data_9YC
# 
_chem_comp.id                                    9YC 
_chem_comp.name                                  "(2~{E})-3-cyano-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylimino]propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H14 N3 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-19 
_chem_comp.pdbx_modified_date                    2023-03-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        343.229 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9YC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7XET 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9YC OAU O1  O 0 1 N N N 32.109 -36.504 -37.780 -5.217 0.797  0.539  OAU 9YC 1  
9YC PAT P1  P 0 1 N N N 31.995 -35.035 -38.260 -3.719 1.259  0.171  PAT 9YC 2  
9YC OAV O2  O 0 1 N N N 32.933 -34.710 -39.469 -3.714 1.903  -1.161 OAV 9YC 3  
9YC OAW O3  O 0 1 N N N 30.604 -34.646 -38.629 -3.194 2.306  1.275  OAW 9YC 4  
9YC OAS O4  O 0 1 N N N 32.450 -34.137 -36.977 -2.751 -0.028 0.149  OAS 9YC 5  
9YC CAR C1  C 0 1 N N N 32.901 -32.783 -37.282 -1.379 0.037  -0.247 CAR 9YC 6  
9YC CAA C2  C 0 1 Y N N 33.564 -32.367 -36.120 -0.764 -1.336 -0.154 CAA 9YC 7  
9YC CAB C3  C 0 1 Y N N 32.925 -31.486 -35.253 -1.523 -2.415 0.260  CAB 9YC 8  
9YC NAC N1  N 0 1 Y N N 33.507 -31.064 -34.066 -0.995 -3.620 0.345  NAC 9YC 9  
9YC CAD C4  C 0 1 Y N N 34.736 -31.469 -33.683 0.268  -3.848 0.042  CAD 9YC 10 
9YC CAG C5  C 0 1 N N N 35.258 -30.980 -32.428 0.822  -5.245 0.156  CAG 9YC 11 
9YC CAE C6  C 0 1 Y N N 35.408 -32.384 -34.534 1.092  -2.816 -0.381 CAE 9YC 12 
9YC OAH O5  O 0 1 N N N 36.630 -32.879 -34.142 2.393  -3.055 -0.693 OAH 9YC 13 
9YC CAF C7  C 0 1 Y N N 34.828 -32.851 -35.766 0.566  -1.532 -0.488 CAF 9YC 14 
9YC CAI C8  C 0 1 N N N 35.490 -33.722 -36.659 1.423  -0.382 -0.950 CAI 9YC 15 
9YC NAJ N2  N 0 1 N N N 36.934 -33.327 -36.761 2.067  0.243  0.209  NAJ 9YC 16 
9YC CAK C9  C 0 1 N N N 37.772 -33.680 -37.745 2.912  1.190  0.038  CAK 9YC 17 
9YC CAL C10 C 0 1 N N N 39.238 -33.289 -37.644 3.655  1.738  1.198  CAL 9YC 18 
9YC OAO O6  O 0 1 N N N 40.090 -33.612 -38.493 4.456  2.635  1.036  OAO 9YC 19 
9YC OAN O7  O 0 1 N N N 39.587 -32.648 -36.661 3.442  1.240  2.431  OAN 9YC 20 
9YC CAM C11 C 0 1 N N N 37.230 -34.471 -38.916 3.151  1.747  -1.342 CAM 9YC 21 
9YC CAP C12 C 0 1 N N N 38.062 -34.514 -40.070 2.143  2.780  -1.635 CAP 9YC 22 
9YC NAQ N3  N 0 1 N N N 38.711 -34.658 -40.978 1.365  3.576  -1.861 NAQ 9YC 23 
9YC H1  H1  H 0 1 N N N 32.744 -36.964 -38.316 -5.855 1.523  0.570  H1  9YC 24 
9YC H2  H2  H 0 1 N N N 30.597 -34.290 -39.510 -3.170 1.951  2.174  H2  9YC 25 
9YC H3  H3  H 0 1 N N N 33.587 -32.786 -38.142 -1.314 0.396  -1.274 H3  9YC 26 
9YC H4  H4  H 0 1 N N N 32.045 -32.127 -37.498 -0.843 0.720  0.411  H4  9YC 27 
9YC H5  H5  H 0 1 N N N 31.943 -31.118 -35.513 -2.561 -2.269 0.517  H5  9YC 28 
9YC H6  H6  H 0 1 N N N 34.520 -30.313 -31.958 0.688  -5.768 -0.791 H6  9YC 29 
9YC H7  H7  H 0 1 N N N 35.462 -31.830 -31.760 1.884  -5.196 0.397  H7  9YC 30 
9YC H8  H8  H 0 1 N N N 36.190 -30.425 -32.610 0.295  -5.782 0.945  H8  9YC 31 
9YC H9  H9  H 0 1 N N N 36.883 -32.482 -33.317 2.539  -3.285 -1.621 H9  9YC 32 
9YC H10 H10 H 0 1 N N N 35.020 -33.656 -37.652 2.187  -0.751 -1.634 H10 9YC 33 
9YC H11 H11 H 0 1 N N N 35.417 -34.754 -36.286 0.801  0.353  -1.460 H11 9YC 34 
9YC H12 H12 H 0 1 N N N 40.522 -32.486 -36.704 3.950  1.629  3.155  H12 9YC 35 
9YC H13 H13 H 0 1 N N N 36.268 -34.025 -39.209 4.146  2.188  -1.388 H13 9YC 36 
9YC H14 H14 H 0 1 N N N 37.067 -35.505 -38.579 3.073  0.945  -2.076 H14 9YC 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9YC NAQ CAP TRIP N N 1  
9YC CAP CAM SING N N 2  
9YC OAV PAT DOUB N N 3  
9YC CAM CAK SING N N 4  
9YC OAW PAT SING N N 5  
9YC OAO CAL DOUB N N 6  
9YC PAT OAU SING N N 7  
9YC PAT OAS SING N N 8  
9YC CAK CAL SING N N 9  
9YC CAK NAJ DOUB N N 10 
9YC CAL OAN SING N N 11 
9YC CAR OAS SING N N 12 
9YC CAR CAA SING N N 13 
9YC NAJ CAI SING N N 14 
9YC CAI CAF SING N N 15 
9YC CAA CAF DOUB Y N 16 
9YC CAA CAB SING Y N 17 
9YC CAF CAE SING Y N 18 
9YC CAB NAC DOUB Y N 19 
9YC CAE OAH SING N N 20 
9YC CAE CAD DOUB Y N 21 
9YC NAC CAD SING Y N 22 
9YC CAD CAG SING N N 23 
9YC OAU H1  SING N N 24 
9YC OAW H2  SING N N 25 
9YC CAR H3  SING N N 26 
9YC CAR H4  SING N N 27 
9YC CAB H5  SING N N 28 
9YC CAG H6  SING N N 29 
9YC CAG H7  SING N N 30 
9YC CAG H8  SING N N 31 
9YC OAH H9  SING N N 32 
9YC CAI H10 SING N N 33 
9YC CAI H11 SING N N 34 
9YC OAN H12 SING N N 35 
9YC CAM H13 SING N N 36 
9YC CAM H14 SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9YC InChI            InChI                1.03  "InChI=1S/C12H14N3O7P/c1-7-11(16)9(5-15-10(2-3-13)12(17)18)8(4-14-7)6-22-23(19,20)21/h4,16H,2,5-6H2,1H3,(H,17,18)(H2,19,20,21)/b15-10+" 
9YC InChIKey         InChI                1.03  RXBCHSOWMGDFEL-XNTDXEJSSA-N                                                                                                             
9YC SMILES_CANONICAL CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(CN=C(CC#N)C(O)=O)c1O"                                                                                           
9YC SMILES           CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(CN=C(CC#N)C(O)=O)c1O"                                                                                           
9YC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)C/N=C(\CC#N)/C(=O)O)O"                                                                                        
9YC SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(cn1)COP(=O)(O)O)CN=C(CC#N)C(=O)O)O"                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           9YC 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{E})-3-cyano-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylimino]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9YC "Create component" 2022-04-19 PDBJ 
9YC "Initial release"  2023-04-05 RCSB 
# 
