data_2ND
# 
_chem_comp.id                                    2ND 
_chem_comp.name                                  "2'-DEOXYINOSINE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H12 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2005-03-15 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        252.227 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2ND 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1Z39 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2ND O6     O6   O 0 1 N N N -18.325 -43.293 -12.156 -4.643 1.213  -0.733 O6     2ND 1  
2ND C6     C6   C 0 1 N N N -17.962 -42.535 -11.258 -3.852 0.429  -0.236 C6     2ND 2  
2ND N1     N1   N 0 1 N N N -18.278 -41.171 -11.310 -4.283 -0.697 0.375  N1     2ND 3  
2ND C2     C2   C 0 1 N N N -17.840 -40.327 -10.282 -3.394 -1.563 0.925  C2     2ND 4  
2ND N3     N3   N 0 1 N N N -17.138 -40.818 -9.275  -2.108 -1.353 0.889  N3     2ND 5  
2ND C4     C4   C 0 1 Y N N -16.822 -42.120 -9.192  -1.597 -0.264 0.296  C4     2ND 6  
2ND C5     C5   C 0 1 Y N N -17.224 -43.011 -10.180 -2.457 0.673  -0.284 C5     2ND 7  
2ND N7     N7   N 0 1 Y N N -16.786 -44.216 -9.830  -1.688 1.662  -0.796 N7     2ND 8  
2ND C8     C8   C 0 1 Y N N -16.140 -44.095 -8.674  -0.435 1.396  -0.564 C8     2ND 9  
2ND N9     N9   N 0 1 Y N N -16.158 -42.825 -8.278  -0.330 0.217  0.112  N9     2ND 10 
2ND "C1'"  C1*  C 0 1 N N R -15.576 -42.327 -7.008  0.912  -0.421 0.554  "C1'"  2ND 11 
2ND "O4'"  O4*  O 0 1 N N N -16.297 -42.857 -5.881  1.949  0.566  0.683  "O4'"  2ND 12 
2ND "C2'"  C2*  C 0 1 N N N -15.608 -40.799 -6.884  1.383  -1.444 -0.498 "C2'"  2ND 13 
2ND "C3'"  C3*  C 0 1 N N S -16.044 -40.603 -5.432  2.800  -0.960 -0.895 "C3'"  2ND 14 
2ND "O3'"  O3*  O 0 1 N N N -14.924 -40.713 -4.550  3.696  -2.065 -1.036 "O3'"  2ND 15 
2ND "C4'"  C4*  C 0 1 N N R -17.009 -41.775 -5.256  3.190  -0.076 0.317  "C4'"  2ND 16 
2ND "C5'"  C5*  C 0 1 N N N -18.348 -41.562 -5.967  4.235  0.965  -0.090 "C5'"  2ND 17 
2ND "O5'"  O5*  O 0 1 N N N -19.093 -42.782 -5.940  4.625  1.722  1.058  "O5'"  2ND 18 
2ND HN1    HN1  H 0 1 N N N -18.821 -40.796 -12.088 -5.233 -0.888 0.422  HN1    2ND 19 
2ND H2     H2   H 0 1 N N N -18.054 -39.245 -10.265 -3.764 -2.455 1.408  H2     2ND 20 
2ND H8     H8   H 0 1 N N N -15.661 -44.924 -8.126  0.397  2.017  -0.863 H8     2ND 21 
2ND "H1'"  H1*  H 0 1 N N N -14.514 -42.667 -7.017  0.753  -0.918 1.510  "H1'"  2ND 22 
2ND "H2'1" 1H2* H 0 0 N N N -16.240 -40.278 -7.640  1.431  -2.443 -0.063 "H2'1" 2ND 23 
2ND "H2'2" 2H2* H 0 0 N N N -14.660 -40.283 -7.165  0.719  -1.436 -1.362 "H2'2" 2ND 24 
2ND "H3'"  H3*  H 0 1 N N N -16.492 -39.607 -5.209  2.767  -0.369 -1.810 "H3'"  2ND 25 
2ND H1     H1   H 0 1 N N N -15.195 -40.591 -3.648  3.344  -2.620 -1.745 H1     2ND 26 
2ND "H4'"  H4*  H 0 1 N N N -17.275 -41.937 -4.185  3.561  -0.690 1.137  "H4'"  2ND 27 
2ND "H5'1" 1H5* H 0 0 N N N -18.220 -41.167 -7.002  3.811  1.633  -0.839 "H5'1" 2ND 28 
2ND "H5'2" 2H5* H 0 0 N N N -18.922 -40.706 -5.542  5.108  0.460  -0.505 "H5'2" 2ND 29 
2ND "H5'"  H5*  H 0 1 N N N -19.924 -42.650 -6.381  5.283  2.365  0.759  "H5'"  2ND 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2ND O6    C6     DOUB N N 1  
2ND C6    N1     SING N N 2  
2ND C6    C5     SING N N 3  
2ND N1    C2     SING N N 4  
2ND N1    HN1    SING N N 5  
2ND C2    N3     DOUB N N 6  
2ND C2    H2     SING N N 7  
2ND N3    C4     SING N N 8  
2ND C4    C5     DOUB Y N 9  
2ND C4    N9     SING Y N 10 
2ND C5    N7     SING Y N 11 
2ND N7    C8     DOUB Y N 12 
2ND C8    N9     SING Y N 13 
2ND C8    H8     SING N N 14 
2ND N9    "C1'"  SING N N 15 
2ND "C1'" "O4'"  SING N N 16 
2ND "C1'" "C2'"  SING N N 17 
2ND "C1'" "H1'"  SING N N 18 
2ND "O4'" "C4'"  SING N N 19 
2ND "C2'" "C3'"  SING N N 20 
2ND "C2'" "H2'1" SING N N 21 
2ND "C2'" "H2'2" SING N N 22 
2ND "C3'" "O3'"  SING N N 23 
2ND "C3'" "C4'"  SING N N 24 
2ND "C3'" "H3'"  SING N N 25 
2ND "O3'" H1     SING N N 26 
2ND "C4'" "C5'"  SING N N 27 
2ND "C4'" "H4'"  SING N N 28 
2ND "C5'" "O5'"  SING N N 29 
2ND "C5'" "H5'1" SING N N 30 
2ND "C5'" "H5'2" SING N N 31 
2ND "O5'" "H5'"  SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2ND SMILES           ACDLabs              10.04 "O=C1c2ncn(c2N=CN1)C3OC(C(O)C3)CO"                                                                                        
2ND SMILES_CANONICAL CACTVS               3.341 "OC[C@H]1O[C@H](C[C@@H]1O)n2cnc3C(=O)NC=Nc23"                                                                             
2ND SMILES           CACTVS               3.341 "OC[CH]1O[CH](C[CH]1O)n2cnc3C(=O)NC=Nc23"                                                                                 
2ND SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO)O)N=CNC2=O"                                                                           
2ND SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3CC(C(O3)CO)O)N=CNC2=O"                                                                                        
2ND InChI            InChI                1.03  "InChI=1S/C10H12N4O4/c15-2-6-5(16)1-7(18-6)14-4-13-8-9(14)11-3-12-10(8)17/h3-7,15-16H,1-2H2,(H,11,12,17)/t5-,6+,7+/m0/s1" 
2ND InChIKey         InChI                1.03  VGONTNSXDCQUGY-RRKCRQDMSA-N                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2ND "SYSTEMATIC NAME" ACDLabs              10.04 "2'-deoxyinosine"                                                      
2ND "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "9-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1H-purin-6-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2ND "Create component"  2005-03-15 RCSB 
2ND "Modify descriptor" 2011-06-04 RCSB 
# 
