data_0C
# 
_chem_comp.id                                    0C 
_chem_comp.name                                  "L-CYTIDINE-5'-MONOPHOSPHATE" 
_chem_comp.type                                  "L-RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C9 H14 N3 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-07-16 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        323.197 
_chem_comp.one_letter_code                       C 
_chem_comp.three_letter_code                     0C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1R3O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0C OP3    O3P    O 0 1 N Y N 0.061  23.394 92.849 4.885  1.674  -1.323 OP3    0C 1  
0C P      P      P 0 1 N N N -0.634 23.016 91.476 4.322  0.867  -0.049 P      0C 2  
0C OP1    O1P    O 0 1 N N N -0.010 23.814 90.382 5.302  -0.166 0.353  OP1    0C 3  
0C OP2    O2P    O 0 1 N N N -0.651 21.525 91.403 4.088  1.889  1.173  OP2    0C 4  
0C "O5'"  "O5'"  O 0 1 N N N -2.194 23.431 91.568 2.927  0.162  -0.435 "O5'"  0C 5  
0C "C5'"  "C5'"  C 0 1 N N N -2.568 24.819 91.480 2.227  -0.714 0.451  "C5'"  0C 6  
0C "C4'"  "C4'"  C 0 1 N N S -4.028 25.033 91.855 0.945  -1.205 -0.225 "C4'"  0C 7  
0C "O4'"  "O4'"  O 0 1 N N N -4.333 24.562 93.188 0.026  -0.108 -0.418 "O4'"  0C 8  
0C "C3'"  "C3'"  C 0 1 N N R -5.065 24.350 90.978 0.195  -2.191 0.698  "C3'"  0C 9  
0C "O3'"  "O3'"  O 0 1 N N N -5.149 24.964 89.720 0.479  -3.541 0.325  "O3'"  0C 10 
0C "C2'"  "C2'"  C 0 1 N N S -6.287 24.554 91.866 -1.297 -1.866 0.460  "C2'"  0C 11 
0C "O2'"  "O2'"  O 0 1 N N N -6.758 25.877 91.854 -1.980 -3.005 -0.067 "O2'"  0C 12 
0C "C1'"  "C1'"  C 0 1 N N S -5.700 24.165 93.206 -1.271 -0.722 -0.578 "C1'"  0C 13 
0C N1     N1     N 0 1 N N N -5.797 22.697 93.417 -2.332 0.247  -0.296 N1     0C 14 
0C C2     C2     C 0 1 N N N -7.045 22.119 93.769 -3.621 -0.134 -0.360 C2     0C 15 
0C O2     O2     O 0 1 N N N -8.051 22.845 93.900 -3.892 -1.287 -0.653 O2     0C 16 
0C N3     N3     N 0 1 N N N -7.104 20.762 93.941 -4.606 0.726  -0.107 N3     0C 17 
0C C4     C4     C 0 1 N N N -6.001 19.997 93.804 -4.340 1.986  0.214  C4     0C 18 
0C N4     N4     N 0 1 N N N -6.095 18.658 93.990 -5.365 2.865  0.473  N4     0C 19 
0C C5     C5     C 0 1 N N N -4.741 20.565 93.453 -2.999 2.417  0.289  C5     0C 20 
0C C6     C6     C 0 1 N N N -4.687 21.894 93.267 -2.009 1.529  0.036  C6     0C 21 
0C HOP3   HOP3   H 0 0 N N N 0.731  24.050 92.695 5.726  2.125  -1.163 HOP3   0C 22 
0C HOP2   HOP2   H 0 0 N N N -0.227 21.242 90.602 3.455  2.595  0.979  HOP2   0C 23 
0C "H5'"  "H5'1" H 0 1 N N N -1.937 25.399 92.169 2.860  -1.567 0.694  "H5'"  0C 24 
0C "H5''" "H5'2" H 0 0 N N N -2.415 25.161 90.446 1.973  -0.178 1.366  "H5''" 0C 25 
0C "H4'"  "H4'"  H 0 1 N N N -4.107 26.124 91.738 1.178  -1.678 -1.179 "H4'"  0C 26 
0C "H3'"  "H3'"  H 0 1 N N N -4.880 23.300 90.708 0.464  -2.019 1.740  "H3'"  0C 27 
0C "HO3'" H3T    H 0 0 N Y N -5.802 24.519 89.193 0.033  -4.202 0.872  "HO3'" 0C 28 
0C "H2'"  "H2'"  H 0 1 N N N -7.175 23.981 91.560 -1.768 -1.534 1.385  "H2'"  0C 29 
0C "HO2'" "HO'2" H 0 0 N N N -7.517 25.949 92.421 -1.974 -3.774 0.520  "HO2'" 0C 30 
0C "H1'"  "H1'"  H 0 1 N N N -6.249 24.654 94.024 -1.380 -1.122 -1.586 "H1'"  0C 31 
0C H41    H41    H 0 1 N N N -6.975 18.247 94.226 -6.286 2.566  0.421  H41    0C 32 
0C H42    H42    H 0 1 N N N -5.284 18.081 93.891 -5.167 3.785  0.708  H42    0C 33 
0C H5     H5     H 0 1 N N N -3.861 19.948 93.341 -2.766 3.439  0.549  H5     0C 34 
0C H6     H6     H 0 1 N N N -3.746 22.347 92.992 -0.975 1.834  0.092  H6     0C 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0C OP3   P      SING N N 1  
0C OP3   HOP3   SING N N 2  
0C P     OP1    DOUB N N 3  
0C P     OP2    SING N N 4  
0C P     "O5'"  SING N N 5  
0C OP2   HOP2   SING N N 6  
0C "O5'" "C5'"  SING N N 7  
0C "C5'" "C4'"  SING N N 8  
0C "C5'" "H5'"  SING N N 9  
0C "C5'" "H5''" SING N N 10 
0C "C4'" "O4'"  SING N N 11 
0C "C4'" "C3'"  SING N N 12 
0C "C4'" "H4'"  SING N N 13 
0C "O4'" "C1'"  SING N N 14 
0C "C3'" "O3'"  SING N N 15 
0C "C3'" "C2'"  SING N N 16 
0C "C3'" "H3'"  SING N N 17 
0C "O3'" "HO3'" SING N N 18 
0C "C2'" "O2'"  SING N N 19 
0C "C2'" "C1'"  SING N N 20 
0C "C2'" "H2'"  SING N N 21 
0C "O2'" "HO2'" SING N N 22 
0C "C1'" N1     SING N N 23 
0C "C1'" "H1'"  SING N N 24 
0C N1    C2     SING N N 25 
0C N1    C6     SING N N 26 
0C C2    O2     DOUB N N 27 
0C C2    N3     SING N N 28 
0C N3    C4     DOUB N N 29 
0C C4    N4     SING N N 30 
0C C4    C5     SING N N 31 
0C N4    H41    SING N N 32 
0C N4    H42    SING N N 33 
0C C5    C6     DOUB N N 34 
0C C5    H5     SING N N 35 
0C C6    H6     SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0C SMILES           ACDLabs              11.02 "O=P(O)(O)OCC2OC(N1C(=O)N=C(N)C=C1)C(O)C2O"                                                                                                          
0C SMILES_CANONICAL CACTVS               3.352 "NC1=NC(=O)N(C=C1)[C@H]2O[C@@H](CO[P](O)(O)=O)[C@H](O)[C@@H]2O"                                                                                      
0C SMILES           CACTVS               3.352 "NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O"                                                                                            
0C SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C1=CN(C(=O)N=C1N)[C@@H]2[C@H]([C@H]([C@@H](O2)COP(=O)(O)O)O)O"                                                                                      
0C SMILES           "OpenEye OEToolkits" 1.7.0 "C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)O)O)O"                                                                                                        
0C InChI            InChI                1.03  "InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m0/s1" 
0C InChIKey         InChI                1.03  IERHLVCPSMICTF-PSQAKQOGSA-N                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0C "SYSTEMATIC NAME" ACDLabs              11.02 "4-amino-1-(5-O-phosphono-beta-L-ribofuranosyl)pyrimidin-2(1H)-one"                                      
0C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[(2S,3R,4S,5S)-5-(4-azanyl-2-oxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0C "Create component"  2009-07-16 RCSB 
0C "Modify descriptor" 2011-06-04 RCSB 
# 
