data_B9C
#

_chem_comp.id                                   B9C
_chem_comp.name                                 "N-{2-[({3-[6-(piperazin-1-yl)pyridin-3-yl]-1H-indazol-5-yl}amino)methyl]phenyl}methanesulfonamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H27 N7 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-01-25
_chem_comp.pdbx_modified_date                   2019-07-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       477.582
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    B9C
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6J5L
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
B9C  CAA  C1   C  0  1  N  N  N  -19.222  -17.766  -27.632  -5.020   2.664   0.490  CAA  B9C   1  
B9C  CAB  C2   C  0  1  N  N  N  -19.175  -17.392  -29.029  -6.017   3.824   0.475  CAB  B9C   2  
B9C  NAC  N1   N  0  1  N  N  N  -19.305  -15.946  -29.055  -6.579   3.967  -0.875  NAC  B9C   3  
B9C  CAD  C3   C  0  1  N  N  N  -17.984  -15.446  -28.547  -7.260   2.734  -1.292  CAD  B9C   4  
B9C  CAE  C4   C  0  1  N  N  N  -17.861  -15.764  -27.085  -6.262   1.573  -1.278  CAE  B9C   5  
B9C  NAF  N2   N  0  1  N  N  N  -18.116  -17.200  -26.831  -5.701   1.430   0.073  NAF  B9C   6  
B9C  CAI  C5   C  0  1  Y  N  N  -17.574  -17.877  -25.771  -4.842   0.340   0.142  CAI  B9C   7  
B9C  CAH  C6   C  0  1  Y  N  N  -17.325  -17.166  -24.598  -5.305  -0.923  -0.220  CAH  B9C   8  
B9C  CAG  C7   C  0  1  Y  N  N  -16.810  -17.766  -23.462  -4.446  -2.001  -0.149  CAG  B9C   9  
B9C  NAJ  N3   N  0  1  Y  N  N  -17.320  -19.202  -25.751  -3.594   0.516   0.547  NAJ  B9C  10  
B9C  CAK  C8   C  0  1  Y  N  N  -16.842  -19.832  -24.591  -2.743  -0.488   0.629  CAK  B9C  11  
B9C  CAV  C9   C  0  1  Y  N  N  -16.535  -19.109  -23.430  -3.134  -1.780   0.289  CAV  B9C  12  
B9C  CAZ  C10  C  0  1  Y  N  N  -16.068  -19.717  -22.298  -2.174  -2.905   0.383  CAZ  B9C  13  
B9C  CBE  C11  C  0  1  Y  N  N  -15.771  -19.195  -21.088  -0.733  -2.839   0.119  CBE  B9C  14  
B9C  CBD  C12  C  0  1  Y  N  N  -15.756  -17.947  -20.629   0.135  -1.814  -0.269  CBD  B9C  15  
B9C  NBA  N4   N  0  1  Y  N  N  -15.895  -21.025  -22.217  -2.458  -4.139   0.724  NBA  B9C  16  
B9C  NBB  N5   N  0  1  Y  N  N  -15.453  -21.320  -20.998  -1.297  -4.919   0.703  NBB  B9C  17  
B9C  CBF  C13  C  0  1  Y  N  N  -15.378  -20.196  -20.291  -0.231  -4.136   0.333  CBF  B9C  18  
B9C  CBG  C14  C  0  1  Y  N  N  -15.002  -19.996  -19.013   1.128  -4.386   0.156  CBG  B9C  19  
B9C  CBH  C15  C  0  1  Y  N  N  -14.977  -18.701  -18.490   1.966  -3.378  -0.222  CBH  B9C  20  
B9C  CBC  C16  C  0  1  Y  N  N  -15.364  -17.659  -19.327   1.478  -2.088  -0.437  CBC  B9C  21  
B9C  NAY  N6   N  0  1  N  N  N  -15.397  -16.397  -18.907   2.353  -1.068  -0.826  NAY  B9C  22  
B9C  CAX  C17  C  0  1  N  N  N  -16.489  -15.913  -18.063   3.779  -1.355  -1.005  CAX  B9C  23  
B9C  CAW  C18  C  0  1  Y  N  N  -17.719  -15.783  -18.730   4.496  -0.096  -1.422  CAW  B9C  24  
B9C  CAU  C19  C  0  1  Y  N  N  -18.822  -16.344  -18.089   4.808   0.114  -2.750  CAU  B9C  25  
B9C  CAT  C20  C  0  1  Y  N  N  -20.114  -16.279  -18.604   5.466   1.268  -3.133  CAT  B9C  26  
B9C  CAS  C21  C  0  1  Y  N  N  -20.287  -15.614  -19.789   5.813   2.216  -2.188  CAS  B9C  27  
B9C  CAR  C22  C  0  1  Y  N  N  -19.218  -15.021  -20.443   5.503   2.013  -0.858  CAR  B9C  28  
B9C  CAQ  C23  C  0  1  Y  N  N  -17.938  -15.091  -19.930   4.838   0.857  -0.470  CAQ  B9C  29  
B9C  NAP  N7   N  0  1  N  N  N  -16.894  -14.560  -20.599   4.523   0.647   0.874  NAP  B9C  30  
B9C  SAO  S1   S  0  1  N  N  N  -16.903  -12.954  -21.050   4.098   1.929   1.834  SAO  B9C  31  
B9C  OAL  O1   O  0  1  N  N  N  -15.890  -12.736  -22.141   3.763   1.336   3.082  OAL  B9C  32  
B9C  OAM  O2   O  0  1  N  N  N  -18.275  -12.470  -21.521   5.193   2.828   1.721  OAM  B9C  33  
B9C  CAN  C24  C  0  1  N  N  N  -16.495  -12.037  -19.596   2.621   2.620   1.041  CAN  B9C  34  
B9C  H1   H1   H  0  1  N  N  N  -20.174  -17.413  -27.209  -4.202   2.879  -0.199  H1   B9C  35  
B9C  H2   H2   H  0  1  N  N  N  -19.175  -18.863  -27.564  -4.623   2.538   1.497  H2   B9C  36  
B9C  H3   H3   H  0  1  N  N  N  -20.004  -17.861  -29.579  -6.821   3.622   1.184  H3   B9C  37  
B9C  H4   H4   H  0  1  N  N  N  -18.218  -17.699  -29.476  -5.508   4.746   0.757  H4   B9C  38  
B9C  H5   H5   H  0  1  N  N  N  -19.472  -15.622  -29.986  -7.202   4.759  -0.926  H5   B9C  39  
B9C  H7   H7   H  0  1  N  N  N  -17.169  -15.936  -29.099  -8.078   2.519  -0.604  H7   B9C  40  
B9C  H8   H8   H  0  1  N  N  N  -17.923  -14.357  -28.692  -7.656   2.860  -2.300  H8   B9C  41  
B9C  H9   H9   H  0  1  N  N  N  -16.845  -15.514  -26.747  -6.772   0.652  -1.559  H9   B9C  42  
B9C  H10  H10  H  0  1  N  N  N  -18.592  -15.164  -26.524  -5.459   1.775  -1.986  H10  B9C  43  
B9C  H11  H11  H  0  1  N  N  N  -17.542  -16.108  -24.575  -6.323  -1.056  -0.553  H11  B9C  44  
B9C  H12  H12  H  0  1  N  N  N  -16.621  -17.165  -22.585  -4.778  -2.992  -0.424  H12  B9C  45  
B9C  H13  H13  H  0  1  N  N  N  -16.707  -20.904  -24.593  -1.732  -0.306   0.964  H13  B9C  46  
B9C  H14  H14  H  0  1  N  N  N  -16.055  -17.140  -21.282  -0.243  -0.816  -0.435  H14  B9C  47  
B9C  H16  H16  H  0  1  N  N  N  -14.720  -20.835  -18.394   1.518  -5.379   0.320  H16  B9C  48  
B9C  H17  H17  H  0  1  N  N  N  -14.668  -18.515  -17.472   3.018  -3.580  -0.357  H17  B9C  49  
B9C  H18  H18  H  0  1  N  N  N  -14.552  -16.246  -18.394   2.016  -0.171  -0.976  H18  B9C  50  
B9C  H19  H19  H  0  1  N  N  N  -16.621  -16.620  -17.231   4.197  -1.718  -0.067  H19  B9C  51  
B9C  H20  H20  H  0  1  N  N  N  -16.206  -14.927  -17.665   3.902  -2.115  -1.776  H20  B9C  52  
B9C  H21  H21  H  0  1  N  N  N  -18.667  -16.853  -17.149   4.539  -0.625  -3.491  H21  B9C  53  
B9C  H22  H22  H  0  1  N  N  N  -20.947  -16.735  -18.089   5.710   1.430  -4.173  H22  B9C  54  
B9C  H23  H23  H  0  1  N  N  N  -21.274  -15.550  -20.222   6.328   3.116  -2.490  H23  B9C  55  
B9C  H24  H24  H  0  1  N  N  N  -19.390  -14.495  -21.370   5.770   2.755  -0.120  H24  B9C  56  
B9C  H25  H25  H  0  1  N  N  N  -16.792  -15.093  -21.439   4.552  -0.248   1.246  H25  B9C  57  
B9C  H26  H26  H  0  1  N  N  N  -17.255  -12.220  -18.822   1.839   1.861   1.005  H26  B9C  58  
B9C  H27  H27  H  0  1  N  N  N  -15.510  -12.356  -19.226   2.269   3.478   1.612  H27  B9C  59  
B9C  H28  H28  H  0  1  N  N  N  -16.466  -10.964  -19.836   2.867   2.935   0.026  H28  B9C  60  
B9C  H6   H6   H  0  1  N  N  N  -15.217  -22.234  -20.668  -1.252  -5.864   0.918  H6   B9C  61  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
B9C  NAC  CAB  SING  N  N   1  
B9C  NAC  CAD  SING  N  N   2  
B9C  CAB  CAA  SING  N  N   3  
B9C  CAD  CAE  SING  N  N   4  
B9C  CAA  NAF  SING  N  N   5  
B9C  CAE  NAF  SING  N  N   6  
B9C  NAF  CAI  SING  N  N   7  
B9C  CAI  NAJ  DOUB  Y  N   8  
B9C  CAI  CAH  SING  Y  N   9  
B9C  NAJ  CAK  SING  Y  N  10  
B9C  CAH  CAG  DOUB  Y  N  11  
B9C  CAK  CAV  DOUB  Y  N  12  
B9C  CAG  CAV  SING  Y  N  13  
B9C  CAV  CAZ  SING  N  N  14  
B9C  CAZ  NBA  DOUB  Y  N  15  
B9C  CAZ  CBE  SING  Y  N  16  
B9C  NBA  NBB  SING  Y  N  17  
B9C  OAL  SAO  DOUB  N  N  18  
B9C  OAM  SAO  DOUB  N  N  19  
B9C  CBE  CBD  SING  Y  N  20  
B9C  CBE  CBF  DOUB  Y  N  21  
B9C  SAO  NAP  SING  N  N  22  
B9C  SAO  CAN  SING  N  N  23  
B9C  NBB  CBF  SING  Y  N  24  
B9C  CBD  CBC  DOUB  Y  N  25  
B9C  NAP  CAQ  SING  N  N  26  
B9C  CAR  CAQ  DOUB  Y  N  27  
B9C  CAR  CAS  SING  Y  N  28  
B9C  CBF  CBG  SING  Y  N  29  
B9C  CAQ  CAW  SING  Y  N  30  
B9C  CAS  CAT  DOUB  Y  N  31  
B9C  CBC  NAY  SING  N  N  32  
B9C  CBC  CBH  SING  Y  N  33  
B9C  CBG  CBH  DOUB  Y  N  34  
B9C  NAY  CAX  SING  N  N  35  
B9C  CAW  CAU  DOUB  Y  N  36  
B9C  CAW  CAX  SING  N  N  37  
B9C  CAT  CAU  SING  Y  N  38  
B9C  CAA  H1   SING  N  N  39  
B9C  CAA  H2   SING  N  N  40  
B9C  CAB  H3   SING  N  N  41  
B9C  CAB  H4   SING  N  N  42  
B9C  NAC  H5   SING  N  N  43  
B9C  CAD  H7   SING  N  N  44  
B9C  CAD  H8   SING  N  N  45  
B9C  CAE  H9   SING  N  N  46  
B9C  CAE  H10  SING  N  N  47  
B9C  CAH  H11  SING  N  N  48  
B9C  CAG  H12  SING  N  N  49  
B9C  CAK  H13  SING  N  N  50  
B9C  CBD  H14  SING  N  N  51  
B9C  CBG  H16  SING  N  N  52  
B9C  CBH  H17  SING  N  N  53  
B9C  NAY  H18  SING  N  N  54  
B9C  CAX  H19  SING  N  N  55  
B9C  CAX  H20  SING  N  N  56  
B9C  CAU  H21  SING  N  N  57  
B9C  CAT  H22  SING  N  N  58  
B9C  CAS  H23  SING  N  N  59  
B9C  CAR  H24  SING  N  N  60  
B9C  NAP  H25  SING  N  N  61  
B9C  CAN  H26  SING  N  N  62  
B9C  CAN  H27  SING  N  N  63  
B9C  CAN  H28  SING  N  N  64  
B9C  NBB  H6   SING  N  N  65  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
B9C  SMILES            ACDLabs               12.01  "C1N(CCNC1)c2ncc(cc2)c3nnc4c3cc(cc4)NCc5ccccc5NS(C)(=O)=O"  
B9C  InChI             InChI                 1.03   "InChI=1S/C24H27N7O2S/c1-34(32,33)30-21-5-3-2-4-17(21)15-26-19-7-8-22-20(14-19)24(29-28-22)18-6-9-23(27-16-18)31-12-10-25-11-13-31/h2-9,14,16,25-26,30H,10-13,15H2,1H3,(H,28,29)"  
B9C  InChIKey          InChI                 1.03   ZTJQDVXGJTWIGK-UHFFFAOYSA-N  
B9C  SMILES_CANONICAL  CACTVS                3.385  "C[S](=O)(=O)Nc1ccccc1CNc2ccc3[nH]nc(c4ccc(nc4)N5CCNCC5)c3c2"  
B9C  SMILES            CACTVS                3.385  "C[S](=O)(=O)Nc1ccccc1CNc2ccc3[nH]nc(c4ccc(nc4)N5CCNCC5)c3c2"  
B9C  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CS(=O)(=O)Nc1ccccc1CNc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CCNCC5"  
B9C  SMILES            "OpenEye OEToolkits"  2.0.6  "CS(=O)(=O)Nc1ccccc1CNc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CCNCC5"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
B9C  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{2-[({3-[6-(piperazin-1-yl)pyridin-3-yl]-1H-indazol-5-yl}amino)methyl]phenyl}methanesulfonamide"  
B9C  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "~{N}-[2-[[[3-(6-piperazin-1-ylpyridin-3-yl)-1~{H}-indazol-5-yl]amino]methyl]phenyl]methanesulfonamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
B9C  "Create component"  2019-01-25  PDBJ  
B9C  "Initial release"   2019-07-17  RCSB  
##
