data_TXB
#

_chem_comp.id                                   TXB
_chem_comp.name                                 4-deoxy-4-thio-alpha-D-xylopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C5 H10 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;(2S,3R,4R,5R)-5-sulfanyloxane-2,3,4-triol; THIOXYLOPYRANOSE; 4-deoxy-4-thio-alpha-D-xylose; 4-deoxy-4-thio-D-xylose;
4-deoxy-4-thio-xylose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-08-26
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       166.195
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    TXB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5AE6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  TXB  "(2S,3R,4R,5R)-5-sulfanyloxane-2,3,4-triol"  PDB  ?  
2  TXB  THIOXYLOPYRANOSE                             PDB  ?  
3  TXB  4-deoxy-4-thio-alpha-D-xylose                PDB  ?  
4  TXB  4-deoxy-4-thio-D-xylose                      PDB  ?  
5  TXB  4-deoxy-4-thio-xylose                        PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TXB  S4   S4    S  0  1  N  N  N  33.126  -84.046  -16.017   2.691  -0.101  -0.320  S4   TXB   1  
TXB  C4   C4    C  0  1  N  N  R  32.654  -84.569  -14.374   1.058  -0.223   0.461  C4   TXB   2  
TXB  C5   C5    C  0  1  N  N  N  33.894  -84.914  -13.574   0.465  -1.608   0.193  C5   TXB   3  
TXB  O5   O5    O  0  1  N  N  N  33.539  -85.261  -12.193  -0.845  -1.681   0.760  O5   TXB   4  
TXB  C1   C1    C  0  1  N  N  S  32.644  -86.399  -12.057  -1.770  -0.738   0.216  C1   TXB   5  
TXB  O1   O1    O  0  1  N  Y  N  33.324  -87.635  -12.379  -1.886  -0.944  -1.194  O1   TXB   6  
TXB  C2   C2    C  0  1  N  N  R  31.394  -86.228  -12.943  -1.266   0.682   0.484  C2   TXB   7  
TXB  O2   O2    O  0  1  N  N  N  30.647  -87.464  -12.951  -2.160   1.626  -0.109  O2   TXB   8  
TXB  C3   C3    C  0  1  N  N  R  31.765  -85.813  -14.393   0.129   0.845  -0.125  C3   TXB   9  
TXB  O3   O3    O  0  1  N  N  N  30.569  -85.532  -15.159   0.638   2.144   0.184  O3   TXB  10  
TXB  HS4  HS4   H  0  1  N  N  N  31.973  -83.792  -16.561   3.386  -1.085   0.277  HS4  TXB  11  
TXB  H4   H4    H  0  1  N  N  N  32.120  -83.728  -13.907   1.157  -0.070   1.536  H4   TXB  12  
TXB  H51  H51C  H  0  1  N  N  N  34.400  -85.771  -14.043   0.405  -1.776  -0.882  H51  TXB  13  
TXB  H52  H52C  H  0  1  N  N  N  34.572  -84.047  -13.566   1.100  -2.369   0.646  H52  TXB  14  
TXB  H3   H3    H  0  1  N  N  N  32.322  -86.639  -14.860   0.071   0.722  -1.207  H3   TXB  15  
TXB  H1   H1    H  0  1  N  N  N  32.302  -86.450  -11.013  -2.745  -0.873   0.684  H1   TXB  16  
TXB  HO1  HA    H  0  1  N  Y  N  32.721  -88.363  -12.283  -2.201  -1.825  -1.438  HO1  TXB  17  
TXB  H2   H2    H  0  1  N  N  N  30.774  -85.429  -12.509  -1.217   0.854   1.560  H2   TXB  18  
TXB  HO2  HB    H  0  1  N  Y  N  29.875  -87.364  -13.496  -3.065   1.577   0.227  HO2  TXB  19  
TXB  HO3  HC    H  0  1  N  Y  N  30.013  -86.302  -15.174   1.523   2.313  -0.167  HO3  TXB  20  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TXB  S4  C4   SING  N  N   1  
TXB  C4  C5   SING  N  N   2  
TXB  C4  C3   SING  N  N   3  
TXB  C5  O5   SING  N  N   4  
TXB  O5  C1   SING  N  N   5  
TXB  C1  O1   SING  N  N   6  
TXB  C1  C2   SING  N  N   7  
TXB  C2  O2   SING  N  N   8  
TXB  C2  C3   SING  N  N   9  
TXB  C3  O3   SING  N  N  10  
TXB  S4  HS4  SING  N  N  11  
TXB  C4  H4   SING  N  N  12  
TXB  C5  H51  SING  N  N  13  
TXB  C5  H52  SING  N  N  14  
TXB  C3  H3   SING  N  N  15  
TXB  C1  H1   SING  N  N  16  
TXB  O1  HO1  SING  N  N  17  
TXB  C2  H2   SING  N  N  18  
TXB  O2  HO2  SING  N  N  19  
TXB  O3  HO3  SING  N  N  20  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TXB  InChI             InChI                 1.03   "InChI=1S/C5H10O4S/c6-3-2(10)1-9-5(8)4(3)7/h2-8,10H,1H2/t2-,3+,4-,5+/m1/s1"  
TXB  InChIKey          InChI                 1.03   MFDZOCXKSSGEBR-LECHCGJUSA-N  
TXB  SMILES_CANONICAL  CACTVS                3.385  "O[C@H]1OC[C@@H](S)[C@H](O)[C@H]1O"  
TXB  SMILES            CACTVS                3.385  "O[CH]1OC[CH](S)[CH](O)[CH]1O"  
TXB  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)S"  
TXB  SMILES            "OpenEye OEToolkits"  1.7.6  "C1C(C(C(C(O1)O)O)O)S"  
#
_pdbx_chem_comp_identifier.comp_id          TXB
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  1.7.6
_pdbx_chem_comp_identifier.identifier       "(2S,3R,4R,5R)-5-sulfanyloxane-2,3,4-triol"
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
TXB  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
TXB  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
TXB  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
TXB  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TXB  "Create component"          2015-08-26  EBI   
TXB  "Initial release"           2016-09-21  RCSB  
TXB  "Other modification"        2020-07-03  RCSB  
TXB  "Modify name"               2020-07-17  RCSB  
TXB  "Modify synonyms"           2020-07-17  RCSB  
TXB  "Modify internal type"      2020-07-17  RCSB  
TXB  "Modify linking type"       2020-07-17  RCSB  
TXB  "Modify atom id"            2020-07-17  RCSB  
TXB  "Modify component atom id"  2020-07-17  RCSB  
TXB  "Modify leaving atom flag"  2020-07-17  RCSB  
##
