data_QFC
# 
_chem_comp.id                                    QFC 
_chem_comp.name                                  Mezigdomide 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H30 F N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-08 
_chem_comp.pdbx_modified_date                    2022-07-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        567.610 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     QFC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8D7U 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QFC N1  N1  N 0 1 N N N 142.747 143.106 65.931 -4.379  -1.492 -0.717 N1  QFC 1  
QFC N3  N2  N 0 1 N N N 132.697 140.972 72.449 9.681   -1.649 1.135  N3  QFC 2  
QFC C4  C1  C 0 1 Y N N 147.738 143.915 67.414 -8.520  0.663  -0.722 C4  QFC 3  
QFC C5  C2  C 0 1 Y N N 146.432 144.348 67.615 -8.298  -0.414 0.130  C5  QFC 4  
QFC C6  C3  C 0 1 N N N 144.597 144.704 66.028 -5.988  -0.109 0.505  C6  QFC 5  
QFC C7  C4  C 0 1 N N N 143.656 143.927 65.130 -4.657  -0.861 0.581  C7  QFC 6  
QFC C8  C5  C 0 1 N N N 141.771 142.413 65.083 -3.071  -2.162 -0.708 C8  QFC 7  
QFC C10 C6  C 0 1 Y N N 140.071 144.256 65.324 -1.537  -0.753 0.680  C10 QFC 8  
QFC C13 C7  C 0 1 N N N 136.354 144.305 66.042 1.108   1.796  -0.192 C13 QFC 9  
QFC C15 C8  C 0 1 Y N N 136.657 146.307 68.051 3.334   3.316  0.034  C15 QFC 10 
QFC C17 C9  C 0 1 Y N N 135.913 147.099 70.207 5.714   3.570  0.163  C17 QFC 11 
QFC C20 C10 C 0 1 N N N 134.612 143.662 69.966 5.240   -0.043 -0.159 C20 QFC 12 
QFC C21 C11 C 0 1 Y N N 135.370 144.865 69.487 4.740   1.377  -0.063 C21 QFC 13 
QFC C22 C12 C 0 1 N N S 133.198 143.358 72.096 7.620   -1.110 -0.139 C22 QFC 14 
QFC C24 C13 C 0 1 N N N 130.881 142.601 72.562 9.581   -2.105 -1.304 C24 QFC 15 
QFC C26 C14 C 0 1 N N N 133.655 141.917 72.195 8.431   -1.165 1.129  C26 QFC 16 
QFC C28 C15 C 0 1 Y N N 139.317 142.008 65.501 -1.431  -0.555 -1.703 C28 QFC 17 
QFC N   N3  N 0 1 N N N 145.344 143.797 66.904 -7.058  -1.048 0.139  N   QFC 18 
QFC C   C16 C 0 1 Y N N 146.227 145.368 68.560 -9.313  -0.858 0.976  C   QFC 19 
QFC O   O1  O 0 1 N N N 136.047 144.033 67.416 2.380   1.145  -0.189 O   QFC 20 
QFC C1  C17 C 0 1 Y N N 147.246 145.942 69.272 -10.540 -0.232 0.969  C1  QFC 21 
QFC C11 C18 C 0 1 Y N N 138.784 144.706 65.551 -0.536  0.192  0.804  C11 QFC 22 
QFC C12 C19 C 0 1 Y N N 137.744 143.814 65.761 0.017   0.764  -0.326 C12 QFC 23 
QFC C14 C20 C 0 1 Y N N 136.048 145.086 68.291 3.478   1.938  -0.074 C14 QFC 24 
QFC C16 C21 C 0 1 Y N N 136.585 147.309 69.011 4.450   4.124  0.152  C16 QFC 25 
QFC C18 C22 C 0 1 Y N N 135.310 145.866 70.433 5.870   2.187  0.055  C18 QFC 26 
QFC C19 C23 C 0 1 N N N 134.525 145.374 71.587 7.064   1.320  0.037  C19 QFC 27 
QFC C2  C24 C 0 1 Y N N 148.545 145.490 69.049 -10.766 0.850  0.112  C2  QFC 28 
QFC C23 C25 C 0 1 N N N 131.749 143.458 71.656 8.565   -0.954 -1.335 C23 QFC 29 
QFC C25 C26 C 0 1 N N N 131.361 141.187 72.646 10.287  -2.100 0.026  C25 QFC 30 
QFC C27 C27 C 0 1 Y N N 138.029 142.459 65.728 -0.430  0.391  -1.580 C27 QFC 31 
QFC C29 C28 C 0 1 N N N 143.537 142.156 66.715 -5.449  -2.431 -1.083 C29 QFC 32 
QFC C3  C29 C 0 1 Y N N 148.785 144.479 68.122 -9.745  1.293  -0.734 C3  QFC 33 
QFC C30 C30 C 0 1 N N N 144.468 142.895 67.654 -6.780  -1.680 -1.159 C30 QFC 34 
QFC C31 C31 C 0 1 N N N 149.639 146.070 69.787 -12.040 1.503  0.102  C31 QFC 35 
QFC C9  C32 C 0 1 Y N N 140.359 142.900 65.300 -1.980  -1.131 -0.573 C9  QFC 36 
QFC F   F1  F 0 1 N N N 144.965 145.798 68.781 -9.093  -1.904 1.802  F   QFC 37 
QFC N2  N4  N 0 1 N N N 134.117 144.118 71.268 6.703   0.031  -0.086 N2  QFC 38 
QFC N4  N5  N 0 1 N N N 150.485 146.548 70.387 -13.051 2.022  0.093  N4  QFC 39 
QFC O1  O2  O 0 1 N N N 134.269 145.946 72.629 8.211   1.715  0.121  O1  QFC 40 
QFC O2  O3  O 0 1 N N N 130.610 140.248 72.894 11.425  -2.511 0.097  O2  QFC 41 
QFC O3  O4  O 0 1 N N N 134.838 141.610 72.091 7.943   -0.763 2.164  O3  QFC 42 
QFC H2  H2  H 0 1 N N N 133.008 140.023 72.495 10.169  -1.670 1.974  H2  QFC 43 
QFC H3  H3  H 0 1 N N N 147.937 143.131 66.698 -7.730  1.008  -1.372 H3  QFC 44 
QFC H4  H4  H 0 1 N N N 145.306 145.270 65.405 -6.210  0.335  1.475  H4  QFC 45 
QFC H5  H5  H 0 1 N N N 144.013 145.402 66.645 -5.920  0.676  -0.248 H5  QFC 46 
QFC H6  H6  H 0 1 N N N 144.244 143.275 64.467 -4.716  -1.628 1.353  H6  QFC 47 
QFC H7  H7  H 0 1 N N N 143.068 144.632 64.524 -3.857  -0.161 0.823  H7  QFC 48 
QFC H8  H8  H 0 1 N N N 141.810 141.337 65.309 -3.023  -2.853 0.133  H8  QFC 49 
QFC H9  H9  H 0 1 N N N 142.041 142.577 64.029 -2.938  -2.712 -1.639 H9  QFC 50 
QFC H10 H10 H 0 1 N N N 140.864 144.971 65.163 -1.970  -1.200 1.563  H10 QFC 51 
QFC H11 H11 H 0 1 N N N 136.298 145.388 65.856 0.977   2.343  0.742  H11 QFC 52 
QFC H12 H12 H 0 1 N N N 135.637 143.783 65.391 1.057   2.490  -1.030 H12 QFC 53 
QFC H13 H13 H 0 1 N N N 137.184 146.479 67.124 2.348   3.757  0.022  H13 QFC 54 
QFC H14 H14 H 0 1 N N N 135.859 147.881 70.950 6.582   4.207  0.255  H14 QFC 55 
QFC H15 H15 H 0 1 N N N 133.783 143.414 69.287 4.852   -0.632 0.672  H15 QFC 56 
QFC H16 H16 H 0 1 N N N 135.272 142.789 70.072 4.934   -0.487 -1.107 H16 QFC 57 
QFC H17 H17 H 0 1 N N N 133.248 143.776 73.112 7.047   -2.032 -0.245 H17 QFC 58 
QFC H18 H18 H 0 1 N N N 130.888 143.036 73.572 9.068   -3.057 -1.440 H18 QFC 59 
QFC H19 H19 H 0 1 N N N 129.853 142.602 72.170 10.309  -1.965 -2.103 H19 QFC 60 
QFC H20 H20 H 0 1 N N N 139.513 140.946 65.480 -1.780  -0.846 -2.683 H20 QFC 61 
QFC H21 H21 H 0 1 N N N 147.048 146.725 69.988 -11.327 -0.577 1.624  H21 QFC 62 
QFC H22 H22 H 0 1 N N N 138.586 145.768 65.565 -0.187  0.484  1.783  H22 QFC 63 
QFC H23 H23 H 0 1 N N N 137.057 148.262 68.824 4.332   5.194  0.236  H23 QFC 64 
QFC H24 H24 H 0 1 N N N 131.419 144.506 71.717 7.993   -0.997 -2.262 H24 QFC 65 
QFC H25 H25 H 0 1 N N N 131.656 143.104 70.619 9.086   0.001  -1.267 H25 QFC 66 
QFC H26 H26 H 0 1 N N N 137.234 141.744 65.882 -0.001  0.841  -2.463 H26 QFC 67 
QFC H27 H27 H 0 1 N N N 142.860 141.519 67.303 -5.227  -2.876 -2.053 H27 QFC 68 
QFC H28 H28 H 0 1 N N N 144.131 141.529 66.034 -5.517  -3.216 -0.329 H28 QFC 69 
QFC H29 H29 H 0 1 N N N 149.794 144.133 67.954 -9.916  2.129  -1.396 H29 QFC 70 
QFC H30 H30 H 0 1 N N N 143.871 143.481 68.368 -7.579  -2.379 -1.401 H30 QFC 71 
QFC H31 H31 H 0 1 N N N 145.083 142.166 68.202 -6.721  -0.913 -1.931 H31 QFC 72 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QFC C8  C9  SING N N 1  
QFC C8  N1  SING N N 2  
QFC C7  N1  SING N N 3  
QFC C7  C6  SING N N 4  
QFC C9  C10 DOUB Y N 5  
QFC C9  C28 SING Y N 6  
QFC C10 C11 SING Y N 7  
QFC C28 C27 DOUB Y N 8  
QFC C11 C12 DOUB Y N 9  
QFC C27 C12 SING Y N 10 
QFC C12 C13 SING N N 11 
QFC N1  C29 SING N N 12 
QFC C6  N   SING N N 13 
QFC C13 O   SING N N 14 
QFC C29 C30 SING N N 15 
QFC N   C5  SING N N 16 
QFC N   C30 SING N N 17 
QFC C4  C5  DOUB Y N 18 
QFC C4  C3  SING Y N 19 
QFC O   C14 SING N N 20 
QFC C5  C   SING Y N 21 
QFC C15 C14 DOUB Y N 22 
QFC C15 C16 SING Y N 23 
QFC C3  C2  DOUB Y N 24 
QFC C14 C21 SING Y N 25 
QFC C   F   SING N N 26 
QFC C   C1  DOUB Y N 27 
QFC C16 C17 DOUB Y N 28 
QFC C2  C1  SING Y N 29 
QFC C2  C31 SING N N 30 
QFC C21 C20 SING N N 31 
QFC C21 C18 DOUB Y N 32 
QFC C31 N4  TRIP N N 33 
QFC C20 N2  SING N N 34 
QFC C17 C18 SING Y N 35 
QFC C18 C19 SING N N 36 
QFC N2  C19 SING N N 37 
QFC N2  C22 SING N N 38 
QFC C19 O1  DOUB N N 39 
QFC C23 C22 SING N N 40 
QFC C23 C24 SING N N 41 
QFC O3  C26 DOUB N N 42 
QFC C22 C26 SING N N 43 
QFC C26 N3  SING N N 44 
QFC N3  C25 SING N N 45 
QFC C24 C25 SING N N 46 
QFC C25 O2  DOUB N N 47 
QFC N3  H2  SING N N 48 
QFC C4  H3  SING N N 49 
QFC C6  H4  SING N N 50 
QFC C6  H5  SING N N 51 
QFC C7  H6  SING N N 52 
QFC C7  H7  SING N N 53 
QFC C8  H8  SING N N 54 
QFC C8  H9  SING N N 55 
QFC C10 H10 SING N N 56 
QFC C13 H11 SING N N 57 
QFC C13 H12 SING N N 58 
QFC C15 H13 SING N N 59 
QFC C17 H14 SING N N 60 
QFC C20 H15 SING N N 61 
QFC C20 H16 SING N N 62 
QFC C22 H17 SING N N 63 
QFC C24 H18 SING N N 64 
QFC C24 H19 SING N N 65 
QFC C28 H20 SING N N 66 
QFC C1  H21 SING N N 67 
QFC C11 H22 SING N N 68 
QFC C16 H23 SING N N 69 
QFC C23 H24 SING N N 70 
QFC C23 H25 SING N N 71 
QFC C27 H26 SING N N 72 
QFC C29 H27 SING N N 73 
QFC C29 H28 SING N N 74 
QFC C3  H29 SING N N 75 
QFC C30 H30 SING N N 76 
QFC C30 H31 SING N N 77 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QFC SMILES           ACDLabs              12.01 "O=C1NC(=O)CCC1N1Cc2c(cccc2OCc2ccc(cc2)CN2CCN(CC2)c2ccc(C#N)cc2F)C1=O"                                                                                                                                           
QFC InChI            InChI                1.03  "InChI=1S/C32H30FN5O4/c33-26-16-23(17-34)8-9-27(26)37-14-12-36(13-15-37)18-21-4-6-22(7-5-21)20-42-29-3-1-2-24-25(29)19-38(32(24)41)28-10-11-30(39)35-31(28)40/h1-9,16,28H,10-15,18-20H2,(H,35,39,40)/t28-/m0/s1" 
QFC InChIKey         InChI                1.03  YTINZZFBHWSAGL-NDEPHWFRSA-N                                                                                                                                                                                      
QFC SMILES_CANONICAL CACTVS               3.385 "Fc1cc(ccc1N2CCN(CC2)Cc3ccc(COc4cccc5C(=O)N(Cc45)[C@H]6CCC(=O)NC6=O)cc3)C#N"                                                                                                                                     
QFC SMILES           CACTVS               3.385 "Fc1cc(ccc1N2CCN(CC2)Cc3ccc(COc4cccc5C(=O)N(Cc45)[CH]6CCC(=O)NC6=O)cc3)C#N"                                                                                                                                      
QFC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)OCc3ccc(cc3)CN4CCN(CC4)c5ccc(cc5F)C#N)CN(C2=O)[C@H]6CCC(=O)NC6=O"                                                                                                                                   
QFC SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)OCc3ccc(cc3)CN4CCN(CC4)c5ccc(cc5F)C#N)CN(C2=O)C6CCC(=O)NC6=O"                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
QFC "SYSTEMATIC NAME" ACDLabs              12.01 "4-[4-({4-[({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-4-yl}oxy)methyl]phenyl}methyl)piperazin-1-yl]-3-fluorobenzonitrile"                           
QFC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[4-[[4-[[2-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-1-oxidanylidene-3~{H}-isoindol-4-yl]oxymethyl]phenyl]methyl]piperazin-1-yl]-3-fluoranyl-benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QFC "Create component" 2022-06-08 RCSB 
QFC "Initial release"  2022-07-20 RCSB 
# 
