4.124 1.690  C19  3ZD 27 
3ZD C20  C20  C 0 1 Y N N 14.330 -18.385 19.541 -4.793 -2.909 1.370  C20  3ZD 28 
3ZD C21  C21  C 0 1 Y N N 14.069 -17.579 20.654 -5.461 -2.023 0.545  C21  3ZD 29 
3ZD C22  C22  C 0 1 Y N N 12.726 -17.272 20.985 -6.705 -2.354 0.039  C22  3ZD 30 
3ZD C23  C23  C 0 1 Y N N 11.652 -17.764 20.218 -7.279 -3.570 0.358  C23  3ZD 31 
3ZD C24  C24  C 0 1 Y N N 22.236 -14.869 24.943 -6.085 3.475  1.375  C24  3ZD 32 
3ZD C25  C25  C 0 1 Y N N 21.147 -14.211 25.558 -4.980 3.323  2.191  C25  3ZD 33 
3ZD C26  C26  C 0 1 Y N N 19.892 -14.798 25.610 -3.747 3.033  1.638  C26  3ZD 34 
3ZD C27  C27  C 0 1 Y N N 19.674 -16.070 25.039 -3.619 2.896  0.268  C27  3ZD 35 
3ZD C28  C28  C 0 1 Y N N 20.764 -16.737 24.419 -4.724 3.048  -0.548 C28  3ZD 36 
3ZD C29  C29  C 0 1 Y N N 22.035 -16.114 24.395 -5.957 3.338  0.005  C29  3ZD 37 
3ZD H1   H1   H 0 1 N N N 14.144 -14.372 21.140 6.760  2.001  0.793  H1   3ZD 38 
3ZD H8   H8   H 0 1 N N N 12.315 -14.392 22.729 9.038  1.480  0.024  H8   3ZD 39 
3ZD H31C H31C H 0 0 N N N 15.245 -13.066 19.255 4.448  -0.513 2.137  H31C 3ZD 40 
3ZD H32C H32C H 0 0 N N N 15.491 -11.304 19.501 4.810  1.225  2.007  H32C 3ZD 41 
3ZD H4   H4   H 0 1 N N N 14.156 -10.092 21.108 5.894  -2.164 1.108  H4   3ZD 42 
3ZD HA   HA   H 0 1 N N N 17.211 -11.862 21.261 4.249  0.237  -0.579 HA   3ZD 43 
3ZD H5   H5   H 0 1 N N N 12.351 -10.150 22.683 8.166  -2.706 0.338  H5   3ZD 44 
3ZD H2   H2   H 0 1 N N N 9.964  -11.217 25.052 11.392 -2.420 -0.761 H2   3ZD 45 
3ZD H31N H31N H 0 0 N N N 9.644  -13.294 24.784 10.725 0.973  -0.546 H31N 3ZD 46 
3ZD H32N H32N H 0 0 N N N 10.629 -14.185 23.673 11.899 -0.162 -0.942 H32N 3ZD 47 
3ZD H10  H10  H 0 1 N N N 18.755 -13.202 22.073 1.666  -0.185 -1.223 H10  3ZD 48 
3ZD H111 H111 H 0 0 N N N 20.791 -14.291 21.114 1.503  1.946  -2.481 H111 3ZD 49 
3ZD H112 H112 H 0 0 N N N 19.808 -15.026 19.803 2.181  2.821  -1.086 H112 3ZD 50 
3ZD H113 H113 H 0 0 N N N 20.028 -13.244 19.870 3.178  1.636  -1.964 H113 3ZD 51 
3ZD HB   HB   H 0 1 N N N 19.315 -15.991 21.854 0.191  1.536  0.619  HB   3ZD 52 
3ZD H15  H15  H 0 1 N N N 18.267 -17.624 23.070 -2.320 0.573  0.445  H15  3ZD 53 
3ZD H161 H161 H 0 0 N N N 17.667 -16.086 25.682 -1.486 2.944  0.324  H161 3ZD 54 
3ZD H162 H162 H 0 0 N N N 18.438 -17.702 25.537 -2.189 3.068  -1.307 H162 3ZD 55 
3ZD HC   HC   H 0 1 N N N 16.485 -18.025 24.747 -3.326 1.151  -2.265 HC   3ZD 56 
3ZD H171 H171 H 0 0 N N N 14.846 -16.123 21.906 -4.197 -0.371 1.018  H171 3ZD 57 
3ZD H172 H172 H 0 0 N N N 16.018 -16.890 20.782 -5.618 0.041  0.029  H172 3ZD 58 
3ZD H18  H18  H 0 1 N N N 11.094 -18.950 18.524 -7.058 -5.407 1.430  H18  3ZD 59 
3ZD H19  H19  H 0 1 N N N 13.432 -19.488 17.933 -4.846 -4.816 2.335  H19  3ZD 60 
3ZD H23  H23  H 0 1 N N N 10.635 -17.518 20.486 -8.251 -3.829 -0.037 H23  3ZD 61 
3ZD H20  H20  H 0 1 N N N 15.343 -18.633 19.263 -3.822 -2.650 1.766  H20  3ZD 62 
3ZD H22  H22  H 0 1 N N N 12.522 -16.648 21.843 -7.227 -1.663 -0.605 H22  3ZD 63 
3ZD H24  H24  H 0 1 N N N 23.209 -14.402 24.904 -7.049 3.696  1.808  H24  3ZD 64 
3ZD H25  H25  H 0 1 N N N 21.295 -13.234 25.995 -5.080 3.430  3.261  H25  3ZD 65 
3ZD H29  H29  H 0 1 N N N 22.866 -16.629 23.936 -6.821 3.457  -0.632 H29  3ZD 66 
3ZD H26  H26  H 0 1 N N N 19.076 -14.279 26.091 -2.883 2.915  2.275  H26  3ZD 67 
3ZD H28  H28  H 0 1 N N N 20.625 -17.710 23.970 -4.624 2.942  -1.618 H28  3ZD 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3ZD C1  C2   SING Y N 1  
3ZD C1  C8   DOUB Y N 2  
3ZD C2  C3   SING N N 3  
3ZD C2  C4   DOUB Y N 4  
3ZD C3  N1   SING N N 5  
3ZD N1  C9   SING N N 6  
3ZD C4  C5   SING Y N 7  
3ZD C5  C6   DOUB Y N 8  
3ZD C6  C7   SING N N 9  
3ZD C6  C8   SING Y N 10 
3ZD C7  N2   DOUB N N 11 
3ZD C7  N3   SING N N 12 
3ZD C9  C10  SING N N 13 
3ZD C9  O1   DOUB N N 14 
3ZD C10 C11  SING N N 15 
3ZD C10 N4   SING N N 16 
3ZD N4  C14  SING N N 17 
3ZD C14 C15  SING N N 18 
3ZD C14 O2   DOUB N N 19 
3ZD C15 C16  SING N N 20 
3ZD C15 N5   SING N N 21 
3ZD C16 C27  SING N N 22 
3ZD N5  S1   SING N N 23 
3ZD S1  C17  SING N N 24 
3ZD S1  O4   DOUB N N 25 
3ZD S1  O5   DOUB N N 26 
3ZD C17 C21  SING N N 27 
3ZD C18 C19  SING Y N 28 
3ZD C18 C23  DOUB Y N 29 
3ZD C19 C20  DOUB Y N 30 
3ZD C20 C21  SING Y N 31 
3ZD C21 C22  DOUB Y N 32 
3ZD C22 C23  SING Y N 33 
3ZD C24 C25  SING Y N 34 
3ZD C24 C29  DOUB Y N 35 
3ZD C25 C26  DOUB Y N 36 
3ZD C26 C27  SING Y N 37 
3ZD C27 C28  DOUB Y N 38 
3ZD C28 C29  SING Y N 39 
3ZD C1  H1   SING N N 40 
3ZD C8  H8   SING N N 41 
3ZD C3  H31C SING N N 42 
3ZD C3  H32C SING N N 43 
3ZD C4  H4   SING N N 44 
3ZD N1  HA   SING N N 45 
3ZD C5  H5   SING N N 46 
3ZD N2  H2   SING N N 47 
3ZD N3  H31N SING N N 48 
3ZD N3  H32N SING N N 49 
3ZD C10 H10  SING N N 50 
3ZD C11 H111 SING N N 51 
3ZD C11 H112 SING N N 52 
3ZD C11 H113 SING N N 53 
3ZD N4  HB   SING N N 54 
3ZD C15 H15  SING N N 55 
3ZD C16 H161 SING N N 56 
3ZD C16 H162 SING N N 57 
3ZD N5  HC   SING N N 58 
3ZD C17 H171 SING N N 59 
3ZD C17 H172 SING N N 60 
3ZD C18 H18  SING N N 61 
3ZD C19 H19  SING N N 62 
3ZD C23 H23  SING N N 63 
3ZD C20 H20  SING N N 64 
3ZD C22 H22  SING N N 65 
3ZD C24 H24  SING N N 66 
3ZD C25 H25  SING N N 67 
3ZD C29 H29  SING N N 68 
3ZD C26 H26  SING N N 69 
3ZD C28 H28  SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3ZD InChI            InChI                1.03  
"InChI=1S/C27H31N5O4S/c1-19(26(33)30-17-21-12-14-23(15-13-21)25(28)29)31-27(34)24(16-20-8-4-2-5-9-20)32-37(35,36)18-22-10-6-3-7-11-22/h2-15,19,24,32H,16-18H2,1H3,(H3,28,29)(H,30,33)(H,31,34)/t19-,24+/m0/s1" 
3ZD InChIKey         InChI                1.03  HERCRKHUDSPBLM-YADARESESA-N 
3ZD SMILES_CANONICAL CACTVS               3.385 "C[C@H](NC(=O)[C@@H](Cc1ccccc1)N[S](=O)(=O)Cc2ccccc2)C(=O)NCc3ccc(cc3)C(N)=N" 
3ZD SMILES           CACTVS               3.385 "C[CH](NC(=O)[CH](Cc1ccccc1)N[S](=O)(=O)Cc2ccccc2)C(=O)NCc3ccc(cc3)C(N)=N" 
3ZD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(\c1ccc(cc1)CNC(=O)[C@H](C)NC(=O)[C@@H](Cc2ccccc2)NS(=O)(=O)Cc3ccccc3)/N" 
3ZD SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C(=O)NCc1ccc(cc1)C(=N)N)NC(=O)C(Cc2ccccc2)NS(=O)(=O)Cc3ccccc3" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3ZD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R)-N-[(2S)-1-[(4-carbamimidoylphenyl)methylamino]-1-oxidanylidene-propan-2-yl]-3-phenyl-2-[(phenylmethyl)sulfonylamino]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3ZD "Create component" 2015-03-16 EBI  
3ZD "Initial release"  2016-01-27 RCSB 
# 
