data_J3C
#

_chem_comp.id                                   J3C
_chem_comp.name                                 "(7R,8R,9S)-2,3-dimethyl-9-phenyl-7,8,9,10-tetrahydroimidazo[1,2-h][1,7]naphthyridine-7,8-diol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H19 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-30
_chem_comp.pdbx_modified_date                   2021-08-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       309.362
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    J3C
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7EFL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J3C  C10  C1   C  0  1  N  N  N  -51.718  11.124   -7.031   5.550   0.482  -0.137  C10  J3C   1  
J3C  C11  C2   C  0  1  N  N  R  -50.686  18.441   -9.124  -1.746  -1.647  -0.412  C11  J3C   2  
J3C  C12  C3   C  0  1  N  N  S  -50.235  18.187   -7.658  -1.742  -0.439   0.534  C12  J3C   3  
J3C  C13  C4   C  0  1  Y  N  N  -49.147  19.019   -7.057  -2.966   0.405   0.289  C13  J3C   4  
J3C  C14  C5   C  0  1  Y  N  N  -49.228  19.354   -5.715  -4.060   0.297   1.128  C14  J3C   5  
J3C  C15  C6   C  0  1  Y  N  N  -48.240  20.115   -5.070  -5.183   1.071   0.903  C15  J3C   6  
J3C  C16  C7   C  0  1  Y  N  N  -47.120  20.544   -5.756  -5.212   1.954  -0.161  C16  J3C   7  
J3C  C17  C8   C  0  1  Y  N  N  -47.023  20.207   -7.099  -4.118   2.062  -0.999  C17  J3C   8  
J3C  C18  C9   C  0  1  Y  N  N  -48.014  19.447   -7.733  -2.993   1.292  -0.771  C18  J3C   9  
J3C  C1   C10  C  0  1  Y  N  N  -51.920  13.657   -8.945   3.115  -1.584  -0.259  C1   J3C  10  
J3C  C2   C11  C  0  1  Y  N  N  -51.902  14.855   -9.652   1.975  -2.303  -0.277  C2   J3C  11  
J3C  C3   C12  C  0  1  Y  N  N  -51.203  15.947   -9.154   0.728  -1.673  -0.099  C3   J3C  12  
J3C  C4   C13  C  0  1  Y  N  N  -50.535  15.801   -7.964   0.684  -0.324   0.083  C4   J3C  13  
J3C  C5   C14  C  0  1  Y  N  N  -50.592  14.588   -7.296   1.891   0.417   0.101  C5   J3C  14  
J3C  C6   C15  C  0  1  N  N  R  -51.198  17.220   -9.916  -0.522  -2.512  -0.110  C6   J3C  15  
J3C  C7   C16  C  0  1  Y  N  N  -50.358  12.946   -5.847   3.460   1.909   0.197  C7   J3C  16  
J3C  C8   C17  C  0  1  Y  N  N  -51.143  12.517   -6.915   4.067   0.719  -0.006  C8   J3C  17  
J3C  C9   C18  C  0  1  N  N  N  -49.931  12.148   -4.629   4.154   3.240   0.332  C9   J3C  18  
J3C  N1   N1   N  0  1  Y  N  N  -51.271  13.543   -7.785   3.085  -0.230  -0.071  N1   J3C  19  
J3C  N2   N2   N  0  1  Y  N  N  -50.034  14.225   -6.121   2.142   1.709   0.260  N2   J3C  20  
J3C  N3   N3   N  0  1  N  N  N  -49.832  16.817   -7.430  -0.532   0.345   0.253  N3   J3C  21  
J3C  O1   O1   O  0  1  N  N  N  -52.547  17.456  -10.353  -0.685  -3.130   1.168  O1   J3C  22  
J3C  O2   O2   O  0  1  N  N  N  -49.689  19.039   -9.964  -1.694  -1.195  -1.766  O2   J3C  23  
J3C  H1   H1   H  0  1  N  N  N  -51.003  10.474   -7.558   5.975   0.286   0.848  H1   J3C  24  
J3C  H2   H2   H  0  1  N  N  N  -51.907  10.721   -6.025   5.725  -0.376  -0.786  H2   J3C  25  
J3C  H3   H3   H  0  1  N  N  N  -52.662  11.163   -7.594   6.022   1.365  -0.567  H3   J3C  26  
J3C  H4   H4   H  0  1  N  N  N  -51.531  19.143   -9.065  -2.653  -2.231  -0.256  H4   J3C  27  
J3C  H5   H5   H  0  1  N  N  N  -51.129  18.361   -7.041  -1.729  -0.781   1.569  H5   J3C  28  
J3C  H6   H6   H  0  1  N  N  N  -50.081  19.018   -5.145  -4.037  -0.393   1.959  H6   J3C  29  
J3C  H7   H7   H  0  1  N  N  N  -48.357  20.368   -4.026  -6.037   0.987   1.558  H7   J3C  30  
J3C  H8   H8   H  0  1  N  N  N  -46.349  21.120   -5.266  -6.089   2.559  -0.336  H8   J3C  31  
J3C  H9   H9   H  0  1  N  N  N  -46.166  20.538   -7.667  -4.141   2.751  -1.830  H9   J3C  32  
J3C  H10  H10  H  0  1  N  N  N  -47.893  19.188   -8.774  -2.139   1.376  -1.426  H10  J3C  33  
J3C  H11  H11  H  0  1  N  N  N  -52.464  12.811   -9.339   4.063  -2.082  -0.395  H11  J3C  34  
J3C  H12  H12  H  0  1  N  N  N  -52.432  14.936  -10.589   2.018  -3.371  -0.428  H12  J3C  35  
J3C  H13  H13  H  0  1  N  N  N  -50.551  17.096  -10.797  -0.430  -3.284  -0.873  H13  J3C  36  
J3C  H14  H14  H  0  1  N  N  N  -49.302  12.776   -3.981   4.254   3.699  -0.651  H14  J3C  37  
J3C  H15  H15  H  0  1  N  N  N  -50.823  11.824   -4.072   3.568   3.892   0.980  H15  J3C  38  
J3C  H16  H16  H  0  1  N  N  N  -49.359  11.265   -4.951   5.143   3.091   0.766  H16  J3C  39  
J3C  H17  H17  H  0  1  N  N  N  -49.835  16.678   -6.440  -0.576   1.311   0.186  H17  J3C  40  
J3C  H18  H18  H  0  1  N  N  N  -52.583  18.267  -10.847   0.047  -3.709   1.422  H18  J3C  41  
J3C  H19  H19  H  0  1  N  N  N  -49.328  19.805   -9.532  -1.692  -1.908  -2.420  H19  J3C  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J3C  O1   C6   SING  N  N   1  
J3C  O2   C11  SING  N  N   2  
J3C  C6   C3   SING  N  N   3  
J3C  C6   C11  SING  N  N   4  
J3C  C2   C3   SING  Y  N   5  
J3C  C2   C1   DOUB  Y  N   6  
J3C  C3   C4   DOUB  Y  N   7  
J3C  C11  C12  SING  N  N   8  
J3C  C1   N1   SING  Y  N   9  
J3C  C4   N3   SING  N  N  10  
J3C  C4   C5   SING  Y  N  11  
J3C  N1   C5   SING  Y  N  12  
J3C  N1   C8   SING  Y  N  13  
J3C  C18  C17  DOUB  Y  N  14  
J3C  C18  C13  SING  Y  N  15  
J3C  C12  N3   SING  N  N  16  
J3C  C12  C13  SING  N  N  17  
J3C  C5   N2   DOUB  Y  N  18  
J3C  C17  C16  SING  Y  N  19  
J3C  C13  C14  DOUB  Y  N  20  
J3C  C10  C8   SING  N  N  21  
J3C  C8   C7   DOUB  Y  N  22  
J3C  N2   C7   SING  Y  N  23  
J3C  C7   C9   SING  N  N  24  
J3C  C16  C15  DOUB  Y  N  25  
J3C  C14  C15  SING  Y  N  26  
J3C  C10  H1   SING  N  N  27  
J3C  C10  H2   SING  N  N  28  
J3C  C10  H3   SING  N  N  29  
J3C  C11  H4   SING  N  N  30  
J3C  C12  H5   SING  N  N  31  
J3C  C14  H6   SING  N  N  32  
J3C  C15  H7   SING  N  N  33  
J3C  C16  H8   SING  N  N  34  
J3C  C17  H9   SING  N  N  35  
J3C  C18  H10  SING  N  N  36  
J3C  C1   H11  SING  N  N  37  
J3C  C2   H12  SING  N  N  38  
J3C  C6   H13  SING  N  N  39  
J3C  C9   H14  SING  N  N  40  
J3C  C9   H15  SING  N  N  41  
J3C  C9   H16  SING  N  N  42  
J3C  N3   H17  SING  N  N  43  
J3C  O1   H18  SING  N  N  44  
J3C  O2   H19  SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J3C  InChI             InChI                 1.03   "InChI=1S/C18H19N3O2/c1-10-11(2)21-9-8-13-15(18(21)19-10)20-14(17(23)16(13)22)12-6-4-3-5-7-12/h3-9,14,16-17,20,22-23H,1-2H3/t14-,16+,17+/m0/s1"  
J3C  InChIKey          InChI                 1.03   FHHGNULEXOWEKU-USXIJHARSA-N  
J3C  SMILES_CANONICAL  CACTVS                3.385  "Cc1nc2n(ccc3[C@@H](O)[C@H](O)[C@@H](Nc23)c4ccccc4)c1C"  
J3C  SMILES            CACTVS                3.385  "Cc1nc2n(ccc3[CH](O)[CH](O)[CH](Nc23)c4ccccc4)c1C"  
J3C  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1c(n2ccc3c(c2n1)N[C@H]([C@H]([C@@H]3O)O)c4ccccc4)C"  
J3C  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1c(n2ccc3c(c2n1)NC(C(C3O)O)c4ccccc4)C"  
#
_pdbx_chem_comp_identifier.comp_id          J3C
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(7~{R},8~{R},9~{S})-2,3-dimethyl-9-phenyl-7,8,9,10-tetrahydroimidazo[1,2-h][1,7]naphthyridine-7,8-diol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J3C  "Create component"  2021-03-30  PDBJ  
J3C  "Initial release"   2021-09-01  RCSB  
##
