data_Y2C
# 
_chem_comp.id                                    Y2C 
_chem_comp.name                                  3,5-dichloropyridin-4-amine 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H4 Cl2 N2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-14 
_chem_comp.pdbx_modified_date                    2024-02-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        163.005 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y2C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GRG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y2C C02  C1  C  0 1 Y N N N N N -18.324 -6.379 -25.491 -0.000 -0.488 -0.001 C02  Y2C 1  
Y2C C03  C2  C  0 1 Y N N N N N -16.956 -6.548 -25.365 -1.197 0.227  -0.000 C03  Y2C 2  
Y2C C05  C3  C  0 1 Y N N N N N -16.155 -5.431 -25.274 -1.154 1.607  0.001  C05  Y2C 3  
Y2C C07  C4  C  0 1 Y N N N N N -17.968 -4.039 -25.438 1.154  1.607  0.001  C07  Y2C 4  
Y2C C08  C5  C  0 1 Y N N N N N -18.850 -5.102 -25.532 1.197  0.227  -0.001 C08  Y2C 5  
Y2C N01  N1  N  0 1 N N N N N N -19.198 -7.534 -25.585 0.000  -1.882 0.004  N01  Y2C 6  
Y2C N06  N2  N  0 1 Y N N N N N -16.661 -4.226 -25.320 -0.000 2.247  0.001  N06  Y2C 7  
Y2C CL04 CL1 CL 0 0 N N N N N N -16.235 -8.172 -25.307 -2.721 -0.605 -0.001 CL04 Y2C 8  
Y2C CL09 CL2 CL 0 0 N N N N N N -20.618 -4.864 -25.695 2.721  -0.605 -0.001 CL09 Y2C 9  
Y2C H1   H1  H  0 1 N N N N N N -15.088 -5.553 -25.162 -2.076 2.169  0.002  H1   Y2C 10 
Y2C H2   H2  H  0 1 N N N N N N -18.355 -3.031 -25.461 2.076  2.169  0.001  H2   Y2C 11 
Y2C H3   H3  H  0 1 N N N N N N -18.652 -8.370 -25.539 -0.840 -2.367 0.007  H3   Y2C 12 
Y2C H4   H4  H  0 1 N N N N N N -19.851 -7.520 -24.828 0.840  -2.367 0.003  H4   Y2C 13 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y2C CL09 C08  SING N N 1  
Y2C N01  C02  SING N N 2  
Y2C C08  C02  DOUB Y N 3  
Y2C C08  C07  SING Y N 4  
Y2C C02  C03  SING Y N 5  
Y2C C07  N06  DOUB Y N 6  
Y2C C03  CL04 SING N N 7  
Y2C C03  C05  DOUB Y N 8  
Y2C N06  C05  SING Y N 9  
Y2C C05  H1   SING N N 10 
Y2C C07  H2   SING N N 11 
Y2C N01  H3   SING N N 12 
Y2C N01  H4   SING N N 13 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y2C SMILES           ACDLabs              12.01 "Clc1cncc(Cl)c1N"                                        
Y2C InChI            InChI                1.06  "InChI=1S/C5H4Cl2N2/c6-3-1-9-2-4(7)5(3)8/h1-2H,(H2,8,9)" 
Y2C InChIKey         InChI                1.06  ISIQAMHROGZHOV-UHFFFAOYSA-N                              
Y2C SMILES_CANONICAL CACTVS               3.385 "Nc1c(Cl)cncc1Cl"                                        
Y2C SMILES           CACTVS               3.385 "Nc1c(Cl)cncc1Cl"                                        
Y2C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(c(c(cn1)Cl)N)Cl"                                    
Y2C SMILES           "OpenEye OEToolkits" 2.0.7 "c1c(c(c(cn1)Cl)N)Cl"                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y2C "SYSTEMATIC NAME" ACDLabs              12.01 3,5-dichloropyridin-4-amine         
Y2C "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3,5-bis(chloranyl)pyridin-4-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y2C "Create component" 2023-11-14 RCSB 
Y2C "Initial release"  2024-02-14 RCSB 
# 
