data_R4B
#

_chem_comp.id                                   R4B
_chem_comp.name                                 
;N-[(2S)-3-[(R)-(4-bromophenyl)(hydroxy)phosphoryl]-2-{[3-(3'-chlorobiphenyl-4-yl)-1,2-oxazol-5-yl]methyl}propanoyl]-L-a
lanyl-L-alaninamide
;

_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H31 Br Cl N4 O6 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        RXP470B
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-10-04
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       701.932
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R4B
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4GR0
_chem_comp.pdbx_subcomponent_list               "0YL ALA ALA NH2"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R4B  O4   O4   O   0  1  N  N  N   -9.601  26.045   -4.733  -0.508   1.600  -2.331  O4   0YL   1  
R4B  N1   N1   N   0  1  Y  N  N   -6.120  22.270   -5.868   2.755  -0.044  -2.474  N1   0YL   2  
R4B  O1   O1   O   0  1  Y  N  N   -7.227  22.558   -5.198   1.569  -0.013  -2.709  O1   0YL   3  
R4B  C25  C25  C   0  1  N  N  N   -8.642  26.365   -4.005  -1.088   1.357  -1.294  C25  0YL   4  
R4B  C17  C17  C   0  1  N  N  S   -8.198  25.457   -2.902  -1.261  -0.071  -0.845  C17  0YL   5  
R4B  C16  C16  C   0  1  N  N  N   -8.251  24.043   -3.452  -0.617  -1.010  -1.868  C16  0YL   6  
R4B  C14  C14  C   0  1  Y  N  N   -5.758  23.973   -4.425   1.774  -1.366  -1.037  C14  0YL   7  
R4B  C13  C13  C   0  1  Y  N  N   -5.190  23.135   -5.402   3.023  -0.838  -1.467  C13  0YL   8  
R4B  C12  C12  C   0  1  Y  N  N   -3.788  23.105   -5.885   4.360  -1.129  -0.893  C12  0YL   9  
R4B  C11  C11  C   0  1  Y  N  N   -3.443  22.252   -6.928   4.480  -2.009   0.183  C11  0YL  10  
R4B  C10  C10  C   0  1  Y  N  N   -2.119  22.203   -7.368   5.720  -2.279   0.717  C10  0YL  11  
R4B  C7   C7   C   0  1  Y  N  N   -1.165  23.002   -6.743   6.857  -1.673   0.182  C7   0YL  12  
R4B  C8   C8   C   0  1  Y  N  N   -1.521  23.826   -5.681   6.737  -0.794  -0.894  C8   0YL  13  
R4B  C9   C9   C   0  1  Y  N  N   -2.833  23.878   -5.241   5.496  -0.528  -1.431  C9   0YL  14  
R4B  C15  C15  C   0  1  Y  N  N   -7.093  23.579   -4.314   0.875  -0.799  -1.873  C15  0YL  15  
R4B  CL1  CL1  CL  0  0  N  N  N    3.199  20.470   -8.322  11.989  -0.882   0.102  CL1  0YL  16  
R4B  C1   C1   C   0  1  Y  N  N    2.314  21.938   -7.804  10.571  -1.633   0.764  C1   0YL  17  
R4B  C2   C2   C   0  1  Y  N  N    0.953  21.860   -7.500   9.329  -1.359   0.224  C2   0YL  18  
R4B  C3   C3   C   0  1  Y  N  N    2.998  23.144   -7.706  10.687  -2.510   1.829  C3   0YL  19  
R4B  C4   C4   C   0  1  Y  N  N    2.328  24.290   -7.303   9.561  -3.112   2.361  C4   0YL  20  
R4B  C5   C5   C   0  1  Y  N  N    0.974  24.216   -7.003   8.315  -2.841   1.833  C5   0YL  21  
R4B  C6   C6   C   0  1  Y  N  N    0.280  23.012   -7.118   8.193  -1.963   0.757  C6   0YL  22  
R4B  C18  C18  C   0  1  N  N  N   -9.253  25.559   -1.801  -2.752  -0.392  -0.726  C18  0YL  23  
R4B  P1   P1   P   0  1  N  N  N   -8.764  24.848   -0.202  -2.971  -1.907   0.264  P1   0YL  24  
R4B  O2   O2   O   0  1  N  N  N   -7.326  25.237    0.062  -2.414  -1.660   1.754  O2   0YL  25  
R4B  O3   O3   O   0  1  N  N  N   -9.067  23.373   -0.197  -2.222  -3.019  -0.364  O3   0YL  26  
R4B  C19  C19  C   0  1  Y  N  N   -9.778  25.593    1.006  -4.733  -2.332   0.339  C19  0YL  27  
R4B  C20  C20  C   0  1  Y  N  N   -9.211  25.949    2.218  -5.286  -3.157  -0.622  C20  0YL  28  
R4B  C21  C21  C   0  1  Y  N  N  -10.000  26.534    3.203  -6.629  -3.480  -0.566  C21  0YL  29  
R4B  C22  C22  C   0  1  Y  N  N  -11.347  26.744    2.964  -7.419  -2.978   0.453  C22  0YL  30  
R4B  BR1  BR1  BR  0  0  N  N  N  -12.374  27.544    4.351  -9.255  -3.421   0.532  BR1  0YL  31  
R4B  C23  C23  C   0  1  Y  N  N  -11.921  26.372    1.750  -6.864  -2.152   1.415  C23  0YL  32  
R4B  C24  C24  C   0  1  Y  N  N  -11.134  25.794    0.756  -5.520  -1.834   1.360  C24  0YL  33  
R4B  N2   N2   N   0  1  N  N  N   -7.981  27.501   -4.161  -1.579   2.363  -0.545  N    ALA  34  
R4B  C26  C26  C   0  1  N  N  S   -8.469  28.501   -5.106  -1.412   3.751  -0.982  CA   ALA  35  
R4B  C30  C30  C   0  1  N  N  N   -7.764  28.438   -6.461  -1.461   4.665   0.216  C    ALA  36  
R4B  O7   O7   O   0  1  N  N  N   -6.602  28.025   -6.558  -1.620   4.202   1.325  O    ALA  37  
R4B  C27  C27  C   0  1  N  N  N   -8.356  29.892   -4.507  -2.537   4.120  -1.951  CB   ALA  38  
R4B  N3   N3   N   0  1  N  N  N   -8.474  28.834   -7.512  -1.328   5.996   0.054  N    ALA  39  
R4B  C31  C31  C   0  1  N  N  S   -7.846  28.979   -8.815  -1.376   6.884   1.218  CA   ALA  40  
R4B  C35  C35  C   0  1  N  N  N   -6.769  30.060   -8.719  -1.816   8.258   0.784  C    ALA  41  
R4B  O10  O10  O   0  1  N  N  N   -5.602  29.827   -9.049  -2.065   8.475  -0.383  O    ALA  42  
R4B  C32  C32  C   0  1  N  N  N   -8.885  29.338   -9.875   0.014   6.970   1.852  CB   ALA  43  
R4B  N4   N4   N   0  1  N  N  N   -7.165  31.238   -8.245  -1.933   9.247   1.693  N    NH2  44  
R4B  H1   H1   H   0  1  N  N  N   -7.195  25.714   -2.530  -0.781  -0.207   0.125  H10  0YL  45  
R4B  H2   H2   H   0  1  N  N  N   -9.165  23.960   -4.058  -0.837  -2.043  -1.601  H8   0YL  46  
R4B  H3   H3   H   0  1  N  N  N   -8.316  23.359   -2.593  -1.018  -0.796  -2.859  H9   0YL  47  
R4B  H4   H4   H   0  1  N  N  N   -5.263  24.759   -3.874   1.587  -2.058  -0.229  H7   0YL  48  
R4B  H5   H5   H   0  1  N  N  N   -4.194  21.632   -7.394   3.600  -2.478   0.597  H17  0YL  49  
R4B  H6   H6   H   0  1  N  N  N   -1.838  21.553   -8.183   5.813  -2.960   1.550  H18  0YL  50  
R4B  H7   H7   H   0  1  N  N  N   -0.769  24.430   -5.196   7.617  -0.324  -1.309  H5   0YL  51  
R4B  H8   H8   H   0  1  N  N  N   -3.108  24.510   -4.410   5.404   0.150  -2.267  H6   0YL  52  
R4B  H9   H9   H   0  1  N  N  N    0.432  20.916   -7.561   9.240  -0.678  -0.609  H1   0YL  53  
R4B  H10  H10  H   0  1  N  N  N    4.051  23.189   -7.943  11.660  -2.725   2.245  H2   0YL  54  
R4B  H11  H11  H   0  1  N  N  N    2.854  25.230   -7.223   9.657  -3.796   3.191  H3   0YL  55  
R4B  H12  H12  H   0  1  N  N  N    0.452  25.103   -6.676   7.437  -3.312   2.249  H4   0YL  56  
R4B  H13  H13  H   0  1  N  N  N   -9.482  26.624   -1.645  -3.264   0.437  -0.239  H12  0YL  57  
R4B  H14  H14  H   0  1  N  N  N  -10.157  25.036   -2.145  -3.171  -0.544  -1.721  H11  0YL  58  
R4B  H15  H15  H   0  1  N  N  N   -6.805  24.454    0.198  -2.860  -0.943   2.227  H31  0YL  59  
R4B  H16  H16  H   0  1  N  N  N   -8.161  25.773    2.398  -4.670  -3.548  -1.418  H13  0YL  60  
R4B  H17  H17  H   0  1  N  N  N   -9.564  26.822    4.148  -7.062  -4.124  -1.317  H14  0YL  61  
R4B  H18  H18  H   0  1  N  N  N  -12.975  26.532    1.580  -7.481  -1.760   2.210  H15  0YL  62  
R4B  H19  H19  H   0  1  N  N  N  -11.567  25.507   -0.191  -5.086  -1.193   2.114  H16  0YL  63  
R4B  H20  H20  H   0  1  N  N  N   -7.150  27.674   -3.633  -2.044   2.168   0.285  H    ALA  64  
R4B  H21  H21  H   0  1  N  N  N   -9.537  28.308   -5.286  -0.450   3.861  -1.483  HA   ALA  65  
R4B  H22  H22  H   0  1  N  N  N   -8.869  29.916   -3.534  -2.412   5.153  -2.276  HB1  ALA  66  
R4B  H23  H23  H   0  1  N  N  N   -7.295  30.146   -4.368  -2.501   3.460  -2.817  HB2  ALA  67  
R4B  H24  H24  H   0  1  N  N  N   -8.822  30.622   -5.185  -3.498   4.011  -1.450  HB3  ALA  68  
R4B  H25  H25  H   0  1  N  N  N   -9.448  29.034   -7.406  -1.200   6.366  -0.833  H    ALA  69  
R4B  H26  H26  H   0  1  N  N  N   -7.367  28.031   -9.101  -2.083   6.489   1.947  HA   ALA  70  
R4B  H27  H27  H   0  1  N  N  N   -9.647  28.547   -9.925   0.722   7.365   1.122  HB1  ALA  71  
R4B  H28  H28  H   0  1  N  N  N   -9.364  30.292   -9.610  -0.021   7.630   2.718  HB2  ALA  72  
R4B  H29  H29  H   0  1  N  N  N   -8.392  29.434  -10.854   0.333   5.976   2.165  HB3  ALA  73  
R4B  H30  H30  H   0  1  N  N  N   -6.506  31.983   -8.143  -1.733   9.074   2.626  HN1  NH2  74  
R4B  H31  H31  H   0  1  N  N  N   -8.122  31.379   -7.991  -2.216  10.131   1.413  HN2  NH2  75  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R4B  C32  C31  SING  N  N   1  
R4B  O10  C35  DOUB  N  N   2  
R4B  C31  C35  SING  N  N   3  
R4B  C31  N3   SING  N  N   4  
R4B  C35  N4   SING  N  N   5  
R4B  CL1  C1   SING  N  N   6  
R4B  C1   C3   DOUB  Y  N   7  
R4B  C1   C2   SING  Y  N   8  
R4B  C3   C4   SING  Y  N   9  
R4B  N3   C30  SING  N  N  10  
R4B  C2   C6   DOUB  Y  N  11  
R4B  C10  C11  DOUB  Y  N  12  
R4B  C10  C7   SING  Y  N  13  
R4B  C4   C5   DOUB  Y  N  14  
R4B  C6   C5   SING  Y  N  15  
R4B  C6   C7   SING  N  N  16  
R4B  C11  C12  SING  Y  N  17  
R4B  C7   C8   DOUB  Y  N  18  
R4B  O7   C30  DOUB  N  N  19  
R4B  C30  C26  SING  N  N  20  
R4B  C12  C13  SING  N  N  21  
R4B  C12  C9   DOUB  Y  N  22  
R4B  N1   C13  DOUB  Y  N  23  
R4B  N1   O1   SING  Y  N  24  
R4B  C8   C9   SING  Y  N  25  
R4B  C13  C14  SING  Y  N  26  
R4B  O1   C15  SING  Y  N  27  
R4B  C26  C27  SING  N  N  28  
R4B  C26  N2   SING  N  N  29  
R4B  O4   C25  DOUB  N  N  30  
R4B  C14  C15  DOUB  Y  N  31  
R4B  C15  C16  SING  N  N  32  
R4B  N2   C25  SING  N  N  33  
R4B  C25  C17  SING  N  N  34  
R4B  C16  C17  SING  N  N  35  
R4B  C17  C18  SING  N  N  36  
R4B  C18  P1   SING  N  N  37  
R4B  P1   O3   DOUB  N  N  38  
R4B  P1   O2   SING  N  N  39  
R4B  P1   C19  SING  N  N  40  
R4B  C24  C19  DOUB  Y  N  41  
R4B  C24  C23  SING  Y  N  42  
R4B  C19  C20  SING  Y  N  43  
R4B  C23  C22  DOUB  Y  N  44  
R4B  C20  C21  DOUB  Y  N  45  
R4B  C22  C21  SING  Y  N  46  
R4B  C22  BR1  SING  N  N  47  
R4B  C17  H1   SING  N  N  48  
R4B  C16  H2   SING  N  N  49  
R4B  C16  H3   SING  N  N  50  
R4B  C14  H4   SING  N  N  51  
R4B  C11  H5   SING  N  N  52  
R4B  C10  H6   SING  N  N  53  
R4B  C8   H7   SING  N  N  54  
R4B  C9   H8   SING  N  N  55  
R4B  C2   H9   SING  N  N  56  
R4B  C3   H10  SING  N  N  57  
R4B  C4   H11  SING  N  N  58  
R4B  C5   H12  SING  N  N  59  
R4B  C18  H13  SING  N  N  60  
R4B  C18  H14  SING  N  N  61  
R4B  O2   H15  SING  N  N  62  
R4B  C20  H16  SING  N  N  63  
R4B  C21  H17  SING  N  N  64  
R4B  C23  H18  SING  N  N  65  
R4B  C24  H19  SING  N  N  66  
R4B  N2   H20  SING  N  N  67  
R4B  C26  H21  SING  N  N  68  
R4B  C27  H22  SING  N  N  69  
R4B  C27  H23  SING  N  N  70  
R4B  C27  H24  SING  N  N  71  
R4B  N3   H25  SING  N  N  72  
R4B  C31  H26  SING  N  N  73  
R4B  C32  H27  SING  N  N  74  
R4B  C32  H28  SING  N  N  75  
R4B  C32  H29  SING  N  N  76  
R4B  N4   H30  SING  N  N  77  
R4B  N4   H31  SING  N  N  78  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R4B  SMILES            ACDLabs               12.01  "O=C(N)C(NC(=O)C(NC(=O)C(CP(=O)(O)c1ccc(Br)cc1)Cc4onc(c3ccc(c2cccc(Cl)c2)cc3)c4)C)C"  
R4B  InChI             InChI                 1.03   "InChI=1S/C31H31BrClN4O6P/c1-18(29(34)38)35-30(39)19(2)36-31(40)23(17-44(41,42)27-12-10-24(32)11-13-27)15-26-16-28(37-43-26)21-8-6-20(7-9-21)22-4-3-5-25(33)14-22/h3-14,16,18-19,23H,15,17H2,1-2H3,(H2,34,38)(H,35,39)(H,36,40)(H,41,42)/t18-,19-,23+/m0/s1"  
R4B  InChIKey          InChI                 1.03   LIUMDGLYGBIKBM-SFYKDHMMSA-N  
R4B  SMILES_CANONICAL  CACTVS                3.370  "C[C@H](NC(=O)[C@H](C)NC(=O)[C@H](Cc1onc(c1)c2ccc(cc2)c3cccc(Cl)c3)C[P](O)(=O)c4ccc(Br)cc4)C(N)=O"  
R4B  SMILES            CACTVS                3.370  "C[CH](NC(=O)[CH](C)NC(=O)[CH](Cc1onc(c1)c2ccc(cc2)c3cccc(Cl)c3)C[P](O)(=O)c4ccc(Br)cc4)C(N)=O"  
R4B  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@@H](C(=O)N)NC(=O)[C@H](C)NC(=O)[C@H](Cc1cc(no1)c2ccc(cc2)c3cccc(c3)Cl)CP(=O)(c4ccc(cc4)Br)O"  
R4B  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(C(=O)N)NC(=O)C(C)NC(=O)C(Cc1cc(no1)c2ccc(cc2)c3cccc(c3)Cl)CP(=O)(c4ccc(cc4)Br)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R4B  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(2S)-3-[(R)-(4-bromophenyl)(hydroxy)phosphoryl]-2-{[3-(3'-chlorobiphenyl-4-yl)-1,2-oxazol-5-yl]methyl}propanoyl]-L-alanyl-L-alaninamide"  
R4B  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "[(2S)-3-[[(2S)-1-[[(2S)-1-azanyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-2-[[3-[4-(3-chlorophenyl)phenyl]-1,2-oxazol-5-yl]methyl]-3-oxidanylidene-propyl]-(4-bromophenyl)phosphinic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R4B  "Create component"  2012-10-04  RCSB  
R4B  "Initial release"   2013-02-01  RCSB  
R4B  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     R4B
_pdbx_chem_comp_synonyms.name        RXP470B
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
