data_U5C
# 
_chem_comp.id                                    U5C 
_chem_comp.name                                  "2,2-bis(oxidanyl)pentanedioic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H8 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "2,2-dihydroxyglutarate; 2,2-dihydroxypentanedioic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-03 
_chem_comp.pdbx_modified_date                    2023-08-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        164.113 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     U5C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OWM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
U5C C07 C1 C 0 1 N N N 9.638  34.023 74.434 0.241  0.321  -0.104 C07 U5C 1  
U5C C08 C2 C 0 1 N N N 8.457  33.081 74.228 -1.044 -0.479 0.120  C08 U5C 2  
U5C C09 C3 C 0 1 N N N 10.482 33.918 73.213 1.452  -0.583 0.137  C09 U5C 3  
U5C C10 C4 C 0 1 N N N 7.286  33.721 74.947 -2.237 0.411  -0.117 C10 U5C 4  
U5C C11 C5 C 0 1 N N N 11.654 34.857 73.315 2.718  0.205  -0.083 C11 U5C 5  
U5C O01 O1 O 0 1 N N N 8.794  31.802 74.724 -1.084 -1.581 -0.789 O01 U5C 6  
U5C O02 O2 O 0 1 N N N 8.033  32.965 72.884 -1.073 -0.967 1.463  O02 U5C 7  
U5C O03 O3 O 0 1 N N N 7.414  34.859 75.467 -2.356 1.567  0.555  O03 U5C 8  
U5C O04 O4 O 0 1 N N N 6.209  33.107 74.903 -3.085 0.085  -0.913 O04 U5C 9  
U5C O05 O5 O 0 1 N N N 12.463 34.744 74.266 3.913  -0.388 0.073  O05 U5C 10 
U5C O06 O6 O 0 1 N N N 11.849 35.614 72.361 2.658  1.369  -0.401 O06 U5C 11 
U5C H1  H1 H 0 1 N N N 10.214 33.721 75.321 0.264  0.693  -1.128 H1  U5C 12 
U5C H2  H2 H 0 1 N N N 9.282  35.056 74.562 0.272  1.161  0.589  H2  U5C 13 
U5C H3  H3 H 0 1 N N N 9.880  34.181 72.331 1.430  -0.955 1.161  H3  U5C 14 
U5C H4  H4 H 0 1 N N N 10.850 32.886 73.112 1.422  -1.424 -0.556 H4  U5C 15 
U5C H5  H5 H 0 1 N N N 8.033  31.412 75.139 -1.066 -1.323 -1.721 H5  U5C 16 
U5C H6  H6 H 0 1 N N N 7.084  32.950 72.851 -1.049 -0.272 2.134  H6  U5C 17 
U5C H7  H7 H 0 1 N N N 6.575  35.150 75.804 -3.138 2.104  0.369  H7  U5C 18 
U5C H8  H8 H 0 1 N N N 13.207 35.317 74.119 4.696  0.158  -0.080 H8  U5C 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
U5C O06 C11 DOUB N N 1  
U5C O02 C08 SING N N 2  
U5C C09 C11 SING N N 3  
U5C C09 C07 SING N N 4  
U5C C11 O05 SING N N 5  
U5C C08 C07 SING N N 6  
U5C C08 O01 SING N N 7  
U5C C08 C10 SING N N 8  
U5C O04 C10 DOUB N N 9  
U5C C10 O03 SING N N 10 
U5C C07 H1  SING N N 11 
U5C C07 H2  SING N N 12 
U5C C09 H3  SING N N 13 
U5C C09 H4  SING N N 14 
U5C O01 H5  SING N N 15 
U5C O02 H6  SING N N 16 
U5C O03 H7  SING N N 17 
U5C O05 H8  SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
U5C InChI            InChI                1.06  "InChI=1S/C5H8O6/c6-3(7)1-2-5(10,11)4(8)9/h10-11H,1-2H2,(H,6,7)(H,8,9)" 
U5C InChIKey         InChI                1.06  FFGNAYMZNXXDAW-UHFFFAOYSA-N                                             
U5C SMILES_CANONICAL CACTVS               3.385 "OC(=O)CCC(O)(O)C(O)=O"                                                 
U5C SMILES           CACTVS               3.385 "OC(=O)CCC(O)(O)C(O)=O"                                                 
U5C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CC(C(=O)O)(O)O)C(=O)O"                                               
U5C SMILES           "OpenEye OEToolkits" 2.0.7 "C(CC(C(=O)O)(O)O)C(=O)O"                                               
# 
_pdbx_chem_comp_identifier.comp_id           U5C 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2,2-bis(oxidanyl)pentanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
U5C "Create component" 2023-05-03 PDBE 
U5C "Initial release"  2023-08-09 RCSB 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 U5C 2,2-dihydroxyglutarate           AUTHOR ? 
2 U5C "2,2-dihydroxypentanedioic acid" AUTHOR ? 
# 
