data_UBC
# 
_chem_comp.id                                    UBC 
_chem_comp.name                                  "(S)-1-(2-AMINO-2-CARBOXYETHYL)-3-(2-CARBOXYBENZYL)PYRIMIDINE-2,4-DIONE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H15 N3 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2005-12-07 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        333.296 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UBC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2F35 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UBC O1   O1   O 0 1 N N N -1.269  -6.656 14.342 -5.324 -1.840 1.208  O1   UBC 1  
UBC C10  C10  C 0 1 N N N -1.611  -7.318 15.352 -4.147 -1.189 1.123  C10  UBC 2  
UBC O2   O2   O 0 1 N N N -1.741  -8.566 15.340 -3.429 -1.104 2.099  O2   UBC 3  
UBC C22  C22  C 0 1 Y N N -1.885  -6.591 16.635 -3.730 -0.580 -0.156 C22  UBC 4  
UBC C23  C23  C 0 1 Y N N -1.468  -7.112 17.860 -4.604 -0.569 -1.246 C23  UBC 5  
UBC C24  C24  C 0 1 Y N N -1.750  -6.409 19.039 -4.208 0.001  -2.437 C24  UBC 6  
UBC C25  C25  C 0 1 Y N N -2.436  -5.197 19.022 -2.950 0.567  -2.553 C25  UBC 7  
UBC C26  C26  C 0 1 Y N N -2.864  -4.642 17.826 -2.082 0.565  -1.477 C26  UBC 8  
UBC C21  C21  C 0 1 Y N N -2.619  -5.303 16.637 -2.465 -0.002 -0.278 C21  UBC 9  
UBC C17  C17  C 0 1 N N N -3.081  -4.713 15.331 -1.518 -0.003 0.894  C17  UBC 10 
UBC N6   N6   N 0 1 Y N N -4.301  -3.902 15.466 -0.290 0.708  0.530  N6   UBC 11 
UBC C5   C5   C 0 1 Y N N -5.589  -4.439 15.596 0.764  0.023  0.050  C5   UBC 12 
UBC O8   O8   O 0 1 N N N -5.767  -5.679 15.644 0.689  -1.184 -0.073 O8   UBC 13 
UBC C1   C1   C 0 1 Y N N -4.141  -2.515 15.414 -0.222 2.047  0.672  C1   UBC 14 
UBC O7   O7   O 0 1 N N N -2.990  -2.090 15.280 -1.178 2.669  1.102  O7   UBC 15 
UBC C2   C2   C 0 1 Y N N -5.230  -1.663 15.506 0.969  2.724  0.318  C2   UBC 16 
UBC C3   C3   C 0 1 Y N N -6.503  -2.214 15.641 2.014  2.012  -0.156 C3   UBC 17 
UBC N4   N4   N 0 1 Y N N -6.687  -3.543 15.698 1.904  0.654  -0.286 N4   UBC 18 
UBC CB   CB   C 0 1 N N N -8.050  -4.079 15.810 3.037  -0.119 -0.801 CB   UBC 19 
UBC CA   CA   C 0 1 N N S -8.482  -4.488 14.386 3.928  -0.557 0.364  CA   UBC 20 
UBC N    N    N 0 1 N N N -8.256  -3.423 13.408 4.329  0.622  1.143  N    UBC 21 
UBC C    C    C 0 1 N N N -9.937  -4.863 14.407 5.156  -1.245 -0.173 C    UBC 22 
UBC O    O    O 0 1 N N N -10.721 -4.207 13.691 5.090  -2.529 -0.561 O    UBC 23 
UBC OXT  OXT  O 0 1 N N N -10.328 -5.808 15.136 6.199  -0.642 -0.255 OXT  UBC 24 
UBC HO1  HO1  H 0 1 N N N -1.135  -7.244 13.608 -5.596 -2.239 2.045  HO1  UBC 25 
UBC H23  H23  H 0 1 N N N -0.932  -8.049 17.899 -5.586 -1.011 -1.156 H23  UBC 26 
UBC H24  H24  H 0 1 N N N -1.427  -6.818 19.985 -4.881 0.006  -3.282 H24  UBC 27 
UBC H25  H25  H 0 1 N N N -2.637  -4.684 19.951 -2.646 1.013  -3.489 H25  UBC 28 
UBC H26  H26  H 0 1 N N N -3.387  -3.697 17.823 -1.102 1.008  -1.574 H26  UBC 29 
UBC H171 1H17 H 0 0 N N N -3.312  -5.548 14.654 -1.276 -1.031 1.164  H171 UBC 30 
UBC H172 2H17 H 0 0 N N N -2.279  -4.069 14.940 -1.989 0.495  1.742  H172 UBC 31 
UBC H2   H2   H 0 1 N N N -5.095  -0.592 15.474 1.042  3.796  0.425  H2   UBC 32 
UBC H3   H3   H 0 1 N N N -7.359  -1.559 15.701 2.931  2.511  -0.432 H3   UBC 33 
UBC HB1  1HB  H 0 1 N N N -8.736  -3.329 16.231 3.616  0.497  -1.488 HB1  UBC 34 
UBC HB2  2HB  H 0 1 N N N -8.066  -4.950 16.481 2.667  -1.000 -1.326 HB2  UBC 35 
UBC HA   HA   H 0 1 N N N -7.866  -5.345 14.076 3.376  -1.245 1.005  HA   UBC 36 
UBC HN1  1HN  H 0 1 N N N -7.398  -3.592 12.923 4.833  1.228  0.513  HN1  UBC 37 
UBC HN2  2HN  H 0 1 N N N -8.204  -2.542 13.879 3.480  1.107  1.394  HN2  UBC 38 
UBC HO   HO   H 0 1 N N N -11.604 -4.540 13.800 5.878  -2.971 -0.905 HO   UBC 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UBC O1  C10  SING N N 1  
UBC O1  HO1  SING N N 2  
UBC C10 O2   DOUB N N 3  
UBC C10 C22  SING N N 4  
UBC C22 C23  DOUB Y N 5  
UBC C22 C21  SING Y N 6  
UBC C23 C24  SING Y N 7  
UBC C23 H23  SING N N 8  
UBC C24 C25  DOUB Y N 9  
UBC C24 H24  SING N N 10 
UBC C25 C26  SING Y N 11 
UBC C25 H25  SING N N 12 
UBC C26 C21  DOUB Y N 13 
UBC C26 H26  SING N N 14 
UBC C21 C17  SING N N 15 
UBC C17 N6   SING N N 16 
UBC C17 H171 SING N N 17 
UBC C17 H172 SING N N 18 
UBC N6  C5   SING Y N 19 
UBC N6  C1   SING Y N 20 
UBC C5  O8   DOUB N N 21 
UBC C5  N4   SING Y N 22 
UBC C1  O7   DOUB N N 23 
UBC C1  C2   SING Y N 24 
UBC C2  C3   DOUB Y N 25 
UBC C2  H2   SING N N 26 
UBC C3  N4   SING Y N 27 
UBC C3  H3   SING N N 28 
UBC N4  CB   SING N N 29 
UBC CB  CA   SING N N 30 
UBC CB  HB1  SING N N 31 
UBC CB  HB2  SING N N 32 
UBC CA  N    SING N N 33 
UBC CA  C    SING N N 34 
UBC CA  HA   SING N N 35 
UBC N   HN1  SING N N 36 
UBC N   HN2  SING N N 37 
UBC C   O    SING N N 38 
UBC C   OXT  DOUB N N 39 
UBC O   HO   SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UBC SMILES           ACDLabs              10.04 "O=C(O)c1ccccc1CN2C(=O)C=CN(C2=O)CC(N)C(=O)O"                                                                                              
UBC SMILES_CANONICAL CACTVS               3.341 "N[C@@H](CN1C=CC(=O)N(Cc2ccccc2C(O)=O)C1=O)C(O)=O"                                                                                         
UBC SMILES           CACTVS               3.341 "N[CH](CN1C=CC(=O)N(Cc2ccccc2C(O)=O)C1=O)C(O)=O"                                                                                           
UBC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(c(c1)CN2C(=O)C=CN(C2=O)C[C@@H](C(=O)O)N)C(=O)O"                                                                                     
UBC SMILES           "OpenEye OEToolkits" 1.5.0 "c1ccc(c(c1)CN2C(=O)C=CN(C2=O)CC(C(=O)O)N)C(=O)O"                                                                                          
UBC InChI            InChI                1.03  "InChI=1S/C15H15N3O6/c16-11(14(22)23)8-17-6-5-12(19)18(15(17)24)7-9-3-1-2-4-10(9)13(20)21/h1-6,11H,7-8,16H2,(H,20,21)(H,22,23)/t11-/m0/s1" 
UBC InChIKey         InChI                1.03  UUIYULWYHDSXHL-NSHDSACASA-N                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UBC "SYSTEMATIC NAME" ACDLabs              10.04 "2-({3-[(2S)-2-amino-2-carboxyethyl]-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)benzoic acid" 
UBC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[3-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-2,6-dioxo-pyrimidin-1-yl]methyl]benzoic acid"        
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UBC "Create component"  2005-12-07 RCSB 
UBC "Modify descriptor" 2011-06-04 RCSB 
# 
