data_04C
# 
_chem_comp.id                                    04C 
_chem_comp.name                                  "1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H44 N4 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-12-29 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        584.704 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     04C 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3UN4 
_chem_comp.pdbx_subcomponent_list                "00E ALA 0A1 04B" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
04C C29 C29 C 0 1 N N N N N N 59.592 -135.510 33.957 -4.646  -1.028 -0.399 C    00E 1  
04C O37 O37 O 0 1 N N N N N N 59.685 -136.716 34.185 -4.749  -1.934 0.401  O    00E 2  
04C C30 C30 C 0 1 N N N N N N 58.319 -135.001 33.321 -5.883  -0.390 -0.977 CA   00E 3  
04C N31 N31 N 0 1 N N N N N N 57.150 -135.071 34.234 -7.076  -1.038 -0.418 NB   00E 4  
04C O34 O34 O 0 1 N N N N N N 54.395 -134.381 34.722 -9.564  -2.337 -0.538 OZ   00E 5  
04C C36 C36 C 0 1 N N N N N N 56.045 -135.873 33.626 -7.172  -2.437 -0.861 CD1  00E 6  
04C C32 C32 C 0 1 N N N N N N 56.763 -133.725 34.744 -8.294  -0.295 -0.772 CD2  00E 7  
04C C35 C35 C 0 1 N N N N N N 54.694 -135.753 34.387 -8.394  -3.091 -0.209 CE1  00E 8  
04C C33 C33 C 0 1 N N N N N N 55.427 -133.783 35.529 -9.504  -0.970 -0.120 CE2  00E 9  
04C N28 N28 N 0 1 N N N N N N 60.544 -134.582 34.272 -3.426  -0.588 -0.765 N    ALA 10 
04C C27 C27 C 0 1 N N S N N N 61.599 -134.825 35.272 -2.224  -1.204 -0.198 CA   ALA 11 
04C C26 C26 C 0 1 N N N N N N 61.032 -134.908 36.680 -1.084  -0.220 -0.247 C    ALA 12 
04C O39 O39 O 0 1 N N N N N N 59.993 -134.311 36.962 -1.259  0.887  -0.709 O    ALA 13 
04C C38 C38 C 0 1 N N N N N N 62.710 -133.739 35.166 -1.858  -2.449 -1.009 CB   ALA 14 
04C N25 N25 N 0 1 N N N N N N 61.700 -135.720 37.543 0.129   -0.570 0.224  N    0A1 15 
04C C24 C24 C 0 1 N N S N N N 61.159 -136.179 38.828 1.237   0.387  0.177  CA   0A1 16 
04C C40 C40 C 0 1 N N N N N N 60.440 -137.542 38.640 1.182   1.292  1.410  CB   0A1 17 
04C C41 C41 C 0 1 Y N N N N N 58.909 -137.484 38.493 -0.070  2.129  1.363  CG   0A1 18 
04C C48 C48 C 0 1 Y N N N N N 58.300 -137.544 37.219 -0.053  3.362  0.737  CD1  0A1 19 
04C C47 C47 C 0 1 Y N N N N N 56.896 -137.506 37.108 -1.199  4.131  0.693  CE1  0A1 20 
04C C44 C44 C 0 1 Y N N N N N 56.093 -137.459 38.267 -2.369  3.666  1.276  CZ   0A1 21 
04C O45 O45 O 0 1 N N N N N N 54.692 -137.548 38.144 -3.498  4.421  1.233  OH   0A1 22 
04C C46 C46 C 0 1 N N N N N N 53.933 -136.342 37.919 -4.665  3.878  1.855  CM   0A1 23 
04C C43 C43 C 0 1 Y N N N N N 56.697 -137.353 39.534 -2.383  2.428  1.903  CE2  0A1 24 
04C C42 C42 C 0 1 Y N N N N N 58.104 -137.374 39.646 -1.235  1.661  1.940  CD2  0A1 25 
04C C23 C23 C 0 1 N N N N N N 62.278 -136.388 39.828 2.546   -0.360 0.161  C    0A1 26 
04C O49 O49 O 0 1 N N N N N N 63.367 -136.840 39.468 2.552   -1.573 0.186  O    0A1 27 
04C N22 N22 N 0 1 N N N N N N 61.985 -136.092 41.117 3.709   0.319  0.118  N22  04B 28 
04C C8  C8  C 0 1 N N S N N N 63.051 -135.832 42.080 4.981   -0.407 0.102  C8   04B 29 
04C C9  C9  C 0 1 N N S N N N 63.010 -136.884 43.243 5.397   -0.739 1.536  C9   04B 30 
04C O21 O21 O 0 1 N N N N N N 61.630 -137.010 43.685 4.345   -1.457 2.183  O20  04B 31 
04C C10 C10 C 0 1 N N R N N N 63.571 -138.326 42.902 6.662   -1.599 1.514  C10  04B 32 
04C C11 C11 C 0 1 N N N N N N 64.868 -138.249 42.018 6.348   -2.953 0.874  C11  04B 33 
04C C12 C12 C 0 1 N N N N N N 62.544 -139.201 42.107 7.157   -1.815 2.946  C12  04B 34 
04C O13 O13 O 0 1 N N N N N N 63.066 -140.531 41.886 8.388   -2.541 2.920  O13  04B 35 
04C C7  C7  C 0 1 N N N N N N 62.841 -134.400 42.641 6.057   0.462  -0.553 C7   04B 36 
04C C6  C6  C 0 1 Y N N N N N 63.738 -133.304 42.112 5.696   0.706  -1.995 C6   04B 37 
04C C5  C5  C 0 1 Y N N N N N 64.559 -133.538 40.985 6.129   -0.170 -2.974 C5   04B 38 
04C C4  C4  C 0 1 Y N N N N N 65.282 -132.469 40.393 5.799   0.054  -4.297 C4   04B 39 
04C C3  C3  C 0 1 Y N N N N N 65.198 -131.170 40.947 5.036   1.153  -4.642 C3   04B 40 
04C C2  C2  C 0 1 Y N N N N N 64.431 -130.947 42.115 4.602   2.029  -3.664 C2   04B 41 
04C C1  C1  C 0 1 Y N N N N N 63.724 -132.018 42.711 4.928   1.802  -2.340 C1   04B 42 
04C H1  H1  H 0 1 N N N N N N 58.470 -133.953 33.023 -5.895  0.671  -0.728 HAA  00E 43 
04C H2  H2  H 0 1 N N N N N N 58.105 -135.608 32.429 -5.879  -0.508 -2.061 HAB  00E 44 
04C H4  H4  H 0 1 N N N N N N 55.893 -135.528 32.593 -7.278  -2.469 -1.946 HD1  00E 45 
04C H5  H5  H 0 1 N N N N N N 56.347 -136.931 33.619 -6.271  -2.975 -0.567 HD1A 00E 46 
04C H10 H10 H 0 1 N N N N N N 57.555 -133.353 35.411 -8.212  0.730  -0.412 HD2  00E 47 
04C H11 H11 H 0 1 N N N N N N 56.649 -133.038 33.892 -8.418  -0.293 -1.855 HD2A 00E 48 
04C H6  H6  H 0 1 N N N N N N 53.889 -136.149 33.751 -8.263  -3.107 0.873  HE1  00E 49 
04C H7  H7  H 0 1 N N N N N N 54.752 -136.343 35.314 -8.502  -4.110 -0.579 HE1A 00E 50 
04C H8  H8  H 0 1 N N N N N N 55.125 -132.762 35.806 -10.416 -0.456 -0.426 HE2  00E 51 
04C H9  H9  H 0 1 N N N N N N 55.568 -134.383 36.440 -9.406  -0.925 0.964  HE2A 00E 52 
04C H12 H12 H 0 1 N N N N N N 60.524 -133.699 33.803 -3.344  0.137  -1.405 H    ALA 53 
04C H13 H13 H 0 1 N N N N N N 62.069 -135.793 35.046 -2.415  -1.488 0.837  HA   ALA 54 
04C H14 H14 H 0 1 N N N N N N 63.488 -133.935 35.918 -1.667  -2.165 -2.044 HB1  ALA 55 
04C H15 H15 H 0 1 N N N N N N 63.156 -133.768 34.161 -0.964  -2.908 -0.587 HB2  ALA 56 
04C H16 H16 H 0 1 N N N N N N 62.270 -132.746 35.344 -2.682  -3.161 -0.974 HB3  ALA 57 
04C H17 H17 H 0 1 N N N N N N 62.618 -136.023 37.286 0.269   -1.456 0.595  HN1  0A1 58 
04C H18 H18 H 0 1 N N N N N N 60.442 -135.445 39.224 1.154   0.995  -0.724 HA   0A1 59 
04C H19 H19 H 0 1 N N N N N N 60.670 -138.167 39.515 1.176   0.679  2.311  HBC1 0A1 60 
04C H20 H20 H 0 1 N N N N N N 60.847 -138.015 37.734 2.055   1.944  1.421  HBC2 0A1 61 
04C H21 H21 H 0 1 N N N N N N 58.910 -137.619 36.331 0.858   3.724  0.283  HD1  0A1 62 
04C H27 H27 H 0 1 N N N N N N 58.566 -137.305 40.620 -1.248  0.695  2.425  HD2  0A1 63 
04C H22 H22 H 0 1 N N N N N N 56.433 -137.513 36.132 -1.185  5.095  0.205  HE1  0A1 64 
04C H26 H26 H 0 1 N N N N N N 56.085 -137.256 40.419 -3.292  2.064  2.358  HE2  0A1 65 
04C H23 H23 H 0 1 N N N N N N 52.863 -136.589 37.848 -4.925  2.934  1.377  HMC1 0A1 66 
04C H24 H24 H 0 1 N N N N N N 54.093 -135.646 38.756 -4.467  3.707  2.913  HMC2 0A1 67 
04C H25 H25 H 0 1 N N N N N N 54.263 -135.870 36.982 -5.492  4.580  1.749  HMC3 0A1 68 
04C H30 H30 H 0 1 N N N N N N 63.614 -136.485 44.071 5.595   0.184  2.080  H3   04B 69 
04C H28 H28 H 0 1 N N N N N N 61.030 -136.051 41.411 3.704   1.289  0.098  H28  04B 70 
04C H29 H29 H 0 1 N N N N N N 64.033 -135.885 41.587 4.865   -1.331 -0.466 H29  04B 71 
04C H33 H33 H 0 1 N N N N N N 65.627 -137.642 42.532 5.575   -3.458 1.453  H35  04B 72 
04C H34 H34 H 0 1 N N N N N N 65.260 -139.263 41.853 5.995   -2.799 -0.146 H36  04B 73 
04C H35 H35 H 0 1 N N N N N N 64.625 -137.788 41.049 7.249   -3.566 0.858  H37  04B 74 
04C H36 H36 H 0 1 N N N N N N 62.342 -138.727 41.135 7.315   -0.849 3.425  H38  04B 75 
04C H37 H37 H 0 1 N N N N N N 61.609 -139.271 42.682 6.413   -2.382 3.506  H39  04B 76 
04C H38 H38 H 0 1 N N N N N N 62.430 -141.045 41.403 8.761   -2.714 3.795  H40  04B 77 
04C H39 H39 H 0 1 N N N N N N 61.803 -134.110 42.423 6.122   1.416  -0.028 H45  04B 78 
04C H40 H40 H 0 1 N N N N N N 62.987 -134.448 43.730 7.018   -0.048 -0.500 H46  04B 79 
04C H41 H41 H 0 1 N N N N N N 64.636 -134.533 40.573 6.726   -1.028 -2.704 H47  04B 80 
04C H42 H42 H 0 1 N N N N N N 65.895 -132.647 39.522 6.138   -0.630 -5.061 H48  04B 81 
04C H43 H43 H 0 1 N N N N N N 65.719 -130.348 40.478 4.778   1.329  -5.677 H49  04B 82 
04C H44 H44 H 0 1 N N N N N N 64.385 -129.960 42.551 4.005   2.888  -3.934 H50  04B 83 
04C H45 H45 H 0 1 N N N N N N 63.172 -131.856 43.625 4.586   2.484  -1.576 H51  04B 84 
04C H31 H31 H 0 1 N N N N N N 61.580 -137.644 44.391 3.510   -0.971 2.233  H1   04B 85 
04C H32 H32 H 0 1 N N N N N N 63.817 -138.837 43.844 7.435   -1.094 0.935  H32  04B 86 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
04C C30 C29 SING N N 1  
04C C30 N31 SING N N 2  
04C C36 N31 SING N N 3  
04C C36 C35 SING N N 4  
04C C29 O37 DOUB N N 5  
04C C29 N28 SING N N 6  
04C N31 C32 SING N N 7  
04C N28 C27 SING N N 8  
04C C35 O34 SING N N 9  
04C O34 C33 SING N N 10 
04C C32 C33 SING N N 11 
04C C38 C27 SING N N 12 
04C C27 C26 SING N N 13 
04C C26 O39 DOUB N N 14 
04C C26 N25 SING N N 15 
04C C47 C48 DOUB Y N 16 
04C C47 C44 SING Y N 17 
04C C48 C41 SING Y N 18 
04C N25 C24 SING N N 19 
04C C46 O45 SING N N 20 
04C O45 C44 SING N N 21 
04C C44 C43 DOUB Y N 22 
04C C41 C40 SING N N 23 
04C C41 C42 DOUB Y N 24 
04C C40 C24 SING N N 25 
04C C24 C23 SING N N 26 
04C O49 C23 DOUB N N 27 
04C C43 C42 SING Y N 28 
04C C23 N22 SING N N 29 
04C C4  C3  DOUB Y N 30 
04C C4  C5  SING Y N 31 
04C C3  C2  SING Y N 32 
04C C5  C6  DOUB Y N 33 
04C N22 C8  SING N N 34 
04C O13 C12 SING N N 35 
04C C11 C10 SING N N 36 
04C C8  C7  SING N N 37 
04C C8  C9  SING N N 38 
04C C12 C10 SING N N 39 
04C C6  C7  SING N N 40 
04C C6  C1  SING Y N 41 
04C C2  C1  DOUB Y N 42 
04C C10 C9  SING N N 43 
04C C9  O21 SING N N 44 
04C C30 H1  SING N N 45 
04C C30 H2  SING N N 46 
04C C36 H4  SING N N 47 
04C C36 H5  SING N N 48 
04C C35 H6  SING N N 49 
04C C35 H7  SING N N 50 
04C C33 H8  SING N N 51 
04C C33 H9  SING N N 52 
04C C32 H10 SING N N 53 
04C C32 H11 SING N N 54 
04C N28 H12 SING N N 55 
04C C27 H13 SING N N 56 
04C C38 H14 SING N N 57 
04C C38 H15 SING N N 58 
04C C38 H16 SING N N 59 
04C N25 H17 SING N N 60 
04C C24 H18 SING N N 61 
04C C40 H19 SING N N 62 
04C C40 H20 SING N N 63 
04C C48 H21 SING N N 64 
04C C47 H22 SING N N 65 
04C C46 H23 SING N N 66 
04C C46 H24 SING N N 67 
04C C46 H25 SING N N 68 
04C C43 H26 SING N N 69 
04C C42 H27 SING N N 70 
04C N22 H28 SING N N 71 
04C C8  H29 SING N N 72 
04C C9  H30 SING N N 73 
04C O21 H31 SING N N 74 
04C C10 H32 SING N N 75 
04C C11 H33 SING N N 76 
04C C11 H34 SING N N 77 
04C C11 H35 SING N N 78 
04C C12 H36 SING N N 79 
04C C12 H37 SING N N 80 
04C O13 H38 SING N N 81 
04C C7  H39 SING N N 82 
04C C7  H40 SING N N 83 
04C C5  H41 SING N N 84 
04C C4  H42 SING N N 85 
04C C3  H43 SING N N 86 
04C C2  H44 SING N N 87 
04C C1  H45 SING N N 88 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
04C SMILES           ACDLabs              12.01 "O=C(NC(C(=O)NC(C(=O)NC(Cc1ccccc1)C(O)C(C)CO)Cc2ccc(OC)cc2)C)CN3CCOCC3"                                                                                                                                                                               
04C InChI            InChI                1.03  "InChI=1S/C31H44N4O7/c1-21(20-36)29(38)26(17-23-7-5-4-6-8-23)33-31(40)27(18-24-9-11-25(41-3)12-10-24)34-30(39)22(2)32-28(37)19-35-13-15-42-16-14-35/h4-12,21-22,26-27,29,36,38H,13-20H2,1-3H3,(H,32,37)(H,33,40)(H,34,39)/t21-,22+,26+,27+,29+/m1/s1" 
04C InChIKey         InChI                1.03  SLVOSRJOLWNALP-QAKIEGLASA-N                                                                                                                                                                                                                           
04C SMILES_CANONICAL CACTVS               3.370 "COc1ccc(C[C@H](NC(=O)[C@H](C)NC(=O)CN2CCOCC2)C(=O)N[C@@H](Cc3ccccc3)[C@@H](O)[C@H](C)CO)cc1"                                                                                                                                                         
04C SMILES           CACTVS               3.370 "COc1ccc(C[CH](NC(=O)[CH](C)NC(=O)CN2CCOCC2)C(=O)N[CH](Cc3ccccc3)[CH](O)[CH](C)CO)cc1"                                                                                                                                                                
04C SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H](CO)[C@@H]([C@H](Cc1ccccc1)NC(=O)[C@H](Cc2ccc(cc2)OC)NC(=O)[C@H](C)NC(=O)CN3CCOCC3)O"                                                                                                                                                          
04C SMILES           "OpenEye OEToolkits" 1.7.6 "CC(CO)C(C(Cc1ccccc1)NC(=O)C(Cc2ccc(cc2)OC)NC(=O)C(C)NC(=O)CN3CCOCC3)O"                                                                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
04C "SYSTEMATIC NAME" ACDLabs              12.01 "1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol"                                                    
04C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-3-(4-methoxyphenyl)-N-[(2S,3S,4R)-4-methyl-3,5-bis(oxidanyl)-1-phenyl-pentan-2-yl]-2-[[(2S)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
04C "Create component" 2011-12-29 RCSB 
04C "Modify PCM"       2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 04C THR None "Covalent chemical modification" "Amino-acid backbone"   N-terminal     C10 N   ? ? 
2 04C THR None "Covalent chemical modification" "Amino-acid side chain" "Any position" C9  OG1 ? ? 
# 
