data_YHC
# 
_chem_comp.id                                    YHC 
_chem_comp.name                                  "~{N}-[2-chloranyl-4-(trifluoromethyl)phenyl]-2-[2-(3,6-dihydro-2~{H}-pyran-4-yl)-5-ethyl-6-[4-(6-methyl-5-oxidanyl-pyrimidin-4-yl)carbonylpiperazin-1-yl]-7-oxidanylidene-[1,2,4]triazolo[1,5-a]pyrimidin-4-yl]ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H31 Cl F3 N9 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-16 
_chem_comp.pdbx_modified_date                    2024-04-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        702.083 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YHC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PFO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YHC C1   C1  C  0 1 N N N N N N -6.380  0.911  25.111 -0.994  0.063  -3.718 C1   YHC 1  
YHC C2   C2  C  0 1 N N N N N N -6.148  0.029  23.872 -0.654  -0.317 -2.276 C2   YHC 2  
YHC C3   C3  C  0 1 N N N N N N -6.647  -1.378 24.084 -0.414  0.934  -1.470 C3   YHC 3  
YHC C42  C4  C  0 1 Y N N N N N 0.450   -2.093 25.762 -6.867  -1.180 0.640  C42  YHC 4  
YHC C44  C5  C  0 1 Y N N N N N 1.970   -1.245 24.312 -6.294  -2.815 2.155  C44  YHC 5  
YHC C46  C6  C  0 1 Y N N N N N 2.297   -3.384 24.969 -8.361  -2.981 1.163  C46  YHC 6  
YHC C47  C7  C  0 1 N N N N N N 3.084   -4.658 24.891 -9.673  -3.705 0.995  C47  YHC 7  
YHC C48  C8  C  0 1 Y N N N N N 1.146   -3.289 25.766 -8.102  -1.813 0.446  C48  YHC 8  
YHC C11  C9  C  0 1 Y N N N N N -8.304  -3.081 23.808 1.071   2.604  -0.653 C11  YHC 9  
YHC C13  C10 C  0 1 N N N N N N -8.917  -0.800 23.120 1.959   0.808  -2.078 C13  YHC 10 
YHC C14  C11 C  0 1 N N N N N N -9.839  -0.427 24.267 2.600   -0.202 -1.162 C14  YHC 11 
YHC C17  C12 C  0 1 Y N N N N N -11.765 1.025  24.820 4.185   -1.936 -0.778 C17  YHC 12 
YHC C18  C13 C  0 1 Y N N N N N -13.106 1.001  24.436 4.206   -1.779 0.601  C18  YHC 13 
YHC C19  C14 C  0 1 Y N N N N N -14.086 1.441  25.307 4.728   -2.777 1.401  C19  YHC 14 
YHC C20  C15 C  0 1 Y N N N N N -13.757 1.920  26.570 5.227   -3.933 0.830  C20  YHC 15 
YHC C21  C16 C  0 1 Y N N N N N -12.426 1.950  26.969 5.208   -4.094 -0.544 C21  YHC 16 
YHC C22  C17 C  0 1 Y N N N N N -11.450 1.511  26.096 4.688   -3.099 -1.350 C22  YHC 17 
YHC C24  C18 C  0 1 N N N N N N -14.818 2.445  27.484 5.795   -5.020 1.706  C24  YHC 18 
YHC C28  C19 C  0 1 N N N N N N -10.344 -5.922 23.766 2.834   5.366  0.834  C28  YHC 19 
YHC C29  C20 C  0 1 N N N N N N -10.196 -7.247 24.485 2.342   6.485  1.709  C29  YHC 20 
YHC C30  C21 C  0 1 N N N N N N -11.463 -8.124 24.303 3.531   7.153  2.406  C30  YHC 21 
YHC C4   C22 C  0 1 N N N N N N -5.841  -2.318 24.697 -1.444  1.536  -0.828 C4   YHC 22 
YHC C5   C23 C  0 1 N N N N N N -6.229  -3.699 24.894 -1.205  2.710  -0.074 C5   YHC 23 
YHC O6   O1  O  0 1 N N N N N N -5.541  -4.583 25.399 -2.122  3.260  0.509  O6   YHC 24 
YHC N7   N1  N  0 1 Y N N N N N -7.501  -3.978 24.411 0.040   3.214  -0.004 N7   YHC 25 
YHC N8   N2  N  0 1 Y N N N N N -8.126  -5.195 24.501 0.581   4.336  0.640  N8   YHC 26 
YHC C9   C24 C  0 1 Y N N N N N -9.294  -4.923 23.915 1.868   4.352  0.361  C9   YHC 27 
YHC N10  N3  N  0 1 Y N N N N N -9.445  -3.628 23.467 2.161   3.304  -0.421 N10  YHC 28 
YHC N12  N4  N  0 1 N N N N N N -7.933  -1.760 23.631 0.846   1.460  -1.383 N12  YHC 29 
YHC O15  O2  O  0 1 N N N N N N -9.695  -0.938 25.376 2.170   -0.362 -0.039 O15  YHC 30 
YHC N16  N5  N  0 1 N N N N N N -10.745 0.531  23.975 3.652   -0.928 -1.591 N16  YHC 31 
YHC CL23 CL1 CL 0 0 N N N N N N -9.792  1.618  26.596 4.663   -3.301 -3.074 CL23 YHC 32 
YHC F25  F1  F  0 1 N N N N N N -15.999 1.905  27.245 6.338   -4.450 2.862  F25  YHC 33 
YHC F26  F2  F  0 1 N N N N N N -14.552 2.208  28.783 4.778   -5.913 2.059  F26  YHC 34 
YHC F27  F3  F  0 1 N N N N N N -14.989 3.769  27.361 6.796   -5.705 1.009  F27  YHC 35 
YHC O31  O3  O  0 1 N N N N N N -12.016 -7.986 22.983 4.540   7.419  1.424  O31  YHC 36 
YHC C32  C25 C  0 1 N N N N N N -12.473 -6.661 22.723 5.151   6.233  0.913  C32  YHC 37 
YHC C33  C26 C  0 1 N N N N N N -11.425 -5.641 23.006 4.095   5.260  0.470  C33  YHC 38 
YHC N34  N6  N  0 1 N N N N N N -4.571  -2.161 25.140 -2.742  0.997  -0.909 N34  YHC 39 
YHC C35  C27 C  0 1 N N N N N N -4.280  -2.013 26.581 -3.043  -0.319 -0.329 C35  YHC 40 
YHC C36  C28 C  0 1 N N N N N N -3.086  -1.090 26.798 -4.212  -0.166 0.652  C36  YHC 41 
YHC N37  N7  N  0 1 N N N N N N -1.945  -1.540 25.996 -5.290  0.579  -0.014 N37  YHC 42 
YHC C38  C29 C  0 1 N N N N N N -2.245  -1.532 24.559 -4.988  1.895  -0.594 C38  YHC 43 
YHC C39  C30 C  0 1 N N N N N N -3.422  -2.470 24.265 -3.821  1.744  -1.570 C39  YHC 44 
YHC C40  C31 C  0 1 N N N N N N -0.797  -1.934 26.594 -6.533  0.063  -0.092 C40  YHC 45 
YHC O41  O4  O  0 1 N N N N N N -0.728  -2.158 27.797 -7.380  0.619  -0.763 O41  YHC 46 
YHC N43  N8  N  0 1 Y N N N N N 0.862   -1.041 25.031 -6.000  -1.714 1.499  N43  YHC 47 
YHC N45  N9  N  0 1 Y N N N N N 2.719   -2.350 24.236 -7.447  -3.438 1.998  N45  YHC 48 
YHC O49  O5  O  0 1 N N N N N N 0.765   -4.331 26.549 -9.019  -1.303 -0.414 O49  YHC 49 
YHC H1   H1  H  0 1 N N N N N N -6.003  1.926  24.915 -1.892  0.680  -3.729 H1   YHC 50 
YHC H2   H2  H  0 1 N N N N N N -7.457  0.956  25.332 -0.164  0.620  -4.153 H2   YHC 51 
YHC H3   H3  H  0 1 N N N N N N -5.846  0.482  25.972 -1.168  -0.842 -4.301 H3   YHC 52 
YHC H4   H4  H  0 1 N N N N N N -5.070  -0.004 23.656 -1.484  -0.875 -1.842 H4   YHC 53 
YHC H5   H5  H  0 1 N N N N N N -6.680  0.470  23.016 0.244   -0.935 -2.265 H5   YHC 54 
YHC H6   H6  H  0 1 N N N N N N 2.304   -0.409 23.715 -5.569  -3.222 2.845  H6   YHC 55 
YHC H7   H7  H  0 1 N N N N N N 3.931   -4.525 24.202 -9.584  -4.437 0.193  H7   YHC 56 
YHC H8   H8  H  0 1 N N N N N N 3.462   -4.917 25.891 -9.928  -4.214 1.925  H8   YHC 57 
YHC H9   H9  H  0 1 N N N N N N 2.436   -5.467 24.523 -10.455 -2.987 0.747  H9   YHC 58 
YHC H10  H10 H  0 1 N N N N N N -8.404  0.098  22.745 2.697   1.557  -2.365 H10  YHC 59 
YHC H11  H11 H  0 1 N N N N N N -9.498  -1.257 22.306 1.586   0.305  -2.970 H11  YHC 60 
YHC H12  H12 H  0 1 N N N N N N -13.379 0.638  23.456 3.816   -0.876 1.048  H12  YHC 61 
YHC H13  H13 H  0 1 N N N N N N -15.122 1.412  25.002 4.745   -2.655 2.474  H13  YHC 62 
YHC H14  H14 H  0 1 N N N N N N -12.158 2.312  27.950 5.600   -4.997 -0.987 H14  YHC 63 
YHC H15  H15 H  0 1 N N N N N N -9.326  -7.783 24.077 1.819   7.221  1.098  H15  YHC 64 
YHC H16  H16 H  0 1 N N N N N N -10.040 -7.059 25.557 1.659   6.086  2.460  H16  YHC 65 
YHC H17  H17 H  0 1 N N N N N N -12.219 -7.817 25.041 3.209   8.089  2.863  H17  YHC 66 
YHC H18  H18 H  0 1 N N N N N N -11.195 -9.178 24.470 3.927   6.488  3.173  H18  YHC 67 
YHC H19  H19 H  0 1 N N N N N N -10.688 0.935  23.062 4.040   -0.753 -2.462 H19  YHC 68 
YHC H20  H20 H  0 1 N N N N N N -12.763 -6.587 21.665 5.782   6.489  0.062  H20  YHC 69 
YHC H21  H21 H  0 1 N N N N N N -13.348 -6.456 23.358 5.764   5.778  1.691  H21  YHC 70 
YHC H22  H22 H  0 1 N N N N N N -11.532 -4.649 22.592 4.384   4.435  -0.165 H22  YHC 71 
YHC H23  H23 H  0 1 N N N N N N -5.161  -1.589 27.085 -3.320  -1.013 -1.123 H23  YHC 72 
YHC H24  H24 H  0 1 N N N N N N -4.054  -3.002 27.007 -2.168  -0.695 0.200  H24  YHC 73 
YHC H25  H25 H  0 1 N N N N N N -2.808  -1.100 27.862 -4.575  -1.151 0.945  H25  YHC 74 
YHC H26  H26 H  0 1 N N N N N N -3.359  -0.067 26.500 -3.879  0.379  1.535  H26  YHC 75 
YHC H27  H27 H  0 1 N N N N N N -1.360  -1.871 24.000 -5.864  2.271  -1.124 H27  YHC 76 
YHC H28  H28 H  0 1 N N N N N N -2.507  -0.510 24.247 -4.714  2.590  0.200  H28  YHC 77 
YHC H29  H29 H  0 1 N N N N N N -3.726  -2.349 23.215 -3.459  2.730  -1.863 H29  YHC 78 
YHC H30  H30 H  0 1 N N N N N N -3.106  -3.509 24.438 -4.150  1.196  -2.453 H30  YHC 79 
YHC H31  H31 H  0 1 N N N N N N 0.164   -4.023 27.217 -8.937  -1.635 -1.318 H31  YHC 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YHC C32 O31  SING N N 1  
YHC C32 C33  SING N N 2  
YHC O31 C30  SING N N 3  
YHC C33 C28  DOUB N N 4  
YHC C13 N12  SING N N 5  
YHC C13 C14  SING N N 6  
YHC N10 C11  DOUB Y N 7  
YHC N10 C9   SING Y N 8  
YHC N12 C11  SING N N 9  
YHC N12 C3   SING N N 10 
YHC C28 C9   SING N N 11 
YHC C28 C29  SING N N 12 
YHC C11 N7   SING Y N 13 
YHC C2  C3   SING N N 14 
YHC C2  C1   SING N N 15 
YHC C9  N8   DOUB Y N 16 
YHC N16 C14  SING N N 17 
YHC N16 C17  SING N N 18 
YHC C3  C4   DOUB N N 19 
YHC N45 C44  DOUB Y N 20 
YHC N45 C46  SING Y N 21 
YHC C39 C38  SING N N 22 
YHC C39 N34  SING N N 23 
YHC C14 O15  DOUB N N 24 
YHC C30 C29  SING N N 25 
YHC C44 N43  SING Y N 26 
YHC N7  N8   SING Y N 27 
YHC N7  C5   SING N N 28 
YHC C18 C17  DOUB Y N 29 
YHC C18 C19  SING Y N 30 
YHC C38 N37  SING N N 31 
YHC C4  C5   SING N N 32 
YHC C4  N34  SING N N 33 
YHC C17 C22  SING Y N 34 
YHC C47 C46  SING N N 35 
YHC C5  O6   DOUB N N 36 
YHC C46 C48  DOUB Y N 37 
YHC N43 C42  DOUB Y N 38 
YHC N34 C35  SING N N 39 
YHC C19 C20  DOUB Y N 40 
YHC C42 C48  SING Y N 41 
YHC C42 C40  SING N N 42 
YHC C48 O49  SING N N 43 
YHC N37 C40  SING N N 44 
YHC N37 C36  SING N N 45 
YHC C22 CL23 SING N N 46 
YHC C22 C21  DOUB Y N 47 
YHC C20 C21  SING Y N 48 
YHC C20 C24  SING N N 49 
YHC C35 C36  SING N N 50 
YHC C40 O41  DOUB N N 51 
YHC F25 C24  SING N N 52 
YHC F27 C24  SING N N 53 
YHC C24 F26  SING N N 54 
YHC C1  H1   SING N N 55 
YHC C1  H2   SING N N 56 
YHC C1  H3   SING N N 57 
YHC C2  H4   SING N N 58 
YHC C2  H5   SING N N 59 
YHC C44 H6   SING N N 60 
YHC C47 H7   SING N N 61 
YHC C47 H8   SING N N 62 
YHC C47 H9   SING N N 63 
YHC C13 H10  SING N N 64 
YHC C13 H11  SING N N 65 
YHC C18 H12  SING N N 66 
YHC C19 H13  SING N N 67 
YHC C21 H14  SING N N 68 
YHC C29 H15  SING N N 69 
YHC C29 H16  SING N N 70 
YHC C30 H17  SING N N 71 
YHC C30 H18  SING N N 72 
YHC N16 H19  SING N N 73 
YHC C32 H20  SING N N 74 
YHC C32 H21  SING N N 75 
YHC C33 H22  SING N N 76 
YHC C35 H23  SING N N 77 
YHC C35 H24  SING N N 78 
YHC C36 H25  SING N N 79 
YHC C36 H26  SING N N 80 
YHC C38 H27  SING N N 81 
YHC C38 H28  SING N N 82 
YHC C39 H29  SING N N 83 
YHC C39 H30  SING N N 84 
YHC O49 H31  SING N N 85 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YHC InChI            InChI                1.06  "InChI=1S/C31H31ClF3N9O5/c1-3-22-25(41-8-10-42(11-9-41)28(47)24-26(46)17(2)36-16-37-24)29(48)44-30(39-27(40-44)18-6-12-49-13-7-18)43(22)15-23(45)38-21-5-4-19(14-20(21)32)31(33,34)35/h4-6,14,16,46H,3,7-13,15H2,1-2H3,(H,38,45)" 
YHC InChIKey         InChI                1.06  XKYVECRUZPCRQR-UHFFFAOYSA-N                                                                                                                                                                                                       
YHC SMILES_CANONICAL CACTVS               3.385 "CCC1=C(N2CCN(CC2)C(=O)c3ncnc(C)c3O)C(=O)n4nc(nc4N1CC(=O)Nc5ccc(cc5Cl)C(F)(F)F)C6=CCOCC6"                                                                                                                                         
YHC SMILES           CACTVS               3.385 "CCC1=C(N2CCN(CC2)C(=O)c3ncnc(C)c3O)C(=O)n4nc(nc4N1CC(=O)Nc5ccc(cc5Cl)C(F)(F)F)C6=CCOCC6"                                                                                                                                         
YHC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)n2c(nc(n2)C3=CCOCC3)N1CC(=O)Nc4ccc(cc4Cl)C(F)(F)F)N5CCN(CC5)C(=O)c6c(c(ncn6)C)O"                                                                                                                                     
YHC SMILES           "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)n2c(nc(n2)C3=CCOCC3)N1CC(=O)Nc4ccc(cc4Cl)C(F)(F)F)N5CCN(CC5)C(=O)c6c(c(ncn6)C)O"                                                                                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           YHC 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[2-chloranyl-4-(trifluoromethyl)phenyl]-2-[2-(3,6-dihydro-2~{H}-pyran-4-yl)-5-ethyl-6-[4-(6-methyl-5-oxidanyl-pyrimidin-4-yl)carbonylpiperazin-1-yl]-7-oxidanylidene-[1,2,4]triazolo[1,5-a]pyrimidin-4-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YHC "Create component" 2023-06-16 PDBE 
YHC "Initial release"  2024-04-24 RCSB 
# 
