data_24D
#

_chem_comp.id                                   24D
_chem_comp.name                                 "N-(2,4-dichlorobenzyl)-4-(pyrimidin-2-yloxy)piperidine-1-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H18 Cl2 N4 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4-(Pyrimidin-2-yloxy)-piperidine-1-carboxylic acid 2,4-dichloro-benzylamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-11-20
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       381.256
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    24D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3KOO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
24D  CL1   CL1   CL  0  0  N  N  N  75.801   -8.422  71.504   6.652  -2.604  -0.384  CL1   24D   1  
24D  C2    C2    C   0  1  Y  N  N  75.126   -8.805  69.935   5.505  -1.301  -0.338  C2    24D   2  
24D  C3    C3    C   0  1  Y  N  N  75.218   -7.883  68.899   5.371  -0.459  -1.428  C3    24D   3  
24D  C4    C4    C   0  1  Y  N  N  74.684   -8.172  67.647   4.458   0.579  -1.392  C4    24D   4  
24D  C5    C5    C   0  1  Y  N  N  74.048   -9.379  67.410   3.680   0.776  -0.267  C5    24D   5  
24D  C6    C6    C   0  1  N  N  N  73.459   -9.749  66.071   2.685   1.907  -0.228  C6    24D   6  
24D  N7    N7    N   0  1  N  N  N  73.558   -8.637  65.125   1.331   1.373  -0.392  N7    24D   7  
24D  C8    C8    C   0  1  N  N  N  74.688   -8.502  64.416   0.272   2.207  -0.389  C8    24D   8  
24D  O9    O9    O   0  1  N  N  N  75.584   -9.284  64.577   0.431   3.390  -0.161  O9    24D   9  
24D  N10   N10   N   0  1  N  N  N  74.841   -7.527  63.520  -0.963   1.729  -0.640  N10   24D  10  
24D  C11   C11   C   0  1  N  N  N  76.105   -7.406  62.777  -2.109   2.641  -0.753  C11   24D  11  
24D  C12   C12   C   0  1  N  N  N  75.792   -7.107  61.306  -3.207   2.175   0.209  C12   24D  12  
24D  C13   C13   C   0  1  N  N  N  74.826   -5.914  61.187  -3.540   0.709  -0.075  C13   24D  13  
24D  C14   C14   C   0  1  N  N  N  74.376   -5.370  62.547  -2.296  -0.153   0.157  C14   24D  14  
24D  C15   C15   C   0  1  N  N  N  73.769   -6.555  63.301  -1.187   0.287  -0.811  C15   24D  15  
24D  O16   O16   O   0  1  N  N  N  75.426   -4.866  60.415  -4.586   0.280   0.799  O16   24D  16  
24D  C17   C17   C   0  1  Y  N  N  76.487   -4.148  60.860  -5.418  -0.684   0.336  C17   24D  17  
24D  N18   N18   N   0  1  Y  N  N  77.235   -4.594  61.857  -6.402  -1.113   1.110  N18   24D  18  
24D  C19   C19   C   0  1  Y  N  N  78.270   -3.897  62.282  -7.232  -2.053   0.689  C19   24D  19  
24D  C20   C20   C   0  1  Y  N  N  78.554   -2.695  61.653  -7.061  -2.588  -0.578  C20   24D  20  
24D  C21   C21   C   0  1  Y  N  N  77.757   -2.256  60.606  -6.020  -2.115  -1.361  C21   24D  21  
24D  N22   N22   N   0  1  Y  N  N  76.740   -3.009  60.237  -5.229  -1.170  -0.880  N22   24D  22  
24D  C23   C23   C   0  1  Y  N  N  73.956  -10.293  68.429   3.813  -0.066   0.823  C23   24D  23  
24D  CL24  CL24  CL  0  0  N  N  N  73.147  -11.779  68.041   2.833   0.181   2.235  CL24  24D  24  
24D  C25   C25   C   0  1  Y  N  N  74.490  -10.020  69.691   4.722  -1.107   0.786  C25   24D  25  
24D  H3    H3    H   0  1  N  N  N  75.708   -6.935  69.067   5.980  -0.612  -2.307  H3    24D  26  
24D  H4    H4    H   0  1  N  N  N  74.766   -7.447  66.851   4.354   1.236  -2.243  H4    24D  27  
24D  H6    H6    H   0  1  N  N  N  74.008  -10.612  65.666   2.759   2.423   0.729  H6    24D  28  
24D  H6A   H6A   H   0  1  N  N  N  72.399  -10.008  66.207   2.899   2.607  -1.036  H6A   24D  29  
24D  HN7   HN7   H   0  1  N  N  N  72.801   -7.993  65.010   1.196   0.418  -0.502  HN7   24D  30  
24D  H11   H11   H   0  1  N  N  N  76.706   -6.588  63.201  -1.799   3.652  -0.491  H11   24D  31  
24D  H11A  H11A  H   0  0  N  N  N  76.669   -8.348  62.851  -2.489   2.626  -1.775  H11A  24D  32  
24D  H12   H12   H   0  1  N  N  N  76.728   -6.865  60.781  -2.857   2.277   1.236  H12   24D  33  
24D  H12A  H12A  H   0  0  N  N  N  75.326   -7.993  60.850  -4.099   2.785   0.065  H12A  24D  34  
24D  H13   H13   H   0  1  N  N  N  73.925   -6.287  60.677  -3.866   0.604  -1.110  H13   24D  35  
24D  H14   H14   H   0  1  N  N  N  75.232   -4.957  63.101  -1.955  -0.029   1.185  H14   24D  36  
24D  H14A  H14A  H   0  0  N  N  N  73.630   -4.572  62.417  -2.540  -1.200  -0.022  H14A  24D  37  
24D  H15   H15   H   0  1  N  N  N  72.961   -7.008  62.709  -1.493   0.084  -1.837  H15   24D  38  
24D  H15A  H15A  H   0  0  N  N  N  73.356   -6.221  64.264  -0.269  -0.255  -0.587  H15A  24D  39  
24D  H19   H19   H   0  1  N  N  N  78.880   -4.253  63.099  -8.033  -2.400   1.325  H19   24D  40  
24D  H20   H20   H   0  1  N  N  N  79.395   -2.101  61.978  -7.724  -3.357  -0.947  H20   24D  41  
24D  H21   H21   H   0  1  N  N  N  77.964   -1.321  60.106  -5.859  -2.510  -2.353  H21   24D  42  
24D  H25   H25   H   0  1  N  N  N  74.409  -10.753  70.480   4.824  -1.767   1.635  H25   24D  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
24D  CL1  C2    SING  N  N   1  
24D  C2   C3    DOUB  Y  N   2  
24D  C2   C25   SING  Y  N   3  
24D  C3   C4    SING  Y  N   4  
24D  C4   C5    DOUB  Y  N   5  
24D  C5   C6    SING  N  N   6  
24D  C5   C23   SING  Y  N   7  
24D  C6   N7    SING  N  N   8  
24D  N7   C8    SING  N  N   9  
24D  C8   O9    DOUB  N  N  10  
24D  C8   N10   SING  N  N  11  
24D  N10  C11   SING  N  N  12  
24D  N10  C15   SING  N  N  13  
24D  C11  C12   SING  N  N  14  
24D  C12  C13   SING  N  N  15  
24D  C13  C14   SING  N  N  16  
24D  C13  O16   SING  N  N  17  
24D  C14  C15   SING  N  N  18  
24D  O16  C17   SING  N  N  19  
24D  C17  N18   DOUB  Y  N  20  
24D  C17  N22   SING  Y  N  21  
24D  N18  C19   SING  Y  N  22  
24D  C19  C20   DOUB  Y  N  23  
24D  C20  C21   SING  Y  N  24  
24D  C21  N22   DOUB  Y  N  25  
24D  C23  CL24  SING  N  N  26  
24D  C23  C25   DOUB  Y  N  27  
24D  C3   H3    SING  N  N  28  
24D  C4   H4    SING  N  N  29  
24D  C6   H6    SING  N  N  30  
24D  C6   H6A   SING  N  N  31  
24D  N7   HN7   SING  N  N  32  
24D  C11  H11   SING  N  N  33  
24D  C11  H11A  SING  N  N  34  
24D  C12  H12   SING  N  N  35  
24D  C12  H12A  SING  N  N  36  
24D  C13  H13   SING  N  N  37  
24D  C14  H14   SING  N  N  38  
24D  C14  H14A  SING  N  N  39  
24D  C15  H15   SING  N  N  40  
24D  C15  H15A  SING  N  N  41  
24D  C19  H19   SING  N  N  42  
24D  C20  H20   SING  N  N  43  
24D  C21  H21   SING  N  N  44  
24D  C25  H25   SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
24D  SMILES_CANONICAL  CACTVS                3.352  "Clc1ccc(CNC(=O)N2CCC(CC2)Oc3ncccn3)c(Cl)c1"  
24D  SMILES            CACTVS                3.352  "Clc1ccc(CNC(=O)N2CCC(CC2)Oc3ncccn3)c(Cl)c1"  
24D  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "c1cnc(nc1)OC2CCN(CC2)C(=O)NCc3ccc(cc3Cl)Cl"  
24D  SMILES            "OpenEye OEToolkits"  1.7.0  "c1cnc(nc1)OC2CCN(CC2)C(=O)NCc3ccc(cc3Cl)Cl"  
24D  InChI             InChI                 1.03   "InChI=1S/C17H18Cl2N4O2/c18-13-3-2-12(15(19)10-13)11-22-17(24)23-8-4-14(5-9-23)25-16-20-6-1-7-21-16/h1-3,6-7,10,14H,4-5,8-9,11H2,(H,22,24)"  
24D  InChIKey          InChI                 1.03   UZEPPAOAIDTLTK-UHFFFAOYSA-N  
#
_pdbx_chem_comp_identifier.comp_id          24D
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  1.6.1
_pdbx_chem_comp_identifier.identifier       "N-[(2,4-dichlorophenyl)methyl]-4-pyrimidin-2-yloxy-piperidine-1-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
24D  "Create component"      2009-11-20  RCSB  
24D  "Modify aromatic_flag"  2011-06-04  RCSB  
24D  "Modify descriptor"     2011-06-04  RCSB  
24D  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     24D
_pdbx_chem_comp_synonyms.name        "4-(Pyrimidin-2-yloxy)-piperidine-1-carboxylic acid 2,4-dichloro-benzylamide"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
