data_YOC
# 
_chem_comp.id                                    YOC 
_chem_comp.name                                  "[2-fluoro-4-(trifluoromethyl)phenyl]methyl 2-[(5S)-4,5,6,7-tetrahydro-1H-benzotriazole-5-carbonyl]-2,7-diazaspiro[3.5]nonane-7-carboxylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H25 F4 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-19 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        495.470 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YOC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G4B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YOC C10 C1  C 0 1 N N N N N N -11.445 12.670 51.598 5.239  -1.149 -1.331 C10 YOC 1  
YOC C11 C2  C 0 1 N N S N N N -10.723 11.867 52.675 6.306  -0.999 -0.276 C11 YOC 2  
YOC O12 O1  O 0 1 N N N N N N -11.306 13.879 51.472 5.550  -1.227 -2.500 O12 YOC 3  
YOC C13 C3  C 0 1 N N N N N N -9.190  11.905 52.437 7.683  -0.973 -0.944 C13 YOC 4  
YOC C15 C4  C 0 1 N N N N N N -11.057 12.498 54.042 6.083  0.309  0.493  C15 YOC 5  
YOC C16 C5  C 0 1 Y N N N N N -10.374 11.632 55.014 7.288  0.560  1.361  C16 YOC 6  
YOC C17 C6  C 0 1 Y N N N N N -9.177  10.953 54.735 8.484  -0.058 1.199  C17 YOC 7  
YOC C21 C7  C 0 1 N N N N N N -14.686 7.246  47.375 -1.437 1.480  -1.093 C21 YOC 8  
YOC C23 C8  C 0 1 N N N N N N -13.390 6.581  45.393 -3.740 1.791  -0.550 C23 YOC 9  
YOC C25 C9  C 0 1 Y N N N N N -12.571 5.399  44.840 -4.947 0.979  -0.159 C25 YOC 10 
YOC C26 C10 C 0 1 Y N N N N N -11.735 5.651  43.720 -6.158 1.607  0.076  C26 YOC 11 
YOC C27 C11 C 0 1 Y N N N N N -10.999 4.633  43.092 -7.267 0.859  0.435  C27 YOC 12 
YOC C28 C12 C 0 1 Y N N N N N -11.096 3.327  43.580 -7.164 -0.513 0.559  C28 YOC 13 
YOC C1  C13 C 0 1 N N N N N N -12.670 10.535 50.636 2.655  -1.337 -1.675 C1  YOC 14 
YOC N2  N1  N 0 1 N N N N N N -12.313 11.977 50.719 3.941  -1.201 -0.973 N2  YOC 15 
YOC C3  C14 C 0 1 N N N N N N -13.160 12.424 49.586 3.188  -1.149 0.290  C3  YOC 16 
YOC C4  C15 C 0 1 N N N N N N -13.458 10.898 49.326 2.004  -0.596 -0.506 C4  YOC 17 
YOC C5  C16 C 0 1 N N N N N N -12.957 8.911  47.919 0.935  1.330  -1.671 C5  YOC 18 
YOC C6  C17 C 0 1 N N N N N N -12.802 10.418 48.044 2.006  0.922  -0.653 C6  YOC 19 
YOC C7  C18 C 0 1 N N N N N N -14.927 10.514 49.354 0.651  -1.163 -0.086 C7  YOC 20 
YOC C8  C19 C 0 1 N N N N N N -15.102 9.000  49.128 -0.410 -0.740 -1.108 C8  YOC 21 
YOC N9  N2  N 0 1 N N N N N N -14.380 8.530  47.918 -0.342 0.717  -1.284 N9  YOC 22 
YOC C14 C20 C 0 1 N N N N N N -8.402  11.048 53.467 8.776  -1.075 0.128  C14 YOC 23 
YOC N18 N3  N 0 1 Y N N N N N -8.918  10.224 55.900 9.293  0.424  2.158  N18 YOC 24 
YOC N19 N4  N 0 1 Y N N N N N -9.906  10.465 56.829 8.623  1.282  2.852  N19 YOC 25 
YOC N20 N5  N 0 1 Y N N N N N -10.778 11.297 56.326 7.420  1.383  2.396  N20 YOC 26 
YOC O22 O2  O 0 1 N N N N N N -13.600 6.519  46.828 -2.603 0.908  -0.739 O22 YOC 27 
YOC O24 O3  O 0 1 N N N N N N -15.814 6.758  47.393 -1.371 2.684  -1.242 O24 YOC 28 
YOC C29 C21 C 0 1 Y N N N N N -11.890 3.051  44.687 -5.954 -1.139 0.325  C29 YOC 29 
YOC C30 C22 C 0 1 Y N N N N N -12.616 4.081  45.309 -4.848 -0.395 -0.040 C30 YOC 30 
YOC F31 F1  F 0 1 N N N N N N -11.640 6.884  43.222 -6.258 2.949  -0.046 F31 YOC 31 
YOC C32 C23 C 0 1 N N N N N N -10.346 2.197  42.844 -8.370 -1.327 0.951  C32 YOC 32 
YOC F33 F2  F 0 1 N N N N N N -9.425  1.567  43.593 -9.062 -1.718 -0.199 F33 YOC 33 
YOC F34 F3  F 0 1 N N N N N N -11.114 1.204  42.390 -7.957 -2.463 1.656  F34 YOC 34 
YOC F35 F4  F 0 1 N N N N N N -9.702  2.585  41.738 -9.210 -0.555 1.762  F35 YOC 35 
YOC H48 H1  H 0 1 N N N N N N -11.070 10.823 52.657 6.253  -1.840 0.415  H48 YOC 36 
YOC H50 H2  H 0 1 N N N N N N -8.981  11.522 51.427 7.769  -1.815 -1.631 H50 YOC 37 
YOC H49 H3  H 0 1 N N N N N N -8.848  12.948 52.512 7.802  -0.041 -1.496 H49 YOC 38 
YOC H54 H4  H 0 1 N N N N N N -10.675 13.528 54.100 5.959  1.133  -0.210 H54 YOC 39 
YOC H53 H5  H 0 1 N N N N N N -12.143 12.500 54.216 5.193  0.222  1.117  H53 YOC 40 
YOC H56 H6  H 0 1 N N N N N N -14.372 6.586  44.897 -3.945 2.322  -1.480 H56 YOC 41 
YOC H57 H7  H 0 1 N N N N N N -12.856 7.514  45.159 -3.515 2.510  0.237  H57 YOC 42 
YOC H58 H8  H 0 1 N N N N N N -10.368 4.856  42.245 -8.212 1.349  0.619  H58 YOC 43 
YOC H37 H9  H 0 1 N N N N N N -11.817 9.856  50.489 2.612  -0.787 -2.615 H37 YOC 44 
YOC H36 H10 H 0 1 N N N N N N -13.294 10.166 51.463 2.321  -2.370 -1.775 H36 YOC 45 
YOC H38 H11 H 0 1 N N N N N N -14.037 13.023 49.873 2.999  -2.131 0.724  H38 YOC 46 
YOC H39 H12 H 0 1 N N N N N N -12.617 12.933 48.776 3.596  -0.440 1.010  H39 YOC 47 
YOC H41 H13 H 0 1 N N N N N N -12.494 8.578  46.979 0.832  2.415  -1.679 H41 YOC 48 
YOC H40 H14 H 0 1 N N N N N N -12.454 8.425  48.768 1.222  0.982  -2.663 H40 YOC 49 
YOC H43 H15 H 0 1 N N N N N N -13.281 10.907 47.183 1.787  1.382  0.311  H43 YOC 50 
YOC H42 H16 H 0 1 N N N N N N -11.733 10.675 48.063 2.985  1.253  -1.001 H42 YOC 51 
YOC H44 H17 H 0 1 N N N N N N -15.352 10.784 50.332 0.708  -2.251 -0.048 H44 YOC 52 
YOC H45 H18 H 0 1 N N N N N N -15.458 11.061 48.561 0.384  -0.776 0.898  H45 YOC 53 
YOC H46 H19 H 0 1 N N N N N N -14.712 8.463  50.005 -0.216 -1.232 -2.061 H46 YOC 54 
YOC H47 H20 H 0 1 N N N N N N -16.173 8.780  49.010 -1.399 -1.018 -0.745 H47 YOC 55 
YOC H52 H21 H 0 1 N N N N N N -8.243  10.039 53.059 8.773  -2.075 0.562  H52 YOC 56 
YOC H51 H22 H 0 1 N N N N N N -7.429  11.520 53.667 9.749  -0.869 -0.318 H51 YOC 57 
YOC H55 H23 H 0 1 N N N N N N -8.134  9.619  56.038 10.219 0.171  2.303  H55 YOC 58 
YOC H59 H24 H 0 1 N N N N N N -11.949 2.043  45.070 -5.873 -2.212 0.423  H59 YOC 59 
YOC H60 H25 H 0 1 N N N N N N -13.224 3.850  46.171 -3.904 -0.886 -0.227 H60 YOC 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YOC C1  N2  SING N N 1  
YOC C1  C4  SING N N 2  
YOC N2  C3  SING N N 3  
YOC N2  C10 SING N N 4  
YOC C3  C4  SING N N 5  
YOC C4  C6  SING N N 6  
YOC C4  C7  SING N N 7  
YOC C5  C6  SING N N 8  
YOC C5  N9  SING N N 9  
YOC C7  C8  SING N N 10 
YOC C8  N9  SING N N 11 
YOC N9  C21 SING N N 12 
YOC C10 C11 SING N N 13 
YOC C10 O12 DOUB N N 14 
YOC C11 C13 SING N N 15 
YOC C11 C15 SING N N 16 
YOC C13 C14 SING N N 17 
YOC C14 C17 SING N N 18 
YOC C15 C16 SING N N 19 
YOC C16 C17 DOUB Y N 20 
YOC C16 N20 SING Y N 21 
YOC C17 N18 SING Y N 22 
YOC N18 N19 SING Y N 23 
YOC N19 N20 DOUB Y N 24 
YOC C21 O22 SING N N 25 
YOC C21 O24 DOUB N N 26 
YOC O22 C23 SING N N 27 
YOC C23 C25 SING N N 28 
YOC C25 C26 DOUB Y N 29 
YOC C25 C30 SING Y N 30 
YOC C26 C27 SING Y N 31 
YOC C26 F31 SING N N 32 
YOC C27 C28 DOUB Y N 33 
YOC C28 C29 SING Y N 34 
YOC C28 C32 SING N N 35 
YOC C29 C30 DOUB Y N 36 
YOC C32 F33 SING N N 37 
YOC C32 F34 SING N N 38 
YOC C32 F35 SING N N 39 
YOC C11 H48 SING N N 40 
YOC C13 H50 SING N N 41 
YOC C13 H49 SING N N 42 
YOC C15 H54 SING N N 43 
YOC C15 H53 SING N N 44 
YOC C23 H56 SING N N 45 
YOC C23 H57 SING N N 46 
YOC C27 H58 SING N N 47 
YOC C1  H37 SING N N 48 
YOC C1  H36 SING N N 49 
YOC C3  H38 SING N N 50 
YOC C3  H39 SING N N 51 
YOC C5  H41 SING N N 52 
YOC C5  H40 SING N N 53 
YOC C6  H43 SING N N 54 
YOC C6  H42 SING N N 55 
YOC C7  H44 SING N N 56 
YOC C7  H45 SING N N 57 
YOC C8  H46 SING N N 58 
YOC C8  H47 SING N N 59 
YOC C14 H52 SING N N 60 
YOC C14 H51 SING N N 61 
YOC N18 H55 SING N N 62 
YOC C29 H59 SING N N 63 
YOC C30 H60 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YOC SMILES           ACDLabs              12.01 "FC(F)(F)c1ccc(COC(=O)N2CCC3(CC2)CN(C3)C(=O)C2CCc3[NH]nnc3C2)c(F)c1"                                                                                                           
YOC InChI            InChI                1.06  "InChI=1S/C23H25F4N5O3/c24-17-10-16(23(25,26)27)3-1-15(17)11-35-21(34)31-7-5-22(6-8-31)12-32(13-22)20(33)14-2-4-18-19(9-14)29-30-28-18/h1,3,10,14H,2,4-9,11-13H2,(H,28,29,30)" 
YOC InChIKey         InChI                1.06  ZVAPUQBYQNLXGP-UHFFFAOYSA-N                                                                                                                                                    
YOC SMILES_CANONICAL CACTVS               3.385 "Fc1cc(ccc1COC(=O)N2CCC3(CC2)CN(C3)C(=O)[C@H]4CCc5[nH]nnc5C4)C(F)(F)F"                                                                                                         
YOC SMILES           CACTVS               3.385 "Fc1cc(ccc1COC(=O)N2CCC3(CC2)CN(C3)C(=O)[CH]4CCc5[nH]nnc5C4)C(F)(F)F"                                                                                                          
YOC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C(F)(F)F)F)COC(=O)N2CCC3(CC2)CN(C3)C(=O)[C@H]4CCc5c(nn[nH]5)C4"                                                                                                     
YOC SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C(F)(F)F)F)COC(=O)N2CCC3(CC2)CN(C3)C(=O)C4CCc5c(nn[nH]5)C4"                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YOC "SYSTEMATIC NAME" ACDLabs              12.01 "[2-fluoro-4-(trifluoromethyl)phenyl]methyl 2-[(5S)-4,5,6,7-tetrahydro-1H-benzotriazole-5-carbonyl]-2,7-diazaspiro[3.5]nonane-7-carboxylate"             
YOC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[2-fluoranyl-4-(trifluoromethyl)phenyl]methyl 2-[[(5~{S})-4,5,6,7-tetrahydro-1~{H}-benzotriazol-5-yl]carbonyl]-2,7-diazaspiro[3.5]nonane-7-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YOC "Create component" 2023-06-19 RCSB 
YOC "Initial release"  2024-12-18 RCSB 
# 
