data_OJC
# 
_chem_comp.id                                    OJC 
_chem_comp.name                                  "(2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H21 N5 O13 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-06 
_chem_comp.pdbx_modified_date                    2022-09-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        541.300 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OJC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UXS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OJC N   N1  N 0 1 Y N N -15.106 27.089 -18.720 -15.106 27.089 -18.720 N   OJC 1  
OJC C   C1  C 0 1 Y N N -14.126 27.140 -17.809 -14.126 27.140 -17.809 C   OJC 2  
OJC O   O1  O 0 1 N N N -14.687 29.872 -13.874 -14.687 29.872 -13.874 O   OJC 3  
OJC C1  C2  C 0 1 Y N N -16.019 28.082 -18.749 -16.019 28.082 -18.749 C1  OJC 4  
OJC C2  C3  C 0 1 Y N N -15.866 29.136 -17.827 -15.866 29.136 -17.827 C2  OJC 5  
OJC C3  C4  C 0 1 Y N N -14.792 29.055 -16.964 -14.792 29.055 -16.964 C3  OJC 6  
OJC C10 C5  C 0 1 N N N -11.915 34.702 -12.145 -11.915 34.702 -12.145 C10 OJC 7  
OJC C11 C6  C 0 1 N N R -11.154 33.724 -11.283 -11.154 33.724 -11.283 C11 OJC 8  
OJC C12 C7  C 0 1 N N S -9.886  33.239 -11.993 -9.886  33.239 -11.993 C12 OJC 9  
OJC C13 C8  C 0 1 N N R -9.962  31.717 -11.869 -9.962  31.717 -11.869 C13 OJC 10 
OJC C14 C9  C 0 1 N N S -11.468 31.487 -11.802 -11.468 31.487 -11.802 C14 OJC 11 
OJC C4  C10 C 0 1 Y N N -15.982 30.851 -16.587 -15.982 30.851 -16.587 C4  OJC 12 
OJC C5  C11 C 0 1 N N R -14.056 30.451 -14.998 -14.056 30.451 -14.998 C5  OJC 13 
OJC C6  C12 C 0 1 N N R -13.902 31.930 -14.629 -13.902 31.930 -14.629 C6  OJC 14 
OJC C7  C13 C 0 1 N N S -13.420 31.774 -13.184 -13.420 31.774 -13.184 C7  OJC 15 
OJC C8  C14 C 0 1 N N R -14.201 30.554 -12.692 -14.201 30.554 -12.692 C8  OJC 16 
OJC C9  C15 C 0 1 N N N -15.374 30.869 -11.798 -15.374 30.869 -11.798 C9  OJC 17 
OJC N1  N2  N 0 1 Y N N -13.883 28.080 -16.896 -13.883 28.080 -16.896 N1  OJC 18 
OJC N2  N3  N 0 1 Y N N -14.877 30.167 -16.152 -14.877 30.167 -16.152 N2  OJC 19 
OJC N3  N4  N 0 1 Y N N -16.616 30.275 -17.582 -16.616 30.275 -17.582 N3  OJC 20 
OJC N4  N5  N 0 1 N N N -17.037 28.002 -19.629 -17.037 28.002 -19.629 N4  OJC 21 
OJC O1  O2  O 0 1 N N N -16.121 31.983 -12.361 -16.121 31.983 -12.361 O1  OJC 22 
OJC O10 O3  O 0 1 N N N -9.331  31.182 -10.709 -9.331  31.182 -10.709 O10 OJC 23 
OJC O11 O4  O 0 1 N N N -8.707  33.768 -11.397 -8.707  33.768 -11.397 O11 OJC 24 
OJC O12 O5  O 0 1 N N N -12.980 32.579 -15.481 -12.980 32.579 -15.481 O12 OJC 25 
OJC O2  O6  O 0 1 N N N -15.765 33.436 -10.275 -15.765 33.436 -10.275 O2  OJC 26 
OJC O3  O7  O 0 1 N N N -17.619 33.947 -11.970 -17.619 33.947 -11.970 O3  OJC 27 
OJC O4  O8  O 0 1 N N N -15.209 34.296 -12.565 -15.209 34.296 -12.565 O4  OJC 28 
OJC O5  O9  O 0 1 N N N -15.185 36.530 -11.384 -15.185 36.530 -11.384 O5  OJC 29 
OJC O6  O10 O 0 1 N N N -13.988 36.124 -13.617 -13.988 36.124 -13.617 O6  OJC 30 
OJC O7  O11 O 0 1 N N N -13.126 35.152 -11.506 -13.126 35.152 -11.506 O7  OJC 31 
OJC O8  O12 O 0 1 N N N -11.948 32.555 -11.004 -11.948 32.555 -11.004 O8  OJC 32 
OJC O9  O13 O 0 1 N N N -12.003 31.532 -13.117 -12.003 31.532 -13.117 O9  OJC 33 
OJC P   P1  P 0 1 N N N -16.211 33.437 -11.676 -16.211 33.437 -11.676 P   OJC 34 
OJC P1  P2  P 0 1 N N N -14.404 35.642 -12.283 -14.404 35.642 -12.283 P1  OJC 35 
OJC H8  H1  H 0 1 N N N -13.439 26.306 -17.815 -13.439 26.306 -17.815 H8  OJC 36 
OJC H14 H2  H 0 1 N N N -12.175 34.212 -13.095 -12.175 34.212 -13.095 H14 OJC 37 
OJC H15 H3  H 0 1 N N N -11.274 35.573 -12.346 -11.274 35.573 -12.346 H15 OJC 38 
OJC H4  H4  H 0 1 N N N -10.868 34.219 -10.343 -10.868 34.219 -10.343 H4  OJC 39 
OJC H5  H5  H 0 1 N N N -9.941  33.517 -13.056 -9.941  33.517 -13.056 H5  OJC 40 
OJC H6  H6  H 0 1 N N N -9.561  31.255 -12.783 -9.561  31.255 -12.783 H6  OJC 41 
OJC H7  H7  H 0 1 N N N -11.671 30.516 -11.327 -11.671 30.516 -11.327 H7  OJC 42 
OJC H9  H8  H 0 1 N N N -16.304 31.784 -16.149 -16.304 31.784 -16.149 H9  OJC 43 
OJC H   H9  H 0 1 N N N -13.055 30.018 -15.138 -13.055 30.018 -15.138 H   OJC 44 
OJC H1  H10 H 0 1 N N N -14.885 32.424 -14.644 -14.885 32.424 -14.644 H1  OJC 45 
OJC H2  H11 H 0 1 N N N -13.701 32.661 -12.597 -13.701 32.661 -12.597 H2  OJC 46 
OJC H3  H12 H 0 1 N N N -13.509 29.895 -12.147 -13.509 29.895 -12.147 H3  OJC 47 
OJC H10 H13 H 0 1 N N N -16.028 29.987 -11.725 -16.028 29.987 -11.725 H10 OJC 48 
OJC H11 H14 H 0 1 N N N -15.010 31.139 -10.796 -15.010 31.139 -10.796 H11 OJC 49 
OJC H20 H15 H 0 1 N N N -16.952 27.160 -20.162 -16.952 27.160 -20.162 H20 OJC 50 
OJC H19 H16 H 0 1 N N N -17.906 27.997 -19.134 -17.906 27.997 -19.134 H19 OJC 51 
OJC H16 H17 H 0 1 N N N -9.422  30.236 -10.706 -9.422  30.236 -10.706 H16 OJC 52 
OJC H17 H18 H 0 1 N N N -8.698  34.713 -11.495 -8.698  34.713 -11.495 H17 OJC 53 
OJC H18 H19 H 0 1 N N N -12.905 33.492 -15.230 -12.905 33.492 -15.230 H18 OJC 54 
OJC H12 H20 H 0 1 N N N -18.037 34.209 -11.158 -18.037 34.209 -11.158 H12 OJC 55 
OJC H13 H21 H 0 1 N N N -14.297 37.013 -13.743 -14.297 37.013 -13.743 H13 OJC 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OJC N4  C1  SING N N 1  
OJC C1  N   DOUB Y N 2  
OJC C1  C2  SING Y N 3  
OJC N   C   SING Y N 4  
OJC C2  N3  SING Y N 5  
OJC C2  C3  DOUB Y N 6  
OJC C   N1  DOUB Y N 7  
OJC N3  C4  DOUB Y N 8  
OJC C3  N1  SING Y N 9  
OJC C3  N2  SING Y N 10 
OJC C4  N2  SING Y N 11 
OJC N2  C5  SING N N 12 
OJC O12 C6  SING N N 13 
OJC C5  C6  SING N N 14 
OJC C5  O   SING N N 15 
OJC C6  C7  SING N N 16 
OJC O   C8  SING N N 17 
OJC O6  P1  SING N N 18 
OJC C7  O9  SING N N 19 
OJC C7  C8  SING N N 20 
OJC O9  C14 SING N N 21 
OJC C8  C9  SING N N 22 
OJC O4  P1  SING N N 23 
OJC O4  P   SING N N 24 
OJC O1  C9  SING N N 25 
OJC O1  P   SING N N 26 
OJC P1  O7  SING N N 27 
OJC P1  O5  DOUB N N 28 
OJC C10 O7  SING N N 29 
OJC C10 C11 SING N N 30 
OJC C12 C13 SING N N 31 
OJC C12 O11 SING N N 32 
OJC C12 C11 SING N N 33 
OJC O3  P   SING N N 34 
OJC C13 C14 SING N N 35 
OJC C13 O10 SING N N 36 
OJC C14 O8  SING N N 37 
OJC P   O2  DOUB N N 38 
OJC C11 O8  SING N N 39 
OJC C   H8  SING N N 40 
OJC C10 H14 SING N N 41 
OJC C10 H15 SING N N 42 
OJC C11 H4  SING N N 43 
OJC C12 H5  SING N N 44 
OJC C13 H6  SING N N 45 
OJC C14 H7  SING N N 46 
OJC C4  H9  SING N N 47 
OJC C5  H   SING N N 48 
OJC C6  H1  SING N N 49 
OJC C7  H2  SING N N 50 
OJC C8  H3  SING N N 51 
OJC C9  H10 SING N N 52 
OJC C9  H11 SING N N 53 
OJC N4  H20 SING N N 54 
OJC N4  H19 SING N N 55 
OJC O10 H16 SING N N 56 
OJC O11 H17 SING N N 57 
OJC O12 H18 SING N N 58 
OJC O3  H12 SING N N 59 
OJC O6  H13 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OJC SMILES           ACDLabs              12.01 "Nc1ncnc2c1ncn2C1OC2COP(=O)(O)OP(=O)(O)OCC3OC(OC2C1O)C(O)C3O"                                                                                                                                                                          
OJC InChI            InChI                1.03  "InChI=1S/C15H21N5O13P2/c16-12-7-13(18-3-17-12)20(4-19-7)14-10(23)11-6(30-14)2-29-35(26,27)33-34(24,25)28-1-5-8(21)9(22)15(31-5)32-11/h3-6,8-11,14-15,21-23H,1-2H2,(H,24,25)(H,26,27)(H2,16,17,18)/t5-,6-,8-,9-,10-,11-,14-,15+/m1/s1" 
OJC InChIKey         InChI                1.03  NDSLKXAJVDJCEG-ZQSHOCFMSA-N                                                                                                                                                                                                            
OJC SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@@H](O[C@H]4[C@H]3O)[C@H](O)[C@@H]5O"                                                                                                                                
OJC SMILES           CACTVS               3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH](O[CH]4[CH]3O)[CH](O)[CH]5O"                                                                                                                                            
OJC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(OP(=O)(OC[C@@H]5[C@H]([C@H]([C@@H](O5)O4)O)O)O)O)O)N"                                                                                                                           
OJC SMILES           "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OP(=O)(OCC5C(C(C(O5)O4)O)O)O)O)O)N"                                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OJC "SYSTEMATIC NAME" ACDLabs              12.01 "(2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione"     
OJC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},3~{S},4~{R},5~{R},7~{R},15~{R},16~{S},17~{R})-5-(6-aminopurin-9-yl)-10,12-bis(oxidanyl)-10,12-bis(oxidanylidene)-2,6,9,11,13,18-hexaoxa-10$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{3,7}]octadecane-4,16,17-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OJC "Create component" 2022-05-06 RCSB 
OJC "Initial release"  2022-09-07 RCSB 
# 
