data_M5C
# 
_chem_comp.id                                    M5C 
_chem_comp.name                                  "DIMETHYL(1S,2S,4S,5S)-4-(2-AMINOETHOXY)-5-HYDROXYCYCLOHEXANE-1,2-DICARBOXYLATE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H21 N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-09-10 
_chem_comp.pdbx_modified_date                    2018-01-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        275.298 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M5C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2XR5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M5C OAD  OAD  O 0 1 N N N -3.270 20.526 33.781 -2.631 1.254  0.447  OAD  M5C 1  
M5C CAT  CAT  C 0 1 N N N -2.433 20.149 32.984 -1.503 1.626  0.223  CAT  M5C 2  
M5C OAO  OAO  O 0 1 N N N -2.720 18.969 32.178 -1.253 2.930  0.030  OAO  M5C 3  
M5C CAA  CAA  C 0 1 N N N -4.046 18.432 32.106 -2.385 3.837  0.104  CAA  M5C 4  
M5C CBC  CBC  C 0 1 N N S -1.188 20.966 32.797 -0.377 0.626  0.167  CBC  M5C 5  
M5C CBD  CBD  C 0 1 N N S -1.355 21.862 31.572 -0.928 -0.778 0.426  CBD  M5C 6  
M5C CAU  CAU  C 0 1 N N N -2.626 22.663 31.645 -1.954 -1.117 -0.625 CAU  M5C 7  
M5C OAP  OAP  O 0 1 N N N -2.562 24.114 31.538 -2.575 -2.306 -0.598 OAP  M5C 8  
M5C CAB  CAB  C 0 1 N N N -2.303 24.717 30.267 -3.550 -2.565 -1.643 CAB  M5C 9  
M5C OAE  OAE  O 0 1 N N N -3.721 22.110 31.714 -2.216 -0.318 -1.493 OAE  M5C 10 
M5C CAM  CAM  C 0 1 N N N 0.066  20.098 32.694 0.663  0.970  1.235  CAM  M5C 11 
M5C CAZ  CAZ  C 0 1 N N S 1.294  20.972 32.459 1.807  -0.045 1.179  CAZ  M5C 12 
M5C OAQ  OAQ  O 0 1 N N N 1.583  21.743 33.630 2.417  -0.004 -0.113 OAQ  M5C 13 
M5C CAL  CAL  C 0 1 N N N 2.979  21.781 33.935 3.807  -0.338 -0.110 CAL  M5C 14 
M5C CAJ  CAJ  C 0 1 N N N 3.462  23.232 33.941 4.353  -0.261 -1.537 CAJ  M5C 15 
M5C NAC  NAC  N 0 1 N N N 3.811  23.655 32.592 4.288  1.128  -2.012 NAC  M5C 16 
M5C CBA  CBA  C 0 1 N N S 1.090  21.920 31.270 1.255  -1.449 1.437  CBA  M5C 17 
M5C CAN  CAN  C 0 1 N N N -0.153 22.787 31.427 0.215  -1.793 0.370  CAN  M5C 18 
M5C OX0  OX0  O 0 1 N Y N 0.933  21.123 30.082 0.645  -1.491 2.728  OX0  M5C 19 
M5C HBC  HBC  H 0 1 N N N -1.046 21.595 33.688 0.088  0.657  -0.817 HBC  M5C 20 
M5C HAA1 HAA1 H 0 0 N N N -4.442 18.294 33.123 -2.840 3.769  1.091  HAA1 M5C 21 
M5C HAA2 HAA2 H 0 0 N N N -4.693 19.127 31.552 -2.044 4.858  -0.071 HAA2 M5C 22 
M5C HAA3 HAA3 H 0 0 N N N -4.021 17.462 31.588 -3.119 3.564  -0.655 HAA3 M5C 23 
M5C HBD  HBD  H 0 1 N N N -1.417 21.214 30.686 -1.394 -0.810 1.411  HBD  M5C 24 
M5C HAM1 HAM1 H 0 0 N N N 0.195  19.536 33.631 1.056  1.970  1.051  HAM1 M5C 25 
M5C HAM2 HAM2 H 0 0 N N N -0.047 19.402 31.849 0.198  0.938  2.220  HAM2 M5C 26 
M5C HAN1 HAN1 H 0 0 N N N -0.277 23.429 30.543 -0.178 -2.793 0.554  HAN1 M5C 27 
M5C HAN2 HAN2 H 0 0 N N N -0.059 23.433 32.312 0.680  -1.762 -0.615 HAN2 M5C 28 
M5C HAB1 HAB1 H 0 0 N N N -2.237 25.809 30.385 -4.343 -1.819 -1.591 HAB1 M5C 29 
M5C HAB2 HAB2 H 0 0 N N N -1.353 24.333 29.866 -3.063 -2.510 -2.616 HAB2 M5C 30 
M5C HAB3 HAB3 H 0 0 N N N -3.120 24.473 29.572 -3.976 -3.558 -1.504 HAB3 M5C 31 
M5C HAZ  HAZ  H 0 1 N N N 2.138  20.303 32.233 2.548  0.199  1.939  HAZ  M5C 32 
M5C HBA  HBA  H 0 1 N N N 1.964  22.585 31.212 2.070  -2.172 1.397  HBA  M5C 33 
M5C HAL1 HAL1 H 0 0 N N N 3.150  21.334 34.925 4.348  0.364  0.525  HAL1 M5C 34 
M5C HAL2 HAL2 H 0 0 N N N 3.535  21.213 33.175 3.936  -1.349 0.275  HAL2 M5C 35 
M5C HAJ1 HAJ1 H 0 0 N N N 2.660  23.878 34.326 5.388  -0.601 -1.548 HAJ1 M5C 36 
M5C HAJ2 HAJ2 H 0 0 N N N 4.352  23.310 34.582 3.754  -0.897 -2.190 HAJ2 M5C 37 
M5C HAC1 HAC1 H 0 0 N N N 3.891  24.651 32.565 4.781  1.747  -1.387 HAC1 M5C 38 
M5C HAC2 HAC2 H 0 0 N N N 4.684  23.243 32.329 4.643  1.205  -2.953 HAC2 M5C 39 
M5C HX0  HX0  H 0 1 N N N 0.898  21.691 29.321 0.273  -2.353 2.960  HX0  M5C 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M5C OAD CAT  DOUB N N 1  
M5C CAT OAO  SING N N 2  
M5C CAT CBC  SING N N 3  
M5C OAO CAA  SING N N 4  
M5C CBC CBD  SING N N 5  
M5C CBC CAM  SING N N 6  
M5C CBD CAU  SING N N 7  
M5C CBD CAN  SING N N 8  
M5C CAU OAP  SING N N 9  
M5C CAU OAE  DOUB N N 10 
M5C OAP CAB  SING N N 11 
M5C CAM CAZ  SING N N 12 
M5C CAZ OAQ  SING N N 13 
M5C CAZ CBA  SING N N 14 
M5C OAQ CAL  SING N N 15 
M5C CAL CAJ  SING N N 16 
M5C CAJ NAC  SING N N 17 
M5C CBA CAN  SING N N 18 
M5C CBA OX0  SING N N 19 
M5C CBC HBC  SING N N 20 
M5C CAA HAA1 SING N N 21 
M5C CAA HAA2 SING N N 22 
M5C CAA HAA3 SING N N 23 
M5C CBD HBD  SING N N 24 
M5C CAM HAM1 SING N N 25 
M5C CAM HAM2 SING N N 26 
M5C CAN HAN1 SING N N 27 
M5C CAN HAN2 SING N N 28 
M5C CAB HAB1 SING N N 29 
M5C CAB HAB2 SING N N 30 
M5C CAB HAB3 SING N N 31 
M5C CAZ HAZ  SING N N 32 
M5C CBA HBA  SING N N 33 
M5C CAL HAL1 SING N N 34 
M5C CAL HAL2 SING N N 35 
M5C CAJ HAJ1 SING N N 36 
M5C CAJ HAJ2 SING N N 37 
M5C NAC HAC1 SING N N 38 
M5C NAC HAC2 SING N N 39 
M5C OX0 HX0  SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M5C SMILES           ACDLabs              10.04 "O=C(OC)C1CC(OCCN)C(O)CC1C(=O)OC"                                                                                    
M5C SMILES_CANONICAL CACTVS               3.352 "COC(=O)[C@H]1C[C@H](O)[C@H](C[C@@H]1C(=O)OC)OCCN"                                                                   
M5C SMILES           CACTVS               3.352 "COC(=O)[CH]1C[CH](O)[CH](C[CH]1C(=O)OC)OCCN"                                                                        
M5C SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "COC(=O)[C@H]1C[C@@H]([C@H](C[C@@H]1C(=O)OC)OCCN)O"                                                                  
M5C SMILES           "OpenEye OEToolkits" 1.6.1 "COC(=O)C1CC(C(CC1C(=O)OC)OCCN)O"                                                                                    
M5C InChI            InChI                1.03  "InChI=1S/C12H21NO6/c1-17-11(15)7-5-9(14)10(19-4-3-13)6-8(7)12(16)18-2/h7-10,14H,3-6,13H2,1-2H3/t7-,8-,9-,10-/m0/s1" 
M5C InChIKey         InChI                1.03  WYAPMBKZVWWHIJ-XKNYDFJKSA-N                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
M5C "SYSTEMATIC NAME" ACDLabs              10.04 "dimethyl (1S,2S,4S,5S)-4-(2-aminoethoxy)-5-hydroxycyclohexane-1,2-dicarboxylate"  
M5C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "dimethyl (1S,2S,4S,5S)-4-(2-aminoethoxy)-5-hydroxy-cyclohexane-1,2-dicarboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M5C "Create component"  2010-09-10 EBI  
M5C "Modify descriptor" 2011-06-04 RCSB 
M5C "Initial release"   2018-01-24 RCSB 
# 
