data_YYB
#

_chem_comp.id                                   YYB
_chem_comp.name                                 "1,5-anhydro-3-O-methyl-2,6-di-O-sulfo-D-glucitol"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O11 S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       338.309
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YYB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1SR5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YYB  C1    C1    C  0  1  N  N  N  24.760  -3.000  65.894   0.832   1.028  -0.761  C1    YYB   1  
YYB  C2    C2    C  0  1  N  N  S  25.740  -3.042  64.698   1.790   0.045  -0.083  C2    YYB   2  
YYB  C3    C3    C  0  1  N  N  S  26.402  -1.679  64.510   1.266  -1.382  -0.275  C3    YYB   3  
YYB  C3M   C3M   C  0  1  N  N  N  28.818  -1.811  63.601   3.196  -2.800  -0.373  C3M   YYB   4  
YYB  C4    C4    C  0  1  N  N  R  25.323  -0.642  64.303  -0.155  -1.472   0.290  C4    YYB   5  
YYB  C5    C5    C  0  1  N  N  R  24.344  -0.646  65.541  -1.038  -0.431  -0.401  C5    YYB   6  
YYB  C6    C6    C  0  1  N  N  N  23.253   0.326  65.376  -2.444  -0.474   0.200  C6    YYB   7  
YYB  O1S2  O1S2  O  0  0  N  N  N  28.339  -5.133  63.299   4.484   0.360   1.331  O1S2  YYB   8  
YYB  O1S6  O1S6  O  0  0  N  N  N  21.623   1.203  62.386  -4.722   1.255   1.286  O1S6  YYB   9  
YYB  O2    O2    O  0  1  N  N  N  26.755  -4.114  64.885   3.087   0.160  -0.672  O2    YYB  10  
YYB  O2S2  O2S2  O  0  0  N  N  N  25.949  -5.170  62.802   3.237   2.188   0.520  O2S2  YYB  11  
YYB  O2S6  O2S6  O  0  0  N  N  N  21.098   1.891  64.629  -5.064  -0.882   0.350  O2S6  YYB  12  
YYB  O3    O3    O  0  1  N  N  N  27.350  -1.712  63.367   2.115  -2.300   0.417  O3    YYB  13  
YYB  O3S2  O3S2  O  0  0  N  N  N  26.811  -6.561  64.570   5.179   1.246  -0.740  O3S2  YYB  14  
YYB  O3S6  O3S6  O  0  0  N  N  N  20.174  -0.166  63.750  -5.475   1.215  -0.947  O3S6  YYB  15  
YYB  O4    O4    O  0  1  N  N  N  25.929   0.614  64.108  -0.681  -2.779   0.054  O4    YYB  16  
YYB  O5    O5    O  0  1  N  N  N  23.767  -1.951  65.708  -0.477   0.870  -0.211  O5    YYB  17  
YYB  O6    O6    O  0  1  N  N  N  22.575  -0.075  64.259  -3.299   0.415  -0.523  O6    YYB  18  
YYB  S2    S2    S  0  1  N  N  N  26.908  -5.299  63.875   4.027   1.093   0.078  S2    YYB  19  
YYB  S6    S6    S  0  1  N  N  N  21.297   0.761  63.733  -4.730   0.453  -0.007  S6    YYB  20  
YYB  H11   H11   H  0  1  N  N  N  24.249  -3.971  65.977   1.177   2.047  -0.591  H11   YYB  21  
YYB  H12   H12   H  0  1  N  N  N  25.325  -2.803  66.817   0.803   0.827  -1.832  H12   YYB  22  
YYB  H1S2  H1S2  H  0  0  N  N  N  28.288  -4.981  62.363   5.091   0.870   1.885  H1S2  YYB  23  
YYB  H1S6  H1S6  H  0  0  N  N  N  21.641   2.152  62.359  -5.592   1.340   1.701  H1S6  YYB  24  
YYB  H2    H2    H  0  1  N  N  N  25.157  -3.266  63.793   1.851   0.271   0.981  H2    YYB  25  
YYB  H3    H3    H  0  1  N  N  N  26.956  -1.432  65.427   1.252  -1.625  -1.337  H3    YYB  26  
YYB  H3M1  H3M1  H  0  0  N  N  N  29.344  -1.821  62.635   3.821  -1.969  -0.702  H3M1  YYB  27  
YYB  H3M2  H3M2  H  0  0  N  N  N  29.040  -2.738  64.149   3.793  -3.490   0.223  H3M2  YYB  28  
YYB  H3M3  H3M3  H  0  0  N  N  N  29.154  -0.946  64.192   2.799  -3.322  -1.244  H3M3  YYB  29  
YYB  H4    H4    H  0  1  N  N  N  24.738  -0.919  63.413  -0.133  -1.277   1.363  H4    YYB  30  
YYB  H4O   H4O   H  0  1  N  N  N  25.258   1.273  63.977  -1.579  -2.908   0.386  H4O   YYB  31  
YYB  H5    H5    H  0  1  N  N  N  24.930  -0.384  66.434  -1.092  -0.650  -1.468  H5    YYB  32  
YYB  H61   H61   H  0  1  N  N  N  23.658   1.339  65.237  -2.836  -1.488   0.135  H61   YYB  33  
YYB  H62   H62   H  0  1  N  N  N  22.590   0.313  66.254  -2.402  -0.167   1.245  H62   YYB  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YYB  C1    O5    SING  N  N   1  
YYB  C1    C2    SING  N  N   2  
YYB  C1    H12   SING  N  N   3  
YYB  C1    H11   SING  N  N   4  
YYB  C2    C3    SING  N  N   5  
YYB  C2    O2    SING  N  N   6  
YYB  C2    H2    SING  N  N   7  
YYB  C3    C4    SING  N  N   8  
YYB  C3    O3    SING  N  N   9  
YYB  C3    H3    SING  N  N  10  
YYB  C3M   O3    SING  N  N  11  
YYB  C3M   H3M1  SING  N  N  12  
YYB  C3M   H3M3  SING  N  N  13  
YYB  C3M   H3M2  SING  N  N  14  
YYB  C4    H4    SING  N  N  15  
YYB  C4    O4    SING  N  N  16  
YYB  C4    C5    SING  N  N  17  
YYB  C5    C6    SING  N  N  18  
YYB  C5    O5    SING  N  N  19  
YYB  C5    H5    SING  N  N  20  
YYB  C6    H62   SING  N  N  21  
YYB  C6    H61   SING  N  N  22  
YYB  C6    O6    SING  N  N  23  
YYB  O1S2  H1S2  SING  N  N  24  
YYB  O1S2  S2    SING  N  N  25  
YYB  O1S6  H1S6  SING  N  N  26  
YYB  O1S6  S6    SING  N  N  27  
YYB  O2    S2    SING  N  N  28  
YYB  O2S2  S2    DOUB  N  N  29  
YYB  O2S6  S6    DOUB  N  N  30  
YYB  O3S2  S2    DOUB  N  N  31  
YYB  O3S6  S6    DOUB  N  N  32  
YYB  O4    H4O   SING  N  N  33  
YYB  O6    S6    SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YYB  SMILES            ACDLabs               12.01  "O=S(=O)(O)OCC1OCC(OS(=O)(=O)O)C(OC)C1O"  
YYB  InChI             InChI                 1.03   "InChI=1S/C7H14O11S2/c1-15-7-5(18-20(12,13)14)2-16-4(6(7)8)3-17-19(9,10)11/h4-8H,2-3H2,1H3,(H,9,10,11)(H,12,13,14)/t4-,5+,6-,7-/m1/s1"  
YYB  InChIKey          InChI                 1.03   DOMPCHKEFBEVFB-XZBKPIIZSA-N  
YYB  SMILES_CANONICAL  CACTVS                3.370  "CO[C@H]1[C@H](O)[C@@H](CO[S](O)(=O)=O)OC[C@@H]1O[S](O)(=O)=O"  
YYB  SMILES            CACTVS                3.370  "CO[CH]1[CH](O)[CH](CO[S](O)(=O)=O)OC[CH]1O[S](O)(=O)=O"  
YYB  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CO[C@@H]1[C@H](CO[C@@H]([C@H]1O)COS(=O)(=O)O)OS(=O)(=O)O"  
YYB  SMILES            "OpenEye OEToolkits"  1.7.6  "COC1C(COC(C1O)COS(=O)(=O)O)OS(=O)(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YYB  "SYSTEMATIC NAME"  ACDLabs               12.01  "1,5-anhydro-3-O-methyl-2,6-di-O-sulfo-D-glucitol"  
YYB  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "[(3S,4S,5R,6R)-4-methoxy-5-oxidanyl-6-(sulfooxymethyl)oxan-3-yl] hydrogen sulfate"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
YYB  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
YYB  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
YYB  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YYB  "Create component"     2012-12-18  RCSB  
YYB  "Modify atom id"       2013-02-04  RCSB  
YYB  "Modify linking type"  2020-05-09  RCSB  
YYB  "Initial release"      2020-07-29  RCSB  
##
