data_09C
#

_chem_comp.id                                   09C
_chem_comp.name                                 "(3S,5R)-3,5-bis(6-bromo-1H-indol-3-yl)piperazin-2-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H16 Br2 N4 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "cis-3,4-dihydrohamacanthin B"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-07-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       488.175
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    09C
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3T07
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
09C  C1    C1    C   0  1  N  N  N   9.942   0.712  -1.393   1.079   1.842  -1.120  C1    09C   1  
09C  N1    N1    N   0  1  N  N  N  11.304  -1.119  -2.074  -0.047  -0.259  -0.629  N1    09C   2  
09C  O1    O1    O   0  1  N  N  N   9.735   1.711  -0.695   2.096   2.490  -1.244  O1    09C   3  
09C  C2    C2    C   0  1  N  N  S  11.053  -0.212  -0.977   1.130   0.567  -0.327  C2    09C   4  
09C  N2    N2    N   0  1  N  N  N   9.125   0.388  -2.532  -0.042   2.294  -1.691  N2    09C   5  
09C  N3    N3    N   0  1  Y  N  N  13.702  -2.557  -4.402  -3.787  -2.092  -1.020  N3    09C   6  
09C  N4    N4    N   0  1  Y  N  N  14.604   0.569  -1.524   3.776  -1.629  -1.645  N4    09C   7  
09C  BR1   BR1   BR  0  0  N  N  N  13.501  -5.943  -8.247  -8.369  -0.066   0.945  BR1   09C   8  
09C  BR2   BR2   BR  0  0  N  N  N  16.442   4.142   1.691   8.217  -0.226   1.050  BR2   09C   9  
09C  C3    C3    C   0  1  Y  N  N  11.228  -4.648  -6.810  -5.753   1.048   0.802  C3    09C  10  
09C  C4    C4    C   0  1  Y  N  N  13.714   3.052   1.539   5.555   0.772   1.204  C4    09C  11  
09C  C5    C5    C   0  1  Y  N  N  10.719  -3.770  -5.823  -4.422   1.068   0.491  C5    09C  12  
09C  C6    C6    C   0  1  Y  N  N  12.732   2.206   0.993   4.231   0.845   0.875  C6    09C  13  
09C  C7    C7    C   0  1  Y  N  N  12.867  -1.878  -3.649  -2.519  -1.586  -1.108  C7    09C  14  
09C  C8    C8    C   0  1  Y  N  N  13.439  -0.031  -1.716   2.486  -1.174  -1.596  C8    09C  15  
09C  C9    C9    C   0  1  Y  N  N  13.477  -4.128  -6.186  -5.973  -1.167  -0.106  C9    09C  16  
09C  C10   C10   C   0  1  Y  N  N  15.392   2.238   0.010   5.896  -0.996  -0.390  C10   09C  17  
09C  C11   C11   C   0  1  N  N  N   9.289  -0.833  -3.410  -1.311   1.575  -1.628  C11   09C  18  
09C  C12   C12   C   0  1  N  N  R  10.663  -1.435  -3.181  -1.276   0.549  -0.494  C12   09C  19  
09C  C13   C13   C   0  1  Y  N  N  12.615  -4.821  -6.989  -6.530  -0.064   0.505  C13   09C  20  
09C  C14   C14   C   0  1  Y  N  N  15.032   3.059   1.046   6.389  -0.145   0.576  C14   09C  21  
09C  C15   C15   C   0  1  Y  N  N  11.598  -2.140  -3.943  -2.483  -0.350  -0.588  C15   09C  22  
09C  C16   C16   C   0  1  Y  N  N  12.486   0.423  -0.888   2.380  -0.195  -0.684  C16   09C  23  
09C  C17   C17   C   0  1  Y  N  N  12.989  -3.280  -5.231  -4.620  -1.168  -0.430  C17   09C  24  
09C  C18   C18   C   0  1  Y  N  N  14.443   1.414  -0.527   4.551  -0.935  -0.743  C18   09C  25  
09C  C19   C19   C   0  1  Y  N  N  11.618  -3.066  -5.009  -3.838  -0.038  -0.128  C19   09C  26  
09C  C20   C20   C   0  1  Y  N  N  13.108   1.375  -0.062   3.711  -0.007  -0.101  C20   09C  27  
09C  HA    HA    H   0  1  N  N  N  10.709  -0.600  -0.007   1.143   0.803   0.737  HA    09C  28  
09C  HAD   HAD   H   0  1  N  N  N  10.540  -5.196  -7.438  -6.204   1.904   1.282  HAD   09C  29  
09C  HAE   HAE   H   0  1  N  N  N  13.451   3.710   2.354   5.957   1.431   1.959  HAE   09C  30  
09C  HAF   HAF   H   0  1  N  N  N   9.654  -3.644  -5.699  -3.825   1.937   0.724  HAF   09C  31  
09C  HAG   HAG   H   0  1  N  N  N  11.723   2.200   1.377   3.589   1.559   1.370  HAG   09C  32  
09C  HAH   HAH   H   0  1  N  N  N  13.176  -1.186  -2.879  -1.673  -2.105  -1.533  HAH   09C  33  
09C  HAI   HAI   H   0  1  N  N  N  13.275  -0.800  -2.456   1.674  -1.548  -2.201  HAI   09C  34  
09C  HAJ   HAJ   H   0  1  N  N  N  14.543  -4.250  -6.306  -6.585  -2.028  -0.332  HAJ   09C  35  
09C  HAK   HAK   H   0  1  N  N  N  16.402   2.242  -0.373   6.551  -1.705  -0.873  HAK   09C  36  
09C  H1AL  H1AL  H   0  0  N  N  N   9.186  -0.543  -4.466  -2.118   2.286  -1.447  H1AL  09C  37  
09C  H2AL  H2AL  H   0  0  N  N  N   8.516  -1.574  -3.157  -1.487   1.064  -2.574  H2AL  09C  38  
09C  H12   H12   H   0  1  N  N  N  12.171  -0.771  -2.432   0.025  -0.670  -1.548  H12   09C  39  
09C  H13   H13   H   0  1  N  N  N   8.387   1.023  -2.762  -0.011   3.138  -2.169  H13   09C  40  
09C  H14   H14   H   0  1  N  N  N  14.700  -2.528  -4.352  -4.060  -2.970  -1.329  H14   09C  41  
09C  H15   H15   H   0  1  N  N  N  15.447   0.410  -2.039   4.096  -2.337  -2.226  H15   09C  42  
09C  H16   H16   H   0  1  N  N  N   9.796  -1.892  -3.679  -1.275   1.064   0.466  H16   09C  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
09C  C1   C2    SING  N  N   1  
09C  C1   O1    DOUB  N  N   2  
09C  N1   C2    SING  N  N   3  
09C  C2   C16   SING  N  N   4  
09C  C2   HA    SING  N  N   5  
09C  N2   C1    SING  N  N   6  
09C  N3   C7    SING  Y  N   7  
09C  N4   C18   SING  Y  N   8  
09C  BR1  C13   SING  N  N   9  
09C  C3   C5    SING  Y  N  10  
09C  C3   HAD   SING  N  N  11  
09C  C4   HAE   SING  N  N  12  
09C  C5   C19   DOUB  Y  N  13  
09C  C5   HAF   SING  N  N  14  
09C  C6   C4    DOUB  Y  N  15  
09C  C6   HAG   SING  N  N  16  
09C  C7   HAH   SING  N  N  17  
09C  C8   N4    SING  Y  N  18  
09C  C8   C16   DOUB  Y  N  19  
09C  C8   HAI   SING  N  N  20  
09C  C9   C17   DOUB  Y  N  21  
09C  C9   HAJ   SING  N  N  22  
09C  C10  C14   DOUB  Y  N  23  
09C  C10  HAK   SING  N  N  24  
09C  C11  C12   SING  N  N  25  
09C  C11  N2    SING  N  N  26  
09C  C11  H1AL  SING  N  N  27  
09C  C11  H2AL  SING  N  N  28  
09C  C12  N1    SING  N  N  29  
09C  C13  C3    DOUB  Y  N  30  
09C  C13  C9    SING  Y  N  31  
09C  C14  C4    SING  Y  N  32  
09C  C14  BR2   SING  N  N  33  
09C  C15  C7    DOUB  Y  N  34  
09C  C15  C12   SING  N  N  35  
09C  C16  C20   SING  Y  N  36  
09C  C17  C19   SING  Y  N  37  
09C  C17  N3    SING  Y  N  38  
09C  C18  C20   DOUB  Y  N  39  
09C  C18  C10   SING  Y  N  40  
09C  C19  C15   SING  Y  N  41  
09C  C20  C6    SING  Y  N  42  
09C  N1   H12   SING  N  N  43  
09C  N2   H13   SING  N  N  44  
09C  N3   H14   SING  N  N  45  
09C  N4   H15   SING  N  N  46  
09C  C12  H16   SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
09C  SMILES            ACDLabs               12.01  "Brc1cc2c(cc1)c(cn2)C5C(=O)NCC(c3cnc4cc(Br)ccc34)N5"  
09C  InChI             InChI                 1.03   "InChI=1S/C20H16Br2N4O/c21-10-1-3-12-14(7-23-16(12)5-10)18-9-25-20(27)19(26-18)15-8-24-17-6-11(22)2-4-13(15)17/h1-8,18-19,23-24,26H,9H2,(H,25,27)/t18-,19-/m0/s1"  
09C  InChIKey          InChI                 1.03   OXVVLWOQGFZGEO-OALUTQOASA-N  
09C  SMILES_CANONICAL  CACTVS                3.370  "Brc1ccc2c([nH]cc2[C@@H]3CNC(=O)[C@@H](N3)c4c[nH]c5cc(Br)ccc45)c1"  
09C  SMILES            CACTVS                3.370  "Brc1ccc2c([nH]cc2[CH]3CNC(=O)[CH](N3)c4c[nH]c5cc(Br)ccc45)c1"  
09C  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "c1cc2c(cc1Br)[nH]cc2[C@H]3C(=O)NCC(N3)c4c[nH]c5c4ccc(c5)Br"  
09C  SMILES            "OpenEye OEToolkits"  1.7.2  "c1cc2c(cc1Br)[nH]cc2C3CNC(=O)C(N3)c4c[nH]c5c4ccc(c5)Br"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
09C  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3S,5R)-3,5-bis(6-bromo-1H-indol-3-yl)piperazin-2-one"  
09C  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "(3S)-3,5-bis(6-bromanyl-1H-indol-3-yl)piperazin-2-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
09C  "Create component"  2011-07-26  RCSB  
09C  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     09C
_pdbx_chem_comp_synonyms.name        "cis-3,4-dihydrohamacanthin B"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
