data_YTC
#

_chem_comp.id                                   YTC
_chem_comp.name                                 "(3~{S},4~{S})-4-(1,3-benzodioxol-5-ylmethyl)-3-[(3,4,5-trimethoxyphenyl)methyl]oxolan-2-one"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H24 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-18
_chem_comp.pdbx_modified_date                   2021-12-10
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       400.422
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YTC
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7E38
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YTC  C01  C1   C  0  1  N  N  N  -17.820  15.958  -18.622  -4.769   2.854  -1.412  C01  YTC   1  
YTC  C03  C2   C  0  1  Y  N  N  -19.220  17.077  -20.156  -4.465   0.600  -0.716  C03  YTC   2  
YTC  C04  C3   C  0  1  Y  N  N  -18.680  18.282  -19.726  -3.108   0.772  -0.946  C04  YTC   3  
YTC  C05  C4   C  0  1  Y  N  N  -18.990  19.461  -20.387  -2.230  -0.271  -0.719  C05  YTC   4  
YTC  C06  C5   C  0  1  Y  N  N  -19.851  19.433  -21.477  -2.699  -1.488  -0.261  C06  YTC   5  
YTC  C07  C6   C  0  1  Y  N  N  -20.394  18.226  -21.906  -4.054  -1.667  -0.029  C07  YTC   6  
YTC  C08  C7   C  0  1  Y  N  N  -20.076  17.052  -21.246  -4.940  -0.620  -0.251  C08  YTC   7  
YTC  C10  C8   C  0  1  N  N  N  -19.886  15.212  -22.695  -6.750  -0.487   1.288  C10  YTC   8  
YTC  C12  C9   C  0  1  N  N  N  -22.147  19.250  -23.105  -3.547  -3.895   0.633  C12  YTC   9  
YTC  C13  C10  C  0  1  N  N  N  -18.394  20.789  -19.904  -0.756  -0.080  -0.971  C13  YTC  10  
YTC  C14  C11  C  0  1  N  N  S  -16.837  20.803  -20.051  -0.082   0.429   0.305  C14  YTC  11  
YTC  C15  C12  C  0  1  N  N  S  -16.356  22.141  -20.495   1.438   0.592   0.083  C15  YTC  12  
YTC  C16  C13  C  0  1  N  N  N  -15.062  22.407  -19.684   1.663   2.102   0.311  C16  YTC  13  
YTC  C18  C14  C  0  1  N  N  N  -16.213  20.602  -18.729  -0.572   1.823   0.641  C18  YTC  14  
YTC  C20  C15  C  0  1  N  N  N  -16.018  22.157  -21.971   2.225  -0.232   1.103  C20  YTC  15  
YTC  C21  C16  C  0  1  Y  N  N  -17.302  22.099  -22.797   3.696  -0.151   0.786  C21  YTC  16  
YTC  C22  C17  C  0  1  Y  N  N  -17.448  21.120  -23.773   4.270  -1.075  -0.068  C22  YTC  17  
YTC  C23  C18  C  0  1  Y  N  N  -18.639  21.060  -24.537   5.621  -1.000  -0.364  C23  YTC  18  
YTC  C24  C19  C  0  1  Y  N  N  -19.643  21.960  -24.314   6.399   0.009   0.199  C24  YTC  19  
YTC  C25  C20  C  0  1  Y  N  N  -19.494  22.958  -23.316   5.817   0.932   1.053  C25  YTC  20  
YTC  C26  C21  C  0  1  Y  N  N  -18.325  23.018  -22.567   4.468   0.850   1.345  C26  YTC  21  
YTC  C28  C22  C  0  1  N  N  N  -20.167  20.800  -26.173   7.599  -0.985  -1.400  C28  YTC  22  
YTC  O02  O1   O  0  1  N  N  N  -18.910  15.881  -19.498  -5.329   1.627  -0.940  O02  YTC  23  
YTC  O09  O2   O  0  1  N  N  N  -20.626  15.841  -21.685  -6.271  -0.792  -0.024  O09  YTC  24  
YTC  O11  O3   O  0  1  N  N  N  -21.258  18.175  -23.008  -4.515  -2.865   0.421  O11  YTC  25  
YTC  O17  O4   O  0  1  N  N  N  -14.966  21.385  -18.723   0.339   2.706   0.192  O17  YTC  26  
YTC  O19  O5   O  0  1  N  N  N  -16.625  19.937  -17.839  -1.601   2.095   1.212  O19  YTC  27  
YTC  O27  O6   O  0  1  N  N  N  -20.701  21.668  -25.209   7.682  -0.131  -0.244  O27  YTC  28  
YTC  O29  O7   O  0  1  N  N  N  -19.052  20.191  -25.575   6.418  -1.772  -1.160  O29  YTC  29  
YTC  H1   H1   H  0  1  N  N  N  -17.654  14.976  -18.155  -4.051   3.230  -0.684  H1   YTC  30  
YTC  H2   H2   H  0  1  N  N  N  -16.920  16.255  -19.181  -4.266   2.682  -2.363  H2   YTC  31  
YTC  H3   H3   H  0  1  N  N  N  -18.029  16.704  -17.841  -5.564   3.587  -1.549  H3   YTC  32  
YTC  H4   H4   H  0  1  N  N  N  -18.016  18.301  -18.874  -2.738   1.721  -1.303  H4   YTC  33  
YTC  H5   H5   H  0  1  N  N  N  -20.099  20.349  -21.992  -2.009  -2.300  -0.084  H5   YTC  34  
YTC  H6   H6   H  0  1  N  N  N  -20.382  14.273  -22.983  -7.824  -0.668   1.333  H6   YTC  35  
YTC  H7   H7   H  0  1  N  N  N  -19.822  15.876  -23.570  -6.244  -1.121   2.016  H7   YTC  36  
YTC  H8   H8   H  0  1  N  N  N  -18.873  14.994  -22.325  -6.547   0.559   1.515  H8   YTC  37  
YTC  H9   H9   H  0  1  N  N  N  -22.781  19.123  -23.995  -4.046  -4.795   0.990  H9   YTC  38  
YTC  H10  H10  H  0  1  N  N  N  -22.780  19.284  -22.206  -3.036  -4.111  -0.305  H10  YTC  39  
YTC  H11  H11  H  0  1  N  N  N  -21.579  20.188  -23.190  -2.820  -3.563   1.375  H11  YTC  40  
YTC  H12  H12  H  0  1  N  N  N  -18.817  21.610  -20.502  -0.311  -1.032  -1.262  H12  YTC  41  
YTC  H13  H13  H  0  1  N  N  N  -18.655  20.934  -18.845  -0.615   0.647  -1.771  H13  YTC  42  
YTC  H14  H14  H  0  1  N  N  N  -16.523  20.021  -20.758  -0.276  -0.252   1.134  H14  YTC  43  
YTC  H15  H15  H  0  1  N  N  N  -17.103  22.916  -20.267   1.711   0.312  -0.935  H15  YTC  44  
YTC  H16  H16  H  0  1  N  N  N  -14.187  22.384  -20.350   2.071   2.278   1.307  H16  YTC  45  
YTC  H17  H17  H  0  1  N  N  N  -15.120  23.388  -19.189   2.332   2.505  -0.449  H17  YTC  46  
YTC  H18  H18  H  0  1  N  N  N  -15.390  21.287  -22.211   2.047   0.161   2.103  H18  YTC  47  
YTC  H19  H19  H  0  1  N  N  N  -15.471  23.081  -22.210   1.901  -1.272   1.058  H19  YTC  48  
YTC  H20  H20  H  0  1  N  N  N  -16.656  20.407  -23.948   3.665  -1.857  -0.503  H20  YTC  49  
YTC  H21  H21  H  0  1  N  N  N  -20.287  23.669  -23.139   6.418   1.715   1.491  H21  YTC  50  
YTC  H22  H22  H  0  1  N  N  N  -18.209  23.776  -21.807   4.016   1.573   2.008  H22  YTC  51  
YTC  H23  H23  H  0  1  N  N  N  -19.860  21.364  -27.066   7.486  -0.391  -2.308  H23  YTC  52  
YTC  H24  H24  H  0  1  N  N  N  -20.911  20.040  -26.456   8.479  -1.625  -1.468  H24  YTC  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YTC  C28  O29  SING  N  N   1  
YTC  C28  O27  SING  N  N   2  
YTC  O29  C23  SING  N  N   3  
YTC  O27  C24  SING  N  N   4  
YTC  C23  C24  DOUB  Y  N   5  
YTC  C23  C22  SING  Y  N   6  
YTC  C24  C25  SING  Y  N   7  
YTC  C22  C21  DOUB  Y  N   8  
YTC  C25  C26  DOUB  Y  N   9  
YTC  C12  O11  SING  N  N  10  
YTC  O11  C07  SING  N  N  11  
YTC  C21  C26  SING  Y  N  12  
YTC  C21  C20  SING  N  N  13  
YTC  C10  O09  SING  N  N  14  
YTC  C20  C15  SING  N  N  15  
YTC  C07  C06  DOUB  Y  N  16  
YTC  C07  C08  SING  Y  N  17  
YTC  O09  C08  SING  N  N  18  
YTC  C06  C05  SING  Y  N  19  
YTC  C08  C03  DOUB  Y  N  20  
YTC  C15  C14  SING  N  N  21  
YTC  C15  C16  SING  N  N  22  
YTC  C05  C13  SING  N  N  23  
YTC  C05  C04  DOUB  Y  N  24  
YTC  C03  C04  SING  Y  N  25  
YTC  C03  O02  SING  N  N  26  
YTC  C14  C13  SING  N  N  27  
YTC  C14  C18  SING  N  N  28  
YTC  C16  O17  SING  N  N  29  
YTC  O02  C01  SING  N  N  30  
YTC  C18  O17  SING  N  N  31  
YTC  C18  O19  DOUB  N  N  32  
YTC  C01  H1   SING  N  N  33  
YTC  C01  H2   SING  N  N  34  
YTC  C01  H3   SING  N  N  35  
YTC  C04  H4   SING  N  N  36  
YTC  C06  H5   SING  N  N  37  
YTC  C10  H6   SING  N  N  38  
YTC  C10  H7   SING  N  N  39  
YTC  C10  H8   SING  N  N  40  
YTC  C12  H9   SING  N  N  41  
YTC  C12  H10  SING  N  N  42  
YTC  C12  H11  SING  N  N  43  
YTC  C13  H12  SING  N  N  44  
YTC  C13  H13  SING  N  N  45  
YTC  C14  H14  SING  N  N  46  
YTC  C15  H15  SING  N  N  47  
YTC  C16  H16  SING  N  N  48  
YTC  C16  H17  SING  N  N  49  
YTC  C20  H18  SING  N  N  50  
YTC  C20  H19  SING  N  N  51  
YTC  C22  H20  SING  N  N  52  
YTC  C25  H21  SING  N  N  53  
YTC  C26  H22  SING  N  N  54  
YTC  C28  H23  SING  N  N  55  
YTC  C28  H24  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YTC  InChI             InChI                 1.03   "InChI=1S/C22H24O7/c1-24-19-9-14(10-20(25-2)21(19)26-3)7-16-15(11-27-22(16)23)6-13-4-5-17-18(8-13)29-12-28-17/h4-5,8-10,15-16H,6-7,11-12H2,1-3H3/t15-,16+/m1/s1"  
YTC  InChIKey          InChI                 1.03   GMLDZDDTZKXJLU-CVEARBPZSA-N  
YTC  SMILES_CANONICAL  CACTVS                3.385  "COc1cc(C[C@H]2[C@@H](COC2=O)Cc3ccc4OCOc4c3)cc(OC)c1OC"  
YTC  SMILES            CACTVS                3.385  "COc1cc(C[CH]2[CH](COC2=O)Cc3ccc4OCOc4c3)cc(OC)c1OC"  
YTC  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1cc(cc(c1OC)OC)C[C@H]2[C@@H](COC2=O)Cc3ccc4c(c3)OCO4"  
YTC  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1cc(cc(c1OC)OC)CC2C(COC2=O)Cc3ccc4c(c3)OCO4"  
#
_pdbx_chem_comp_identifier.comp_id          YTC
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(3~{S},4~{S})-4-(1,3-benzodioxol-5-ylmethyl)-3-[(3,4,5-trimethoxyphenyl)methyl]oxolan-2-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YTC  "Create component"  2021-03-18  PDBJ  
YTC  "Initial release"   2021-12-15  RCSB  
##
